RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 NCOA3Q9Y6Q9 1424 aa18.72■□□□□ 0.59
CHD1L-211ENST00000639534 NLRP6P59044 892 aa18.71■□□□□ 0.59
CHD1L-211ENST00000639534 GNAI1P63096 354 aa18.71■□□□□ 0.59
CHD1L-211ENST00000639534 MAP3K19Q56UN5 1328 aa18.71■□□□□ 0.59
CHD1L-211ENST00000639534 RTL1A6NKG5 1358 aa18.7■□□□□ 0.58
CHD1L-211ENST00000639534 CENPQQ7L2Z9 268 aaPredicted RBP18.7■□□□□ 0.58
CHD1L-211ENST00000639534 C14orf37Q86TY3 774 aa18.7■□□□□ 0.58
CHD1L-211ENST00000639534 IFT57Q9NWB7 429 aa18.7■□□□□ 0.58
CHD1L-211ENST00000639534 TCERG1O14776 1098 aaKnown RBP18.69■□□□□ 0.58
CHD1L-211ENST00000639534 AMPHP49418 695 aa18.69■□□□□ 0.58
CHD1L-211ENST00000639534 EXOSC9Q06265 439 aaKnown RBP18.69■□□□□ 0.58
CHD1L-211ENST00000639534 PHACTR3Q96KR7 559 aa18.69■□□□□ 0.58
CHD1L-211ENST00000639534 RBM19Q9Y4C8 960 aaKnown RBP18.69■□□□□ 0.58
CHD1L-211ENST00000639534 KIF1AQ12756 1690 aa18.69■□□□□ 0.58
CHD1L-211ENST00000639534 PROSER2Q86WR7 435 aaPredicted RBP18.68■□□□□ 0.58
CHD1L-211ENST00000639534 ABTB2Q8N961 1025 aa18.68■□□□□ 0.58
CHD1L-211ENST00000639534 MARF1Q9Y4F3 1742 aaKnown RBP18.67■□□□□ 0.58
CHD1L-211ENST00000639534 ALDH1L2Q3SY69 923 aa18.67■□□□□ 0.58
CHD1L-211ENST00000639534 SULT6B1Q6IMI4 303 aa18.67■□□□□ 0.58
CHD1L-211ENST00000639534 TSR2Q969E8 191 aaKnown RBP18.67■□□□□ 0.58
CHD1L-211ENST00000639534 HSP90AB2PQ58FF8 381 aa18.66■□□□□ 0.58
CHD1L-211ENST00000639534 ESCO1Q5FWF5 840 aa18.66■□□□□ 0.58
CHD1L-211ENST00000639534 ZKSCAN2Q63HK3 967 aa18.66■□□□□ 0.58
CHD1L-211ENST00000639534 DCCP43146 1447 aa18.66■□□□□ 0.58
CHD1L-211ENST00000639534 PAK3O75914 559 aaPredicted RBP18.65■□□□□ 0.58
CHD1L-211ENST00000639534 PSME1Q06323 249 aa18.65■□□□□ 0.58
CHD1L-211ENST00000639534 KCNH5Q8NCM2 988 aa18.65■□□□□ 0.58
CHD1L-211ENST00000639534 FRAT1Q92837 279 aaPredicted RBP18.65■□□□□ 0.58
CHD1L-211ENST00000639534 KDM2BQ8NHM5 1336 aa18.65■□□□□ 0.58
CHD1L-211ENST00000639534 KIF16BQ96L93 1317 aa18.65■□□□□ 0.58
CHD1L-211ENST00000639534 KDRP35968 1356 aa18.65■□□□□ 0.58
CHD1L-211ENST00000639534 IPO8O15397 1037 aaKnown RBP18.64■□□□□ 0.57
CHD1L-211ENST00000639534 ZNF853P0CG23 659 aa18.64■□□□□ 0.57
CHD1L-211ENST00000639534 HAP1P54257 671 aaPredicted RBP18.64■□□□□ 0.57
CHD1L-211ENST00000639534 C19orf44Q9H6X5 657 aa18.64■□□□□ 0.57
CHD1L-211ENST00000639534 SMC4Q9NTJ3 1288 aa18.64■□□□□ 0.57
CHD1L-211ENST00000639534 IGSF1Q8N6C5 1336 aa18.64■□□□□ 0.57
CHD1L-211ENST00000639534 BRPF1P55201 1214 aaPredicted RBP18.63■□□□□ 0.57
CHD1L-211ENST00000639534 CFAP44Q96MT7 982 aa18.63■□□□□ 0.57
CHD1L-211ENST00000639534 PHRF1Q9P1Y6 1649 aaKnown RBP18.62■□□□□ 0.57
CHD1L-211ENST00000639534 DLG5Q8TDM6 1919 aa18.61■□□□□ 0.57
CHD1L-211ENST00000639534 SOX12O15370 315 aa18.61■□□□□ 0.57
CHD1L-211ENST00000639534 HOXC9P31274 260 aa18.61■□□□□ 0.57
CHD1L-211ENST00000639534 CLUAP1Q96AJ1 413 aa18.61■□□□□ 0.57
CHD1L-211ENST00000639534 NFAT5O94916 1531 aa18.6■□□□□ 0.57
CHD1L-211ENST00000639534 C1orf167Q5SNV9 1468 aa18.6■□□□□ 0.57
CHD1L-211ENST00000639534 AEBP1Q8IUX7 1158 aa18.6■□□□□ 0.57
CHD1L-211ENST00000639534 DZIP1LQ8IYY4 767 aaKnown RBP18.6■□□□□ 0.57
CHD1L-211ENST00000639534 GAS2L2Q8NHY3 880 aa18.6■□□□□ 0.57
CHD1L-211ENST00000639534 MST1RQ04912 1400 aa18.59■□□□□ 0.57
CHD1L-211ENST00000639534 HTATSF1O43719 755 aaKnown RBP18.59■□□□□ 0.57
CHD1L-211ENST00000639534 FTSJ3Q8IY81 847 aaKnown RBP18.59■□□□□ 0.57
CHD1L-211ENST00000639534 PANK1Q8TE04 598 aa18.59■□□□□ 0.57
CHD1L-211ENST00000639534 SSH1Q8WYL5 1049 aa18.59■□□□□ 0.57
CHD1L-211ENST00000639534 COG6Q9Y2V7 657 aa18.59■□□□□ 0.57
CHD1L-211ENST00000639534 SLIT3O75094 1523 aa18.59■□□□□ 0.57
CHD1L-211ENST00000639534 LAS1LQ9Y4W2 734 aaKnown RBP18.58■□□□□ 0.56
CHD1L-211ENST00000639534 ATF3P18847 181 aa18.57■□□□□ 0.56
CHD1L-211ENST00000639534 MVPQ14764 893 aaKnown RBP18.57■□□□□ 0.56
CHD1L-211ENST00000639534 ATF7IPQ6VMQ6 1270 aa18.57■□□□□ 0.56
CHD1L-211ENST00000639534 IP6K1Q92551 441 aa18.57■□□□□ 0.56
CHD1L-211ENST00000639534 RBM33Q96EV2 1170 aaKnown RBP18.57■□□□□ 0.56
CHD1L-211ENST00000639534 EYA1Q99502 592 aa18.57■□□□□ 0.56
CHD1L-211ENST00000639534 BCL2L13Q9BXK5 485 aa18.57■□□□□ 0.56
CHD1L-211ENST00000639534 CHMP4BQ9H444 224 aaKnown RBP18.57■□□□□ 0.56
CHD1L-211ENST00000639534 ARHGAP45Q92619 1136 aa18.56■□□□□ 0.56
CHD1L-211ENST00000639534 MBIPQ9NS73 344 aa18.56■□□□□ 0.56
CHD1L-211ENST00000639534 TRPM3Q9HCF6 1732 aaPredicted RBP18.56■□□□□ 0.56
CHD1L-211ENST00000639534 LTN1O94822 1766 aa18.55■□□□□ 0.56
CHD1L-211ENST00000639534 VAMP4O75379 141 aa18.55■□□□□ 0.56
CHD1L-211ENST00000639534 NUTM2GQ5VZR2 741 aa18.55■□□□□ 0.56
CHD1L-211ENST00000639534 RTF1Q92541 710 aaKnown RBP18.55■□□□□ 0.56
CHD1L-211ENST00000639534 DDX19BQ9UMR2 479 aa18.55■□□□□ 0.56
CHD1L-211ENST00000639534 TMEM94Q12767 1356 aa18.55■□□□□ 0.56
CHD1L-211ENST00000639534 KIAA0232Q92628 1395 aa18.55■□□□□ 0.56
CHD1L-211ENST00000639534 ORAI2Q96SN7 254 aa18.54■□□□□ 0.56
CHD1L-211ENST00000639534 THUMPD2Q9BTF0 503 aaKnown RBP18.54■□□□□ 0.56
CHD1L-211ENST00000639534 USP19O94966 1318 aa18.53■□□□□ 0.56
CHD1L-211ENST00000639534 KRT28Q7Z3Y7 464 aa18.53■□□□□ 0.56
CHD1L-211ENST00000639534 CADPS2Q86UW7 1296 aa18.53■□□□□ 0.56
CHD1L-211ENST00000639534 CHL1O00533 1208 aa18.52■□□□□ 0.56
CHD1L-211ENST00000639534 FOXO3O43524 673 aa18.52■□□□□ 0.56
CHD1L-211ENST00000639534 RLBP1P12271 317 aa18.52■□□□□ 0.56
CHD1L-211ENST00000639534 TRIM27P14373 513 aa18.52■□□□□ 0.56
CHD1L-211ENST00000639534 TWISTNBQ3B726 338 aaPredicted RBP18.52■□□□□ 0.56
CHD1L-211ENST00000639534 NOB1Q9ULX3 412 aaKnown RBP18.52■□□□□ 0.56
CHD1L-211ENST00000639534 RWDD1Q9H446 243 aaPredicted RBP18.51■□□□□ 0.55
CHD1L-211ENST00000639534 MSH6P52701 1360 aa18.51■□□□□ 0.55
CHD1L-211ENST00000639534 CRB1P82279 1406 aa18.5■□□□□ 0.55
CHD1L-211ENST00000639534 FAM83GA6ND36 823 aa18.5■□□□□ 0.55
CHD1L-211ENST00000639534 MTHFSDQ2M296 383 aaKnown RBP18.5■□□□□ 0.55
CHD1L-211ENST00000639534 MRPL50Q8N5N7 158 aaKnown RBP18.5■□□□□ 0.55
CHD1L-211ENST00000639534 BABAM1Q9NWV8 329 aa18.5■□□□□ 0.55
CHD1L-211ENST00000639534 STRCP1A6NGW2 1772 aa18.5■□□□□ 0.55
CHD1L-211ENST00000639534 API5Q9BZZ5 524 aaKnown RBP18.49■□□□□ 0.55
CHD1L-211ENST00000639534 LRRC37A3O60309 1634 aa18.49■□□□□ 0.55
CHD1L-211ENST00000639534 SOS1Q07889 1333 aaPredicted RBP18.49■□□□□ 0.55
CHD1L-211ENST00000639534 ALS2Q96Q42 1657 aa18.48■□□□□ 0.55
CHD1L-211ENST00000639534 LMTK3Q96Q04 1460 aa18.48■□□□□ 0.55
CHD1L-211ENST00000639534 GCP02774 474 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms