RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C RIM11P38615 370 aa2.25□□□□□ -2.05
HIR3YJR140C VPS53P47061 822 aa2.25□□□□□ -2.05
HIR3YJR140C GCV1P48015 400 aa2.25□□□□□ -2.05
HIR3YJR140C PPT1P53043 513 aa2.25□□□□□ -2.05
HIR3YJR140C MTC5Q03897 1148 aa2.25□□□□□ -2.05
HIR3YJR140C GSY1P23337 708 aa2.24□□□□□ -2.05
HIR3YJR140C SCW11P53189 542 aa2.24□□□□□ -2.05
HIR3YJR140C YMR265CQ03508 461 aaKnown RBP2.24□□□□□ -2.05
HIR3YJR140C PHO8P11491 566 aa2.24□□□□□ -2.05
HIR3YJR140C DPB3P27344 201 aa2.24□□□□□ -2.05
HIR3YJR140C RGD1P38339 666 aa2.24□□□□□ -2.05
HIR3YJR140C BSD2P38356 321 aa2.24□□□□□ -2.05
HIR3YJR140C FAA3P39002 694 aa2.24□□□□□ -2.05
HIR3YJR140C SPO71Q03868 1245 aa2.24□□□□□ -2.05
HIR3YJR140C YDR461C-AQ2V2P7 80 aa2.24□□□□□ -2.05
HIR3YJR140C RAD4P14736 754 aa2.24□□□□□ -2.05
HIR3YJR140C SDH2P21801 266 aa2.24□□□□□ -2.05
HIR3YJR140C SFP1P32432 683 aa2.24□□□□□ -2.05
HIR3YJR140C SLA1P32790 1244 aa2.24□□□□□ -2.05
HIR3YJR140C VMS1Q04311 632 aaKnown RBP2.24□□□□□ -2.05
HIR3YJR140C COG8Q04632 607 aa2.24□□□□□ -2.05
HIR3YJR140C HRK1Q08732 759 aaKnown RBP2.24□□□□□ -2.05
HIR3YJR140C FPS1P23900 669 aa2.24□□□□□ -2.05
HIR3YJR140C MRC1P25588 1096 aa2.24□□□□□ -2.05
HIR3YJR140C EMG1Q06287 252 aaKnown RBP2.24□□□□□ -2.05
HIR3YJR140C YPL260WQ08977 551 aa2.24□□□□□ -2.05
HIR3YJR140C CDC19P00549 500 aaKnown RBP2.23□□□□□ -2.05
HIR3YJR140C CIT1P00890 479 aa2.23□□□□□ -2.05
HIR3YJR140C RPS31P05759 152 aaKnown RBP2.23□□□□□ -2.05
HIR3YJR140C TRK1P12685 1235 aa2.23□□□□□ -2.05
HIR3YJR140C KTR2P33550 425 aa2.23□□□□□ -2.05
HIR3YJR140C PBP2P38151 413 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
HIR3YJR140C XKS1P42826 600 aa2.23□□□□□ -2.05
HIR3YJR140C UTP22P53254 1237 aaPredicted RBP2.23□□□□□ -2.05
HIR3YJR140C SUB1P54000 292 aaKnown RBP2.23□□□□□ -2.05
HIR3YJR140C ITC1P53125 1264 aa2.23□□□□□ -2.05
HIR3YJR140C MON1P53129 644 aa2.23□□□□□ -2.05
HIR3YJR140C UTP8P53276 713 aaKnown RBP2.23□□□□□ -2.05
HIR3YJR140C UGO1Q03327 502 aa2.23□□□□□ -2.05
HIR3YJR140C EST2Q06163 884 aa2.23□□□□□ -2.05
HIR3YJR140C YIG1Q08956 461 aa2.23□□□□□ -2.05
HIR3YJR140C GLO4Q12320 285 aa2.23□□□□□ -2.05
HIR3YJR140C TCB1Q12466 1186 aa2.23□□□□□ -2.05
HIR3YJR140C DBP5P20449 482 aaKnown RBP2.23□□□□□ -2.05
HIR3YJR140C NPR1P22211 790 aa2.23□□□□□ -2.05
HIR3YJR140C GRX1P25373 110 aaKnown RBP2.23□□□□□ -2.05
HIR3YJR140C ADD66P36040 267 aa2.23□□□□□ -2.05
HIR3YJR140C CNN1P43618 361 aa2.23□□□□□ -2.05
HIR3YJR140C YGL140CP53120 1219 aa2.23□□□□□ -2.05
HIR3YJR140C TYW3P53177 273 aa2.23□□□□□ -2.05
HIR3YJR140C CIT2P08679 460 aa2.23□□□□□ -2.05
HIR3YJR140C SSB1P11484 613 aaKnown RBP2.23□□□□□ -2.05
HIR3YJR140C DIT1P21623 536 aa2.23□□□□□ -2.05
HIR3YJR140C BAS1P22035 811 aa2.23□□□□□ -2.05
HIR3YJR140C YKL107WP34251 309 aa2.23□□□□□ -2.05
HIR3YJR140C MRPL16P38064 232 aa2.23□□□□□ -2.05
HIR3YJR140C SSB2P40150 613 aaKnown RBP2.23□□□□□ -2.05
HIR3YJR140C NUP82P40368 713 aa2.23□□□□□ -2.05
HIR3YJR140C BRE2P43132 505 aa2.23□□□□□ -2.05
HIR3YJR140C FAA4P47912 694 aaKnown RBP2.23□□□□□ -2.05
HIR3YJR140C MEC3Q02574 474 aa2.23□□□□□ -2.05
HIR3YJR140C SAC7P17121 654 aa2.22□□□□□ -2.05
HIR3YJR140C SHM1P37292 490 aaPredicted RBP2.22□□□□□ -2.05
HIR3YJR140C CEM1P39525 442 aa2.22□□□□□ -2.05
HIR3YJR140C YNL165WP53891 406 aa2.22□□□□□ -2.05
HIR3YJR140C SRP1Q02821 542 aaKnown RBP2.22□□□□□ -2.05
HIR3YJR140C PPM2Q08282 695 aa2.22□□□□□ -2.05
HIR3YJR140C GNT1Q12096 491 aa2.22□□□□□ -2.05
HIR3YJR140C SYP1P25623 870 aaKnown RBP2.22□□□□□ -2.05
HIR3YJR140C MNN1P39106 762 aa2.22□□□□□ -2.05
HIR3YJR140C IOC3P43596 787 aa2.22□□□□□ -2.05
HIR3YJR140C LYS5P50113 272 aa2.22□□□□□ -2.05
HIR3YJR140C PEX13P80667 386 aa2.22□□□□□ -2.05
HIR3YJR140C FMP25Q08023 583 aa2.22□□□□□ -2.05
HIR3YJR140C AVO1Q08236 1176 aa2.22□□□□□ -2.05
HIR3YJR140C CMR1Q12510 522 aaKnown RBP2.22□□□□□ -2.05
HIR3YJR140C THI4P32318 326 aa2.22□□□□□ -2.05
HIR3YJR140C YEL1P34225 687 aa2.22□□□□□ -2.05
HIR3YJR140C BUD6P41697 788 aa2.22□□□□□ -2.05
HIR3YJR140C YGR125WP53273 1036 aa2.22□□□□□ -2.05
HIR3YJR140C BIO5P53744 561 aaKnown RBP2.22□□□□□ -2.05
HIR3YJR140C IOC4Q04213 475 aa2.22□□□□□ -2.05
HIR3YJR140C GCR1P07261 785 aa2.22□□□□□ -2.05
HIR3YJR140C SBP1P10080 294 aaKnown RBP2.22□□□□□ -2.05
HIR3YJR140C IDI1P15496 288 aa2.22□□□□□ -2.05
HIR3YJR140C MSH3P25336 1018 aa2.22□□□□□ -2.05
HIR3YJR140C RPC82P32349 654 aa2.22□□□□□ -2.05
HIR3YJR140C OSH7P38755 437 aa2.22□□□□□ -2.05
HIR3YJR140C RPN3P40016 523 aaKnown RBP2.22□□□□□ -2.05
HIR3YJR140C INP51P40559 946 aaKnown RBP2.22□□□□□ -2.05
HIR3YJR140C ENV11P53246 860 aa2.22□□□□□ -2.05
HIR3YJR140C FLC1Q08967 793 aa2.22□□□□□ -2.05
HIR3YJR140C TRP2P00899 507 aaKnown RBP2.21□□□□□ -2.06
HIR3YJR140C RPP2AP05319 106 aaKnown RBP2.21□□□□□ -2.06
HIR3YJR140C HTS1P07263 546 aaKnown RBP2.21□□□□□ -2.06
HIR3YJR140C DLD1P32891 587 aa2.21□□□□□ -2.06
HIR3YJR140C TOM20P35180 183 aa2.21□□□□□ -2.06
HIR3YJR140C PIC2P40035 300 aa2.21□□□□□ -2.06
HIR3YJR140C NEO1P40527 1151 aa2.21□□□□□ -2.06
HIR3YJR140C HUL5P53119 910 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms