RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C TDA6Q06466 467 aa5.94□□□□□ -1.46
VPS25YJR102C TY4B-PA0A0B7P3V8 1104 aa5.93□□□□□ -1.46
VPS25YJR102C MSH3P25336 1018 aa5.93□□□□□ -1.46
VPS25YJR102C PET112P33893 541 aa5.93□□□□□ -1.46
VPS25YJR102C PEX28P38848 579 aa5.93□□□□□ -1.46
VPS25YJR102C UTP22P53254 1237 aaPredicted RBP5.93□□□□□ -1.46
VPS25YJR102C RMD1Q03441 430 aa5.93□□□□□ -1.46
VPS25YJR102C ELG1Q12050 791 aa5.93□□□□□ -1.46
VPS25YJR102C TY4A-HQ6Q5P6 413 aa5.93□□□□□ -1.46
VPS25YJR102C POL5P39985 1022 aaKnown RBP5.92□□□□□ -1.46
VPS25YJR102C SVF1Q05515 481 aa5.92□□□□□ -1.46
VPS25YJR102C MAE1P36013 669 aaKnown RBP5.91□□□□□ -1.46
VPS25YJR102C PIC2P40035 300 aa5.91□□□□□ -1.46
VPS25YJR102C MAD1P40957 749 aa5.91□□□□□ -1.46
VPS25YJR102C DSE4P53753 1117 aa5.91□□□□□ -1.46
VPS25YJR102C FAR11P53917 953 aa5.91□□□□□ -1.46
VPS25YJR102C YIG1Q08956 461 aa5.91□□□□□ -1.46
VPS25YJR102C ERS1P17261 260 aa5.9□□□□□ -1.46
VPS25YJR102C NAP1P25293 417 aaKnown RBP5.9□□□□□ -1.46
VPS25YJR102C ATG14P38270 344 aa5.9□□□□□ -1.46
VPS25YJR102C EXO5P38289 585 aa5.9□□□□□ -1.46
VPS25YJR102C XKS1P42826 600 aa5.9□□□□□ -1.46
VPS25YJR102C YFL066CP43538 392 aa5.9□□□□□ -1.46
VPS25YJR102C NOG1Q02892 647 aaKnown RBP5.9□□□□□ -1.46
VPS25YJR102C GAS5Q08193 484 aa5.9□□□□□ -1.46
VPS25YJR102C TY1A-LR4P0C2I8 440 aaKnown RBP5.89□□□□□ -1.47
VPS25YJR102C TY1A-DR6P0CX70 440 aa5.89□□□□□ -1.47
VPS25YJR102C TY1A-ER1P0CX71 440 aa5.89□□□□□ -1.47
VPS25YJR102C TY1A-LR2P0CX72 440 aa5.89□□□□□ -1.47
VPS25YJR102C TY1A-PLP0CX73 440 aa5.89□□□□□ -1.47
VPS25YJR102C TY1A-JR1P0CX74 440 aa5.89□□□□□ -1.47
VPS25YJR102C TY1A-LR3P0CX75 440 aa5.89□□□□□ -1.47
VPS25YJR102C TY1A-ML2P0CX76 440 aa5.89□□□□□ -1.47
VPS25YJR102C MTR4P47047 1073 aaKnown RBP5.89□□□□□ -1.47
VPS25YJR102C MRL1Q06815 381 aa5.89□□□□□ -1.47
VPS25YJR102C TY1A-GR1Q12085 440 aa5.89□□□□□ -1.47
VPS25YJR102C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.89□□□□□ -1.47
VPS25YJR102C TY1A-OLQ92392 440 aaKnown RBP5.89□□□□□ -1.47
VPS25YJR102C MCX1P38323 520 aaPredicted RBP5.88□□□□□ -1.47
VPS25YJR102C REI1P38344 393 aaPredicted RBP5.88□□□□□ -1.47
VPS25YJR102C PRY1P47032 299 aa5.88□□□□□ -1.47
VPS25YJR102C GCV1P48015 400 aa5.88□□□□□ -1.47
VPS25YJR102C KIP3P53086 805 aaKnown RBP5.88□□□□□ -1.47
VPS25YJR102C YGL140CP53120 1219 aa5.88□□□□□ -1.47
VPS25YJR102C YMR187CQ03236 431 aa5.88□□□□□ -1.47
VPS25YJR102C ALG6Q12001 544 aaKnown RBP5.88□□□□□ -1.47
VPS25YJR102C YLL054CQ12244 843 aa5.88□□□□□ -1.47
VPS25YJR102C DED1P06634 604 aaKnown RBP5.87□□□□□ -1.47
VPS25YJR102C CLN2P20438 545 aa5.87□□□□□ -1.47
VPS25YJR102C SLS1P42900 643 aa5.87□□□□□ -1.47
VPS25YJR102C MEC3Q02574 474 aa5.87□□□□□ -1.47
VPS25YJR102C PHM7Q12252 991 aa5.87□□□□□ -1.47
VPS25YJR102C YPR053CQ6Q5F3 151 aa5.87□□□□□ -1.47
VPS25YJR102C NEM1P38757 446 aa5.86□□□□□ -1.47
VPS25YJR102C BUD9P53226 547 aa5.86□□□□□ -1.47
VPS25YJR102C YNR063WP53749 607 aa5.86□□□□□ -1.47
VPS25YJR102C CWC24P53769 259 aa5.86□□□□□ -1.47
VPS25YJR102C AVO1Q08236 1176 aa5.86□□□□□ -1.47
VPS25YJR102C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
VPS25YJR102C GCR1P07261 785 aa5.85□□□□□ -1.47
VPS25YJR102C SEC23P15303 768 aaKnown RBP5.85□□□□□ -1.47
VPS25YJR102C VMA4P22203 233 aaKnown RBP5.85□□□□□ -1.47
VPS25YJR102C MNR2P35724 969 aa5.85□□□□□ -1.47
VPS25YJR102C TAT1P38085 619 aa5.85□□□□□ -1.47
VPS25YJR102C YOR223WQ12015 292 aa5.85□□□□□ -1.47
VPS25YJR102C TY1A-NL1Q12391 440 aaKnown RBP5.85□□□□□ -1.47
VPS25YJR102C RSC6P25632 483 aa5.84□□□□□ -1.47
VPS25YJR102C RAD27P26793 382 aa5.84□□□□□ -1.47
VPS25YJR102C SLN1P39928 1220 aaPredicted RBP5.84□□□□□ -1.47
VPS25YJR102C ICP55P40051 511 aa5.84□□□□□ -1.47
VPS25YJR102C SPO74P45819 413 aa5.84□□□□□ -1.47
VPS25YJR102C DOT1Q04089 582 aaKnown RBP5.84□□□□□ -1.47
VPS25YJR102C UTP5Q04177 643 aaKnown RBP5.84□□□□□ -1.47
VPS25YJR102C HDA2Q06629 674 aa5.84□□□□□ -1.47
VPS25YJR102C PUS1Q12211 544 aaKnown RBP5.84□□□□□ -1.47
VPS25YJR102C YDR215CQ12240 137 aa5.84□□□□□ -1.47
VPS25YJR102C AI3P03877 415 aa5.83□□□□□ -1.48
VPS25YJR102C SFA1P32771 386 aa5.83□□□□□ -1.48
VPS25YJR102C ARL1P38116 183 aaKnown RBP5.83□□□□□ -1.48
VPS25YJR102C VAC8P39968 578 aa5.83□□□□□ -1.48
VPS25YJR102C VPS16Q03308 798 aa5.83□□□□□ -1.48
VPS25YJR102C EST2Q06163 884 aa5.83□□□□□ -1.48
VPS25YJR102C RTT10Q08924 1013 aa5.83□□□□□ -1.48
VPS25YJR102C HEM13P11353 328 aaKnown RBP5.82□□□□□ -1.48
VPS25YJR102C TAF13P11747 167 aa5.82□□□□□ -1.48
VPS25YJR102C ELA1P53861 379 aaPredicted RBP5.82□□□□□ -1.48
VPS25YJR102C ALD6P54115 500 aaKnown RBP5.82□□□□□ -1.48
VPS25YJR102C PIN2Q12057 282 aa5.82□□□□□ -1.48
VPS25YJR102C REC8Q12188 680 aa5.82□□□□□ -1.48
VPS25YJR102C CDC34P14682 295 aa5.81□□□□□ -1.48
VPS25YJR102C YCK2P23292 546 aaKnown RBP5.81□□□□□ -1.48
VPS25YJR102C ADD66P36040 267 aa5.81□□□□□ -1.48
VPS25YJR102C YAR028WP39548 234 aa5.81□□□□□ -1.48
VPS25YJR102C ROD1Q02805 837 aa5.81□□□□□ -1.48
VPS25YJR102C GDE1Q02979 1223 aa5.81□□□□□ -1.48
VPS25YJR102C GPT2P36148 743 aa5.8□□□□□ -1.48
VPS25YJR102C RDH54P38086 958 aa5.8□□□□□ -1.48
VPS25YJR102C AKR1P39010 764 aa5.8□□□□□ -1.48
VPS25YJR102C YGR045CP53229 120 aa5.8□□□□□ -1.48
VPS25YJR102C NCE103P53615 221 aa5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 127.6 ms