RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B HCM1P25364 564 aa2.4□□□□□ -2.03
SBH1YER087C-B YBR287WP38355 427 aa2.4□□□□□ -2.03
SBH1YER087C-B AIM21P40563 679 aa2.4□□□□□ -2.03
SBH1YER087C-B ELA1P53861 379 aaPredicted RBP2.4□□□□□ -2.03
SBH1YER087C-B RGD2P43556 714 aa2.39□□□□□ -2.03
SBH1YER087C-B YOR352WQ08816 343 aa2.39□□□□□ -2.03
SBH1YER087C-B TIF1P10081 395 aaKnown RBP2.38□□□□□ -2.03
SBH1YER087C-B NMD3P38861 518 aaKnown RBP2.38□□□□□ -2.03
SBH1YER087C-B HXT8P40886 569 aa2.38□□□□□ -2.03
SBH1YER087C-B GCV1P48015 400 aa2.38□□□□□ -2.03
SBH1YER087C-B GAL2P13181 574 aa2.37□□□□□ -2.03
SBH1YER087C-B PYC2P32327 1180 aaKnown RBP2.37□□□□□ -2.03
SBH1YER087C-B AIM26P32858 118 aa2.36□□□□□ -2.03
SBH1YER087C-B REI1P38344 393 aaPredicted RBP2.36□□□□□ -2.03
SBH1YER087C-B ATG32P40458 529 aa2.36□□□□□ -2.03
SBH1YER087C-B YDR132CQ03900 495 aa2.36□□□□□ -2.03
SBH1YER087C-B SMY2P32909 740 aaKnown RBP2.35□□□□□ -2.03
SBH1YER087C-B ATF1P40353 525 aa2.35□□□□□ -2.03
SBH1YER087C-B PHO23P50947 330 aa2.35□□□□□ -2.03
SBH1YER087C-B MCM6P53091 1017 aaKnown RBP2.35□□□□□ -2.03
SBH1YER087C-B TPP1Q03796 238 aa2.35□□□□□ -2.03
SBH1YER087C-B PPM2Q08282 695 aa2.35□□□□□ -2.03
SBH1YER087C-B MEF2P39677 819 aa2.34□□□□□ -2.03
SBH1YER087C-B BIM1P40013 344 aa2.34□□□□□ -2.03
SBH1YER087C-B SUT1P53032 299 aaKnown RBP2.34□□□□□ -2.03
SBH1YER087C-B GCN5Q03330 439 aa2.34□□□□□ -2.03
SBH1YER087C-B ROT1Q03691 256 aa2.34□□□□□ -2.03
SBH1YER087C-B TIF6Q12522 245 aaKnown RBP2.34□□□□□ -2.03
SBH1YER087C-B CHS7P38843 316 aa2.33□□□□□ -2.04
SBH1YER087C-B LAM1P38851 1228 aa2.33□□□□□ -2.04
SBH1YER087C-B RPL34BP40525 121 aaKnown RBP2.33□□□□□ -2.04
SBH1YER087C-B ALD4P46367 519 aaKnown RBP2.33□□□□□ -2.04
SBH1YER087C-B YGR045CP53229 120 aa2.33□□□□□ -2.04
SBH1YER087C-B ECM23Q02710 187 aa2.33□□□□□ -2.04
SBH1YER087C-B TMA10Q06177 86 aa2.33□□□□□ -2.04
SBH1YER087C-B PUS7Q08647 676 aaKnown RBP2.33□□□□□ -2.04
SBH1YER087C-B YIG1Q08956 461 aa2.33□□□□□ -2.04
SBH1YER087C-B NTO1Q12311 748 aa2.33□□□□□ -2.04
SBH1YER087C-B KIN4Q01919 800 aa2.32□□□□□ -2.04
SBH1YER087C-B MEC3Q02574 474 aa2.32□□□□□ -2.04
SBH1YER087C-B SGD1Q06132 899 aa2.32□□□□□ -2.04
SBH1YER087C-B AVO1Q08236 1176 aa2.32□□□□□ -2.04
SBH1YER087C-B PMI40P29952 429 aaKnown RBP2.31□□□□□ -2.04
SBH1YER087C-B NNK1P36003 928 aa2.31□□□□□ -2.04
SBH1YER087C-B YHL012WP38709 493 aa2.31□□□□□ -2.04
SBH1YER087C-B RAD55P38953 406 aa2.31□□□□□ -2.04
SBH1YER087C-B HTS1P07263 546 aaKnown RBP2.3□□□□□ -2.04
SBH1YER087C-B UBX7P38349 436 aa2.3□□□□□ -2.04
SBH1YER087C-B NTA1P40354 457 aa2.3□□□□□ -2.04
SBH1YER087C-B UBA2P52488 636 aa2.3□□□□□ -2.04
SBH1YER087C-B UBP3Q01477 912 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
SBH1YER087C-B PSY2P40164 858 aa2.29□□□□□ -2.04
SBH1YER087C-B SAM35P14693 329 aa2.28□□□□□ -2.04
SBH1YER087C-B PUF4P25339 888 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
SBH1YER087C-B LST4P34239 828 aa2.28□□□□□ -2.04
SBH1YER087C-B MNN10P50108 393 aaKnown RBP2.28□□□□□ -2.04
SBH1YER087C-B UTP22P53254 1237 aaPredicted RBP2.28□□□□□ -2.04
SBH1YER087C-B CYC1P00044 109 aaPredicted RBP2.27□□□□□ -2.05
SBH1YER087C-B KTR2P33550 425 aa2.27□□□□□ -2.05
SBH1YER087C-B PUN1Q06991 263 aa2.27□□□□□ -2.05
SBH1YER087C-B NPR1P22211 790 aa2.26□□□□□ -2.05
SBH1YER087C-B IRS4P36115 615 aaKnown RBP2.26□□□□□ -2.05
SBH1YER087C-B PLB2Q03674 706 aa2.26□□□□□ -2.05
SBH1YER087C-B SPS1P08458 490 aa2.25□□□□□ -2.05
SBH1YER087C-B MDL2P33311 773 aa2.25□□□□□ -2.05
SBH1YER087C-B CUE2P36075 443 aaKnown RBP2.25□□□□□ -2.05
SBH1YER087C-B MOH1P38191 138 aa2.25□□□□□ -2.05
SBH1YER087C-B MSS4P38994 779 aa2.25□□□□□ -2.05
SBH1YER087C-B PEX2P32800 271 aa2.24□□□□□ -2.05
SBH1YER087C-B YAP7Q08182 245 aa2.24□□□□□ -2.05
SBH1YER087C-B RPB10P22139 70 aa2.23□□□□□ -2.05
SBH1YER087C-B OAR1P35731 278 aa2.23□□□□□ -2.05
SBH1YER087C-B TGL4P36165 910 aa2.23□□□□□ -2.05
SBH1YER087C-B CTR9P89105 1077 aa2.23□□□□□ -2.05
SBH1YER087C-B DUS4Q06063 367 aa2.23□□□□□ -2.05
SBH1YER087C-B CMR1Q12510 522 aaKnown RBP2.23□□□□□ -2.05
SBH1YER087C-B CDC20P26309 610 aa2.22□□□□□ -2.05
SBH1YER087C-B IOC3P43596 787 aa2.22□□□□□ -2.05
SBH1YER087C-B YLR257WQ06146 321 aaKnown RBP2.22□□□□□ -2.05
SBH1YER087C-B AFT2Q08957 416 aa2.22□□□□□ -2.05
SBH1YER087C-B COBP00163 385 aa2.21□□□□□ -2.06
SBH1YER087C-B DUR3P33413 735 aa2.21□□□□□ -2.06
SBH1YER087C-B URN1Q06525 465 aaKnown RBP2.21□□□□□ -2.06
SBH1YER087C-B ACK1Q07622 623 aaPredicted RBP2.21□□□□□ -2.06
SBH1YER087C-B TY1A-LR4P0C2I8 440 aaKnown RBP2.2□□□□□ -2.06
SBH1YER087C-B TY1A-DR6P0CX70 440 aa2.2□□□□□ -2.06
SBH1YER087C-B TY1A-ER1P0CX71 440 aa2.2□□□□□ -2.06
SBH1YER087C-B TY1A-LR2P0CX72 440 aa2.2□□□□□ -2.06
SBH1YER087C-B TY1A-PLP0CX73 440 aa2.2□□□□□ -2.06
SBH1YER087C-B TY1A-JR1P0CX74 440 aa2.2□□□□□ -2.06
SBH1YER087C-B TY1A-LR3P0CX75 440 aa2.2□□□□□ -2.06
SBH1YER087C-B TY1A-ML2P0CX76 440 aa2.2□□□□□ -2.06
SBH1YER087C-B RET1P22276 1149 aaKnown RBP2.2□□□□□ -2.06
SBH1YER087C-B DEF1P35732 738 aaKnown RBP2.2□□□□□ -2.06
SBH1YER087C-B ECM2P38241 364 aaKnown RBP2.2□□□□□ -2.06
SBH1YER087C-B RIM11P38615 370 aa2.2□□□□□ -2.06
SBH1YER087C-B RXT3Q07458 294 aa2.2□□□□□ -2.06
SBH1YER087C-B TY1A-GR1Q12085 440 aa2.2□□□□□ -2.06
SBH1YER087C-B TY1A-PR3Q6Q5H1 440 aaKnown RBP2.2□□□□□ -2.06
SBH1YER087C-B TY1A-OLQ92392 440 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms