RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 OVOS2Q6IE36 1432 aa23.63■■□□□ 1.37
PHGDH-234ENST00000642041 PARP4Q9UKK3 1724 aaKnown RBP23.63■■□□□ 1.37
PHGDH-234ENST00000642041 PROM2Q8N271 834 aa23.62■■□□□ 1.37
PHGDH-234ENST00000642041 WASLO00401 505 aaPredicted RBP23.61■■□□□ 1.37
PHGDH-234ENST00000642041 PEAK1Q9H792 1746 aa23.61■■□□□ 1.37
PHGDH-234ENST00000642041 ADGRB1O14514 1584 aa23.61■■□□□ 1.37
PHGDH-234ENST00000642041 SBF2Q86WG5 1849 aa23.6■■□□□ 1.37
PHGDH-234ENST00000642041 ATP7BP35670 1465 aa23.6■■□□□ 1.37
PHGDH-234ENST00000642041 MINK1Q8N4C8 1332 aaPredicted RBP23.59■■□□□ 1.37
PHGDH-234ENST00000642041 SGIP1Q9BQI5 828 aa23.59■■□□□ 1.37
PHGDH-234ENST00000642041 MTFR1LQ9H019 292 aa23.59■■□□□ 1.37
PHGDH-234ENST00000642041 TMF1P82094 1093 aa23.58■■□□□ 1.37
PHGDH-234ENST00000642041 NBPF1Q3BBV0 1214 aa23.58■■□□□ 1.37
PHGDH-234ENST00000642041 NUTM2GQ5VZR2 741 aa23.58■■□□□ 1.37
PHGDH-234ENST00000642041 CPDO75976 1380 aa23.57■■□□□ 1.36
PHGDH-234ENST00000642041 ST20-MTHFSA0A0A6YYL1 179 aa23.57■■□□□ 1.36
PHGDH-234ENST00000642041 STK32BQ9NY57 414 aa23.57■■□□□ 1.36
PHGDH-234ENST00000642041 KIF7Q2M1P5 1343 aa23.57■■□□□ 1.36
PHGDH-234ENST00000642041 PTF1AQ7RTS3 328 aa23.56■■□□□ 1.36
PHGDH-234ENST00000642041 LMO7Q8WWI1 1683 aa23.56■■□□□ 1.36
PHGDH-234ENST00000642041 SLC15A2Q16348 729 aa23.55■■□□□ 1.36
PHGDH-234ENST00000642041 TRAK1Q9UPV9 953 aa23.55■■□□□ 1.36
PHGDH-234ENST00000642041 MAP3K5Q99683 1374 aa23.54■■□□□ 1.36
PHGDH-234ENST00000642041 ARXQ96QS3 562 aa23.53■■□□□ 1.36
PHGDH-234ENST00000642041 KTN1Q86UP2 1357 aaKnown RBP23.52■■□□□ 1.36
PHGDH-234ENST00000642041 DDB1Q16531 1140 aa23.52■■□□□ 1.36
PHGDH-234ENST00000642041 GPR162Q16538 588 aa23.51■■□□□ 1.35
PHGDH-234ENST00000642041 TXNRD1Q16881 649 aa23.51■■□□□ 1.35
PHGDH-234ENST00000642041 CRB1P82279 1406 aa23.5■■□□□ 1.35
PHGDH-234ENST00000642041 COL5A2P05997 1499 aaPredicted RBP23.5■■□□□ 1.35
PHGDH-234ENST00000642041 NUDT16Q96DE0 195 aaKnown RBP23.5■■□□□ 1.35
PHGDH-234ENST00000642041 BCL9O00512 1426 aa23.5■■□□□ 1.35
PHGDH-234ENST00000642041 GOLGB1Q14789 3259 aaKnown RBP23.5■■□□□ 1.35
PHGDH-234ENST00000642041 ITSN1Q15811 1721 aa23.49■■□□□ 1.35
PHGDH-234ENST00000642041 USP19O94966 1318 aa23.48■■□□□ 1.35
PHGDH-234ENST00000642041 ABTB2Q8N961 1025 aa23.47■■□□□ 1.35
PHGDH-234ENST00000642041 SBNO2Q9Y2G9 1366 aa23.47■■□□□ 1.35
PHGDH-234ENST00000642041 LRRC37A3O60309 1634 aa23.47■■□□□ 1.35
PHGDH-234ENST00000642041 ARHGEF28Q8N1W1 1705 aaKnown RBP23.47■■□□□ 1.35
PHGDH-234ENST00000642041 POLR3AO14802 1390 aaPredicted RBP23.46■■□□□ 1.35
PHGDH-234ENST00000642041 GCP02774 474 aa23.45■■□□□ 1.34
PHGDH-234ENST00000642041 MARCH10Q8NA82 808 aaPredicted RBP23.45■■□□□ 1.34
PHGDH-234ENST00000642041 PUS7Q96PZ0 661 aaKnown RBP23.45■■□□□ 1.34
PHGDH-234ENST00000642041 AATKQ6ZMQ8 1374 aa23.44■■□□□ 1.34
PHGDH-234ENST00000642041 ACEP12821 1306 aa23.44■■□□□ 1.34
PHGDH-234ENST00000642041 NLRP13Q86W25 1043 aa23.42■■□□□ 1.34
PHGDH-234ENST00000642041 TESK2Q96S53 571 aa23.42■■□□□ 1.34
PHGDH-234ENST00000642041 SHANK3Q9BYB0 1731 aa23.42■■□□□ 1.34
PHGDH-234ENST00000642041 CENPJQ9HC77 1338 aaPredicted RBP23.41■■□□□ 1.34
PHGDH-234ENST00000642041 CDCA7Q9BWT1 371 aaPredicted RBP23.4■■□□□ 1.34
PHGDH-234ENST00000642041 QRICH2Q9H0J4 1663 aa23.39■■□□□ 1.34
PHGDH-234ENST00000642041 PLEKHG3A1L390 1219 aa23.39■■□□□ 1.33
PHGDH-234ENST00000642041 TOM1L2Q6ZVM7 507 aa23.39■■□□□ 1.33
PHGDH-234ENST00000642041 CCDC61Q9Y6R9 512 aa23.38■■□□□ 1.33
PHGDH-234ENST00000642041 CDK19Q9BWU1 502 aa23.37■■□□□ 1.33
PHGDH-234ENST00000642041 AKAP12Q02952 1782 aa23.37■■□□□ 1.33
PHGDH-234ENST00000642041 RALBP1Q15311 655 aa23.35■■□□□ 1.33
PHGDH-234ENST00000642041 PELP1Q8IZL8 1130 aaKnown RBP23.35■■□□□ 1.33
PHGDH-234ENST00000642041 PRKRIP1Q9H875 184 aaPredicted RBP23.35■■□□□ 1.33
PHGDH-234ENST00000642041 TOPAZ1Q8N9V7 1692 aa23.33■■□□□ 1.33
PHGDH-234ENST00000642041 ZBTB7CA1YPR0 619 aa23.33■■□□□ 1.33
PHGDH-234ENST00000642041 WNK3Q9BYP7 1800 aa23.33■■□□□ 1.32
PHGDH-234ENST00000642041 WDR17Q8IZU2 1322 aa23.33■■□□□ 1.32
PHGDH-234ENST00000642041 HSPA6P17066 643 aa23.32■■□□□ 1.32
PHGDH-234ENST00000642041 KLHL34Q8N239 644 aa23.31■■□□□ 1.32
PHGDH-234ENST00000642041 PAPPAQ13219 1627 aa23.3■■□□□ 1.32
PHGDH-234ENST00000642041 EXOC5O00471 708 aa23.3■■□□□ 1.32
PHGDH-234ENST00000642041 GRIN3BO60391 1043 aa23.3■■□□□ 1.32
PHGDH-234ENST00000642041 SLC16A10Q8TF71 515 aa23.3■■□□□ 1.32
PHGDH-234ENST00000642041 POLR3GLQ9BT43 218 aa23.3■■□□□ 1.32
PHGDH-234ENST00000642041 POLD1P28340 1107 aa23.29■■□□□ 1.32
PHGDH-234ENST00000642041 ZNF827Q17R98 1081 aa23.28■■□□□ 1.32
PHGDH-234ENST00000642041 AXIN2Q9Y2T1 843 aa23.28■■□□□ 1.32
PHGDH-234ENST00000642041 BRD4O60885 1362 aaPredicted RBP23.27■■□□□ 1.32
PHGDH-234ENST00000642041 COL18A1P39060 1754 aa23.27■■□□□ 1.32
PHGDH-234ENST00000642041 NLGN2Q8NFZ4 835 aa23.26■■□□□ 1.31
PHGDH-234ENST00000642041 CARD10Q9BWT7 1032 aa23.26■■□□□ 1.31
PHGDH-234ENST00000642041 ATP10DQ9P241 1426 aa23.25■■□□□ 1.31
PHGDH-234ENST00000642041 NLRP6P59044 892 aa23.25■■□□□ 1.31
PHGDH-234ENST00000642041 EVC2Q86UK5 1308 aa23.25■■□□□ 1.31
PHGDH-234ENST00000642041 NHSQ6T4R5 1651 aa23.24■■□□□ 1.31
PHGDH-234ENST00000642041 SLIT3O75094 1523 aa23.23■■□□□ 1.31
PHGDH-234ENST00000642041 COL24A1Q17RW2 1714 aa23.23■■□□□ 1.31
PHGDH-234ENST00000642041 YBX3P16989 372 aaKnown RBP eCLIP23.23■■□□□ 1.312e-7■□□□□ 10.4
PHGDH-234ENST00000642041 GPBP1L1Q9HC44 474 aaPredicted RBP23.23■■□□□ 1.31
PHGDH-234ENST00000642041 NPC1L1Q9UHC9 1359 aa23.23■■□□□ 1.31
PHGDH-234ENST00000642041 AKT1S1Q96B36 256 aa23.21■■□□□ 1.31
PHGDH-234ENST00000642041 ACSBG1Q96GR2 724 aa23.21■■□□□ 1.31
PHGDH-234ENST00000642041 LRRC4BQ9NT99 713 aa23.21■■□□□ 1.31
PHGDH-234ENST00000642041 KNSTRNQ9Y448 316 aa23.2■■□□□ 1.3
PHGDH-234ENST00000642041 TNS2Q63HR2 1409 aa23.19■■□□□ 1.3
PHGDH-234ENST00000642041 CSB-PGBD3P0DP91 1061 aa23.19■■□□□ 1.3
PHGDH-234ENST00000642041 USP6P35125 1406 aa23.18■■□□□ 1.3
PHGDH-234ENST00000642041 PPIP5K1Q6PFW1 1433 aa23.18■■□□□ 1.3
PHGDH-234ENST00000642041 PER1O15534 1290 aaPredicted RBP23.18■■□□□ 1.3
PHGDH-234ENST00000642041 QSER1Q2KHR3 1735 aa23.18■■□□□ 1.3
PHGDH-234ENST00000642041 CPSF1Q10570 1443 aaKnown RBP23.17■■□□□ 1.3
PHGDH-234ENST00000642041 ARHGEF25Q86VW2 580 aa23.17■■□□□ 1.3
PHGDH-234ENST00000642041 PANK3Q9H999 370 aa23.17■■□□□ 1.3
PHGDH-234ENST00000642041 PNPLA7Q6ZV29 1317 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms