RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 NFE2L2Q16236 605 aa24.13■■□□□ 1.45
CROCCP2-206ENST00000639594 USP19O94966 1318 aa24.13■■□□□ 1.45
CROCCP2-206ENST00000639594 AATKQ6ZMQ8 1374 aa24.12■■□□□ 1.45
CROCCP2-206ENST00000639594 SEC24BO95487 1268 aa24.12■■□□□ 1.45
CROCCP2-206ENST00000639594 PRR36Q9H6K5 1346 aa24.11■■□□□ 1.45
CROCCP2-206ENST00000639594 ITPRIPQ8IWB1 547 aa24.11■■□□□ 1.45
CROCCP2-206ENST00000639594 COG3Q96JB2 828 aa24.11■■□□□ 1.45
CROCCP2-206ENST00000639594 DAXXQ9UER7 740 aaPredicted RBP24.11■■□□□ 1.45
CROCCP2-206ENST00000639594 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.11■■□□□ 1.45
CROCCP2-206ENST00000639594 DDX19BQ9UMR2 479 aa24.1■■□□□ 1.45
CROCCP2-206ENST00000639594 ROBO2Q9HCK4 1378 aa24.1■■□□□ 1.45
CROCCP2-206ENST00000639594 RRS1Q15050 365 aaKnown RBP24.09■■□□□ 1.45
CROCCP2-206ENST00000639594 TMEM57Q8N5G2 664 aa24.09■■□□□ 1.45
CROCCP2-206ENST00000639594 THUMPD2Q9BTF0 503 aaKnown RBP24.09■■□□□ 1.45
CROCCP2-206ENST00000639594 PTPRUQ92729 1446 aa24.09■■□□□ 1.45
CROCCP2-206ENST00000639594 ALDH1L2Q3SY69 923 aa24.08■■□□□ 1.45
CROCCP2-206ENST00000639594 KIF16BQ96L93 1317 aa24.08■■□□□ 1.45
CROCCP2-206ENST00000639594 ZNF692Q9BU19 519 aaPredicted RBP24.06■■□□□ 1.44
CROCCP2-206ENST00000639594 IPO8O15397 1037 aaKnown RBP24.06■■□□□ 1.44
CROCCP2-206ENST00000639594 USP35Q9P2H5 1018 aa24.06■■□□□ 1.44
CROCCP2-206ENST00000639594 TOPAZ1Q8N9V7 1692 aa24.05■■□□□ 1.44
CROCCP2-206ENST00000639594 HDAC1Q13547 482 aaPredicted RBP24.05■■□□□ 1.44
CROCCP2-206ENST00000639594 NRKQ7Z2Y5 1582 aa24.04■■□□□ 1.44
CROCCP2-206ENST00000639594 ZBTB40Q9NUA8 1239 aa24.02■■□□□ 1.44
CROCCP2-206ENST00000639594 TBX22Q9Y458 520 aa24.02■■□□□ 1.44
CROCCP2-206ENST00000639594 VAMP4O75379 141 aa24.02■■□□□ 1.44
CROCCP2-206ENST00000639594 CALD1Q05682 793 aaKnown RBP24.02■■□□□ 1.44
CROCCP2-206ENST00000639594 BRPF1P55201 1214 aaPredicted RBP24.01■■□□□ 1.43
CROCCP2-206ENST00000639594 GNAI1P63096 354 aa24.01■■□□□ 1.43
CROCCP2-206ENST00000639594 ZNF428Q96B54 188 aa24.01■■□□□ 1.43
CROCCP2-206ENST00000639594 IFT57Q9NWB7 429 aa24.01■■□□□ 1.43
CROCCP2-206ENST00000639594 ZNF853P0CG23 659 aa24.01■■□□□ 1.43
CROCCP2-206ENST00000639594 TSPYL6Q8N831 410 aa24.01■■□□□ 1.43
CROCCP2-206ENST00000639594 DIP2AQ14689 1571 aa24■■□□□ 1.43
CROCCP2-206ENST00000639594 NUTM2FA1L443 756 aa23.99■■□□□ 1.43
CROCCP2-206ENST00000639594 MBIPQ9NS73 344 aa23.99■■□□□ 1.43
CROCCP2-206ENST00000639594 ACEP12821 1306 aa23.99■■□□□ 1.43
CROCCP2-206ENST00000639594 TTC21BQ7Z4L5 1316 aa23.99■■□□□ 1.43
CROCCP2-206ENST00000639594 AMOTL2Q9Y2J4 779 aa23.99■■□□□ 1.43
CROCCP2-206ENST00000639594 MRPL50Q8N5N7 158 aaKnown RBP23.98■■□□□ 1.43
CROCCP2-206ENST00000639594 BCL11AQ9H165 835 aa23.98■■□□□ 1.43
CROCCP2-206ENST00000639594 ANKLE2Q86XL3 938 aa23.97■■□□□ 1.43
CROCCP2-206ENST00000639594 SMC5Q8IY18 1101 aa23.97■■□□□ 1.43
CROCCP2-206ENST00000639594 FAM83GA6ND36 823 aa23.96■■□□□ 1.43
CROCCP2-206ENST00000639594 NFKBIBQ15653 356 aa23.96■■□□□ 1.43
CROCCP2-206ENST00000639594 NALCNQ8IZF0 1738 aa23.96■■□□□ 1.43
CROCCP2-206ENST00000639594 ELL2O00472 640 aaPredicted RBP23.96■■□□□ 1.43
CROCCP2-206ENST00000639594 PLEKHG3A1L390 1219 aa23.95■■□□□ 1.42
CROCCP2-206ENST00000639594 LMOD3Q0VAK6 560 aa23.95■■□□□ 1.42
CROCCP2-206ENST00000639594 XRN1Q8IZH2 1706 aaKnown RBP23.95■■□□□ 1.42
CROCCP2-206ENST00000639594 CFAP44Q96MT7 982 aa23.95■■□□□ 1.42
CROCCP2-206ENST00000639594 PEAK1Q9H792 1746 aa23.94■■□□□ 1.42
CROCCP2-206ENST00000639594 EIF4A2Q14240 407 aaKnown RBP23.94■■□□□ 1.42
CROCCP2-206ENST00000639594 OVOS2A0A0J9YW53 1432 aa23.94■■□□□ 1.42
CROCCP2-206ENST00000639594 OVOS2Q6IE36 1432 aa23.94■■□□□ 1.42
CROCCP2-206ENST00000639594 DCTN1Q14203 1278 aa23.93■■□□□ 1.42
CROCCP2-206ENST00000639594 RGPD8O14715 1765 aaPredicted RBP23.93■■□□□ 1.42
CROCCP2-206ENST00000639594 USP6P35125 1406 aa23.93■■□□□ 1.42
CROCCP2-206ENST00000639594 PTCH1Q13635 1447 aa23.93■■□□□ 1.42
CROCCP2-206ENST00000639594 AEBP1Q8IUX7 1158 aa23.93■■□□□ 1.42
CROCCP2-206ENST00000639594 TWISTNBQ3B726 338 aaPredicted RBP23.92■■□□□ 1.42
CROCCP2-206ENST00000639594 C8orf58Q8NAV2 365 aa23.92■■□□□ 1.42
CROCCP2-206ENST00000639594 ARHGAP45Q92619 1136 aa23.92■■□□□ 1.42
CROCCP2-206ENST00000639594 TBC1D32Q96NH3 1257 aa23.92■■□□□ 1.42
CROCCP2-206ENST00000639594 UPF2Q9HAU5 1272 aaKnown RBP23.92■■□□□ 1.42
CROCCP2-206ENST00000639594 ZBTB7BO15156 539 aaPredicted RBP23.91■■□□□ 1.42
CROCCP2-206ENST00000639594 SULT6B1Q6IMI4 303 aa23.91■■□□□ 1.42
CROCCP2-206ENST00000639594 PIK3R4Q99570 1358 aa23.9■■□□□ 1.42
CROCCP2-206ENST00000639594 RGPD1P0DJD0 1748 aa23.9■■□□□ 1.42
CROCCP2-206ENST00000639594 CHD2O14647 1828 aaKnown RBP23.89■■□□□ 1.42
CROCCP2-206ENST00000639594 KCNA6P17658 529 aa23.89■■□□□ 1.41
CROCCP2-206ENST00000639594 FMN2Q9NZ56 1722 aa23.87■■□□□ 1.41
CROCCP2-206ENST00000639594 NUCB1Q02818 461 aa23.87■■□□□ 1.41
CROCCP2-206ENST00000639594 BECN1Q14457 450 aa23.87■■□□□ 1.41
CROCCP2-206ENST00000639594 HSP90AB2PQ58FF8 381 aa23.86■■□□□ 1.41
CROCCP2-206ENST00000639594 ABCC4O15439 1325 aa23.86■■□□□ 1.41
CROCCP2-206ENST00000639594 SSH2Q76I76 1423 aa23.86■■□□□ 1.41
CROCCP2-206ENST00000639594 USP31Q70CQ4 1352 aa23.86■■□□□ 1.41
CROCCP2-206ENST00000639594 C1orf115Q9H7X2 142 aa23.85■■□□□ 1.41
CROCCP2-206ENST00000639594 NPHP4O75161 1426 aaPredicted RBP23.84■■□□□ 1.41
CROCCP2-206ENST00000639594 SOX12O15370 315 aa23.84■■□□□ 1.41
CROCCP2-206ENST00000639594 LNPKQ9C0E8 428 aa23.84■■□□□ 1.41
CROCCP2-206ENST00000639594 CHMP4BQ9H444 224 aaKnown RBP23.84■■□□□ 1.41
CROCCP2-206ENST00000639594 KDM4FA0A1W2PPD8 638 aa23.83■■□□□ 1.41
CROCCP2-206ENST00000639594 CHD1LQ86WJ1 897 aa23.82■■□□□ 1.4
CROCCP2-206ENST00000639594 FRAT2O75474 233 aaPredicted RBP23.81■■□□□ 1.4
CROCCP2-206ENST00000639594 MFAP1P55081 439 aaKnown RBP23.81■■□□□ 1.4
CROCCP2-206ENST00000639594 MCM10Q7L590 875 aa23.81■■□□□ 1.4
CROCCP2-206ENST00000639594 API5Q9BZZ5 524 aaKnown RBP23.8■■□□□ 1.4
CROCCP2-206ENST00000639594 TTC21AQ8NDW8 1320 aa23.8■■□□□ 1.4
CROCCP2-206ENST00000639594 KRT24Q2M2I5 525 aa23.79■■□□□ 1.4
CROCCP2-206ENST00000639594 SIRT2Q8IXJ6 389 aa23.79■■□□□ 1.4
CROCCP2-206ENST00000639594 RBM33Q96EV2 1170 aaKnown RBP23.79■■□□□ 1.4
CROCCP2-206ENST00000639594 C22orf23Q9BZE7 217 aa23.79■■□□□ 1.4
CROCCP2-206ENST00000639594 CHL1O00533 1208 aa23.78■■□□□ 1.4
CROCCP2-206ENST00000639594 TBC1D2Q9BYX2 928 aa23.78■■□□□ 1.4
CROCCP2-206ENST00000639594 MAP3K19Q56UN5 1328 aa23.78■■□□□ 1.4
CROCCP2-206ENST00000639594 ANKRD45Q5TZF3 282 aa23.78■■□□□ 1.4
CROCCP2-206ENST00000639594 GCC1Q96CN9 775 aa23.78■■□□□ 1.4
CROCCP2-206ENST00000639594 PIK3C2AO00443 1686 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms