RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W CAF20P12962 161 aaKnown RBP1.97□□□□□ -2.09
CFT1YDR301W SRP54P20424 541 aaKnown RBP1.97□□□□□ -2.09
CFT1YDR301W MAK31P23059 88 aa1.97□□□□□ -2.09
CFT1YDR301W SRO9P25567 434 aaKnown RBP1.97□□□□□ -2.09
CFT1YDR301W RPS7AP26786 190 aaKnown RBP1.97□□□□□ -2.09
CFT1YDR301W CST26P38226 397 aa1.97□□□□□ -2.09
CFT1YDR301W KEL1P38853 1164 aaKnown RBP1.97□□□□□ -2.09
CFT1YDR301W YIL089WP40500 205 aa1.97□□□□□ -2.09
CFT1YDR301W NET1P47035 1189 aa1.97□□□□□ -2.09
CFT1YDR301W HST1P53685 503 aa1.97□□□□□ -2.09
CFT1YDR301W NAF1P53919 492 aaKnown RBP1.97□□□□□ -2.09
CFT1YDR301W NUC1P08466 329 aa1.97□□□□□ -2.09
CFT1YDR301W SRS2P12954 1174 aa1.97□□□□□ -2.09
CFT1YDR301W ADP1P25371 1049 aa1.97□□□□□ -2.09
CFT1YDR301W IME2P32581 645 aa1.97□□□□□ -2.09
CFT1YDR301W AFG2P32794 780 aa1.97□□□□□ -2.09
CFT1YDR301W TIM23P32897 222 aa1.97□□□□□ -2.09
CFT1YDR301W MOT2P34909 587 aaKnown RBP1.97□□□□□ -2.09
CFT1YDR301W YIR042CP40586 236 aa1.97□□□□□ -2.09
CFT1YDR301W ROG3P43602 733 aa1.97□□□□□ -2.09
CFT1YDR301W YGL138CP53122 345 aa1.97□□□□□ -2.09
CFT1YDR301W PIL1P53252 339 aaKnown RBP1.97□□□□□ -2.09
CFT1YDR301W EST2Q06163 884 aa1.97□□□□□ -2.09
CFT1YDR301W ELG1Q12050 791 aa1.97□□□□□ -2.09
CFT1YDR301W RAM2P29703 316 aa1.97□□□□□ -2.09
CFT1YDR301W SLA1P32790 1244 aa1.97□□□□□ -2.09
CFT1YDR301W BCH2P36122 765 aa1.97□□□□□ -2.09
CFT1YDR301W MAL31P38156 614 aa1.97□□□□□ -2.09
CFT1YDR301W THI6P41835 540 aa1.97□□□□□ -2.09
CFT1YDR301W ATF2P53296 535 aa1.97□□□□□ -2.09
CFT1YDR301W UFD2P54860 961 aa1.97□□□□□ -2.09
CFT1YDR301W CST9Q06032 482 aa1.97□□□□□ -2.09
CFT1YDR301W UGA4P32837 571 aa1.96□□□□□ -2.09
CFT1YDR301W MDL2P33311 773 aa1.96□□□□□ -2.09
CFT1YDR301W STV1P37296 890 aa1.96□□□□□ -2.09
CFT1YDR301W BSD2P38356 321 aa1.96□□□□□ -2.09
CFT1YDR301W VID27P40157 782 aa1.96□□□□□ -2.09
CFT1YDR301W YMR147WP40218 223 aaKnown RBP1.96□□□□□ -2.09
CFT1YDR301W AIM21P40563 679 aa1.96□□□□□ -2.09
CFT1YDR301W DAK2P43550 591 aa1.96□□□□□ -2.09
CFT1YDR301W YKE2P52553 114 aa1.96□□□□□ -2.09
CFT1YDR301W CUE3P53137 624 aaKnown RBP1.96□□□□□ -2.09
CFT1YDR301W RET3P53600 189 aa1.96□□□□□ -2.09
CFT1YDR301W MDM1Q01846 1127 aa1.96□□□□□ -2.09
CFT1YDR301W GDE1Q02979 1223 aa1.96□□□□□ -2.09
CFT1YDR301W CWC15Q03772 175 aaKnown RBP1.96□□□□□ -2.09
CFT1YDR301W HRQ1Q05549 1077 aa1.96□□□□□ -2.09
CFT1YDR301W FUS2Q05670 677 aa1.96□□□□□ -2.09
CFT1YDR301W TFC6Q06339 672 aa1.96□□□□□ -2.09
CFT1YDR301W SUB2Q07478 446 aaKnown RBP1.96□□□□□ -2.09
CFT1YDR301W DSE3Q08729 430 aa1.96□□□□□ -2.09
CFT1YDR301W KEL3Q08979 651 aaPredicted RBP1.96□□□□□ -2.09
CFT1YDR301W SRF1Q12516 437 aa1.96□□□□□ -2.09
CFT1YDR301W COX6P00427 148 aa1.96□□□□□ -2.1
CFT1YDR301W KEX1P09620 729 aa1.96□□□□□ -2.1
CFT1YDR301W ALG1P16661 449 aa1.96□□□□□ -2.1
CFT1YDR301W CLB5P30283 435 aa1.96□□□□□ -2.1
CFT1YDR301W VPS24P36095 224 aaKnown RBP1.96□□□□□ -2.1
CFT1YDR301W TPS3P38426 1054 aaKnown RBP1.96□□□□□ -2.1
CFT1YDR301W FOL1P53848 824 aa1.96□□□□□ -2.1
CFT1YDR301W RPT6Q01939 405 aaKnown RBP1.96□□□□□ -2.1
CFT1YDR301W PMA1P05030 918 aaKnown RBP1.96□□□□□ -2.1
CFT1YDR301W CHO2P05374 869 aaKnown RBP1.96□□□□□ -2.1
CFT1YDR301W CKA2P19454 339 aa1.96□□□□□ -2.1
CFT1YDR301W BMH1P29311 267 aaKnown RBP1.96□□□□□ -2.1
CFT1YDR301W TGL1P34163 548 aa1.96□□□□□ -2.1
CFT1YDR301W RXT2P38255 430 aa1.96□□□□□ -2.1
CFT1YDR301W SLI15P38283 698 aa1.96□□□□□ -2.1
CFT1YDR301W ETP1P38748 585 aaKnown RBP1.96□□□□□ -2.1
CFT1YDR301W SQS1P53866 767 aaKnown RBP1.96□□□□□ -2.1
CFT1YDR301W YAF9P53930 226 aa1.96□□□□□ -2.1
CFT1YDR301W ISA1Q07821 250 aaPredicted RBP1.96□□□□□ -2.1
CFT1YDR301W DDP1Q99321 188 aaKnown RBP1.96□□□□□ -2.1
CFT1YDR301W TY1B-AO13527 1196 aaKnown RBP1.96□□□□□ -2.1
CFT1YDR301W RPL19AP0CX82 189 aaKnown RBP1.96□□□□□ -2.1
CFT1YDR301W RPL19BP0CX83 189 aaPredicted RBP1.96□□□□□ -2.1
CFT1YDR301W HPR1P17629 752 aaKnown RBP1.96□□□□□ -2.1
CFT1YDR301W SSA4P22202 642 aaKnown RBP1.96□□□□□ -2.1
CFT1YDR301W YKR018CP36114 725 aa1.96□□□□□ -2.1
CFT1YDR301W SLN1P39928 1220 aaPredicted RBP1.96□□□□□ -2.1
CFT1YDR301W LYS14P40971 790 aa1.96□□□□□ -2.1
CFT1YDR301W TRM44Q02648 567 aaKnown RBP1.96□□□□□ -2.1
CFT1YDR301W CUR1Q06469 252 aa1.96□□□□□ -2.1
CFT1YDR301W YBL029C-AQ3E756 94 aa1.96□□□□□ -2.1
CFT1YDR301W FOB1O13329 566 aa1.95□□□□□ -2.1
CFT1YDR301W CBP1P07252 654 aa1.95□□□□□ -2.1
CFT1YDR301W RPP1BP10622 106 aaKnown RBP1.95□□□□□ -2.1
CFT1YDR301W SWI4P25302 1093 aaKnown RBP1.95□□□□□ -2.1
CFT1YDR301W RME1P32338 300 aaKnown RBP1.95□□□□□ -2.1
CFT1YDR301W OCT1P35999 772 aa1.95□□□□□ -2.1
CFT1YDR301W ALD6P54115 500 aaKnown RBP1.95□□□□□ -2.1
CFT1YDR301W VIP1Q06685 1146 aaKnown RBP1.95□□□□□ -2.1
CFT1YDR301W ETT1Q08421 412 aaKnown RBP1.95□□□□□ -2.1
CFT1YDR301W TY3A-GQ12173 290 aa1.95□□□□□ -2.1
CFT1YDR301W TIP41Q12199 356 aa1.95□□□□□ -2.1
CFT1YDR301W TY3A-IQ99219 290 aa1.95□□□□□ -2.1
CFT1YDR301W LAA1P39526 2014 aa1.95□□□□□ -2.1
CFT1YDR301W MBR1P23493 339 aa1.95□□□□□ -2.1
CFT1YDR301W SPT5P27692 1063 aaKnown RBP1.95□□□□□ -2.1
CFT1YDR301W PRO3P32263 286 aaKnown RBP1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms