RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	RPS6B	P0CX38	236 aa	Predicted RBP	4.59	□□□□□ -1.67
YAL004W	YAL004W	GRS1	P38088	690 aa	Known RBP	4.59	□□□□□ -1.67
YAL004W	YAL004W	MGE1	P38523	228 aa		4.59	□□□□□ -1.67
YAL004W	YAL004W	PPX1	P38698	397 aa		4.59	□□□□□ -1.67
YAL004W	YAL004W	POL5	P39985	1022 aa	Known RBP	4.59	□□□□□ -1.67
YAL004W	YAL004W	TPM2	P40414	161 aa		4.59	□□□□□ -1.67
YAL004W	YAL004W	MLP2	P40457	1679 aa		4.59	□□□□□ -1.67
YAL004W	YAL004W	ALG12	P53730	551 aa		4.59	□□□□□ -1.67
YAL004W	YAL004W	POB3	Q04636	552 aa	Known RBP	4.59	□□□□□ -1.67
YAL004W	YAL004W	KAR5	Q04746	504 aa		4.59	□□□□□ -1.67
YAL004W	YAL004W	AOS1	Q06624	347 aa		4.59	□□□□□ -1.67
YAL004W	YAL004W	YTA6	P40328	754 aa		4.58	□□□□□ -1.68
YAL004W	YAL004W	CTH1	P47976	325 aa		4.58	□□□□□ -1.68
YAL004W	YAL004W	ECM23	Q02710	187 aa		4.58	□□□□□ -1.68
YAL004W	YAL004W	MRX10	Q05648	414 aa		4.58	□□□□□ -1.68
YAL004W	YAL004W	WHI5	Q12416	295 aa		4.58	□□□□□ -1.68
YAL004W	YAL004W	TY1B-JR2	P47100	1755 aa	Known RBP	4.58	□□□□□ -1.68
YAL004W	YAL004W	TY1B-ER2	Q03619	1755 aa		4.58	□□□□□ -1.68
YAL004W	YAL004W	TY1B-MR1	Q04214	1755 aa		4.58	□□□□□ -1.68
YAL004W	YAL004W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.58	□□□□□ -1.68
YAL004W	YAL004W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.58	□□□□□ -1.68
YAL004W	YAL004W	TY1B-NL1	Q12112	1755 aa		4.58	□□□□□ -1.68
YAL004W	YAL004W	TY1B-GR1	Q12141	1755 aa		4.58	□□□□□ -1.68
YAL004W	YAL004W	TY1B-BL	Q12490	1755 aa		4.58	□□□□□ -1.68
YAL004W	YAL004W	ARO1	P08566	1588 aa	Known RBP	4.57	□□□□□ -1.68
YAL004W	YAL004W	BNR1	P40450	1375 aa		4.57	□□□□□ -1.68
YAL004W	YAL004W	SFA1	P32771	386 aa		4.57	□□□□□ -1.68
YAL004W	YAL004W	ELM1	P32801	640 aa		4.57	□□□□□ -1.68
YAL004W	YAL004W	RRM3	P38766	723 aa		4.57	□□□□□ -1.68
YAL004W	YAL004W	VAC8	P39968	578 aa		4.57	□□□□□ -1.68
YAL004W	YAL004W	NOP2	P40991	618 aa	Known RBP	4.57	□□□□□ -1.68
YAL004W	YAL004W	RIM21	P48565	533 aa		4.57	□□□□□ -1.68
YAL004W	YAL004W	YOL057W	Q08225	711 aa		4.57	□□□□□ -1.68
YAL004W	YAL004W	YLR122C	Q12312	125 aa		4.57	□□□□□ -1.68
YAL004W	YAL004W	CIT2	P08679	460 aa		4.56	□□□□□ -1.68
YAL004W	YAL004W	PMC1	P38929	1173 aa	Predicted RBP	4.56	□□□□□ -1.68
YAL004W	YAL004W	MED7	Q08278	222 aa		4.56	□□□□□ -1.68
YAL004W	YAL004W	Q0182	Q9ZZW1	134 aa		4.56	□□□□□ -1.68
YAL004W	YAL004W	BUD3	P25558	1636 aa		4.56	□□□□□ -1.68
YAL004W	YAL004W	RPO21	P04050	1733 aa	Known RBP	4.55	□□□□□ -1.68
YAL004W	YAL004W	TRL1	P09880	827 aa	Known RBP	4.55	□□□□□ -1.68
YAL004W	YAL004W	UBX7	P38349	436 aa		4.55	□□□□□ -1.68
YAL004W	YAL004W	MDJ2	P42834	146 aa		4.55	□□□□□ -1.68
YAL004W	YAL004W	IOC3	P43596	787 aa		4.55	□□□□□ -1.68
YAL004W	YAL004W	KIP3	P53086	805 aa	Known RBP	4.55	□□□□□ -1.68
YAL004W	YAL004W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
YAL004W	YAL004W	YGR161W-C	Q3E744	92 aa		4.55	□□□□□ -1.68
YAL004W	YAL004W	PDR5	P33302	1511 aa	Known RBP	4.55	□□□□□ -1.68
YAL004W	YAL004W	TRM3	Q07527	1436 aa		4.55	□□□□□ -1.68
YAL004W	YAL004W	NTE1	Q04958	1679 aa		4.54	□□□□□ -1.68
YAL004W	YAL004W	SEC3	P33332	1336 aa	Known RBP	4.54	□□□□□ -1.68
YAL004W	YAL004W	MRP10	O75012	95 aa		4.54	□□□□□ -1.68
YAL004W	YAL004W	NTH2	P35172	780 aa		4.54	□□□□□ -1.68
YAL004W	YAL004W	PAF1	P38351	445 aa		4.54	□□□□□ -1.68
YAL004W	YAL004W	KTR7	P40504	517 aa		4.54	□□□□□ -1.68
YAL004W	YAL004W	YNR040W	P53736	256 aa		4.54	□□□□□ -1.68
YAL004W	YAL004W	ALD3	P54114	506 aa		4.54	□□□□□ -1.68
YAL004W	YAL004W	ALD6	P54115	500 aa	Known RBP	4.54	□□□□□ -1.68
YAL004W	YAL004W	RAV1	P47104	1357 aa		4.53	□□□□□ -1.68
YAL004W	YAL004W	RTC1	Q08281	1341 aa		4.53	□□□□□ -1.68
YAL004W	YAL004W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
YAL004W	YAL004W	GRX4	P32642	244 aa		4.53	□□□□□ -1.68
YAL004W	YAL004W	NCL1	P38205	684 aa	Known RBP	4.53	□□□□□ -1.68
YAL004W	YAL004W	MAD1	P40957	749 aa		4.53	□□□□□ -1.68
YAL004W	YAL004W	TY4A-J	P47023	414 aa		4.53	□□□□□ -1.68
YAL004W	YAL004W	YJL049W	P47048	450 aa		4.53	□□□□□ -1.68
YAL004W	YAL004W	YJR107W	P47145	328 aa		4.53	□□□□□ -1.68
YAL004W	YAL004W	YGL081W	P53156	320 aa		4.53	□□□□□ -1.68
YAL004W	YAL004W	YDL121C	Q07541	149 aa		4.53	□□□□□ -1.68
YAL004W	YAL004W	YBT1	P32386	1661 aa		4.52	□□□□□ -1.69
YAL004W	YAL004W	GAL11	P19659	1081 aa		4.52	□□□□□ -1.69
YAL004W	YAL004W	PEP12	P32854	288 aa		4.52	□□□□□ -1.69
YAL004W	YAL004W	KAE1	P36132	386 aa		4.52	□□□□□ -1.69
YAL004W	YAL004W	TOS1	P38288	455 aa		4.52	□□□□□ -1.69
YAL004W	YAL004W	AIM21	P40563	679 aa		4.52	□□□□□ -1.69
YAL004W	YAL004W	YFL034W	P43564	1073 aa		4.52	□□□□□ -1.69
YAL004W	YAL004W	MTO1	P53070	669 aa		4.52	□□□□□ -1.69
YAL004W	YAL004W	ATG1	P53104	897 aa		4.52	□□□□□ -1.69
YAL004W	YAL004W	CUS1	Q02554	436 aa	Predicted RBP	4.52	□□□□□ -1.69
YAL004W	YAL004W	RPN4	Q03465	531 aa		4.52	□□□□□ -1.69
YAL004W	YAL004W	NSE3	Q05541	303 aa		4.52	□□□□□ -1.69
YAL004W	YAL004W	UTP4	Q06679	776 aa	Known RBP	4.52	□□□□□ -1.69
YAL004W	YAL004W	BRE1	Q07457	700 aa	Known RBP	4.52	□□□□□ -1.69
YAL004W	YAL004W	WRS1	Q12109	432 aa	Known RBP	4.52	□□□□□ -1.69
YAL004W	YAL004W	YOR131C	Q12486	218 aa		4.52	□□□□□ -1.69
YAL004W	YAL004W	DRS2	P39524	1355 aa		4.52	□□□□□ -1.69
YAL004W	YAL004W	KAR1	P11927	433 aa		4.51	□□□□□ -1.69
YAL004W	YAL004W	GAL2	P13181	574 aa		4.51	□□□□□ -1.69
YAL004W	YAL004W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
YAL004W	YAL004W	COQ2	P32378	372 aa		4.51	□□□□□ -1.69
YAL004W	YAL004W	NGR1	P32831	672 aa	Known RBP	4.51	□□□□□ -1.69
YAL004W	YAL004W	GRX7	P38068	203 aa		4.51	□□□□□ -1.69
YAL004W	YAL004W	ENP1	P38333	483 aa	Known RBP	4.51	□□□□□ -1.69
YAL004W	YAL004W	KRI1	P42846	591 aa	Known RBP	4.51	□□□□□ -1.69
YAL004W	YAL004W	ECM16	Q04217	1267 aa	Known RBP	4.51	□□□□□ -1.69
YAL004W	YAL004W	TMA64	Q04600	565 aa	Known RBP	4.51	□□□□□ -1.69
YAL004W	YAL004W	CDC53	Q12018	815 aa	Known RBP	4.51	□□□□□ -1.69
YAL004W	YAL004W	MNL2	Q12205	849 aa		4.51	□□□□□ -1.69
YAL004W	YAL004W	SPO14	P36126	1683 aa		4.51	□□□□□ -1.69
YAL004W	YAL004W	RPC31	P17890	251 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms