RNA–Protein interactions for RNA: ENST00000639489.1

KCNMA1-262, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-262ENST00000639489 CCDC27Q2M243 656 aa17.96■□□□□ 0.47
KCNMA1-262ENST00000639489 NUTM2AQ8IVF1 878 aaPredicted RBP17.96■□□□□ 0.47
KCNMA1-262ENST00000639489 PHF8Q9UPP1 1060 aa17.96■□□□□ 0.47
KCNMA1-262ENST00000639489 NOL10Q9BSC4 688 aaKnown RBP17.96■□□□□ 0.47
KCNMA1-262ENST00000639489 FBXW7Q969H0 707 aa17.95■□□□□ 0.46
KCNMA1-262ENST00000639489 RABEP1Q15276 862 aa17.95■□□□□ 0.46
KCNMA1-262ENST00000639489 SYCP2Q9BX26 1530 aa17.95■□□□□ 0.46
KCNMA1-262ENST00000639489 FAM83GA6ND36 823 aa17.95■□□□□ 0.46
KCNMA1-262ENST00000639489 KDM4AO75164 1064 aa17.94■□□□□ 0.46
KCNMA1-262ENST00000639489 TRAK2O60296 914 aa17.94■□□□□ 0.46
KCNMA1-262ENST00000639489 PTCD1O75127 700 aaKnown RBP17.94■□□□□ 0.46
KCNMA1-262ENST00000639489 RPAP2Q8IXW5 612 aaPredicted RBP17.94■□□□□ 0.46
KCNMA1-262ENST00000639489 RNF214Q8ND24 703 aa17.94■□□□□ 0.46
KCNMA1-262ENST00000639489 ASXL2Q76L83 1435 aa17.94■□□□□ 0.46
KCNMA1-262ENST00000639489 TRIM27P14373 513 aa17.94■□□□□ 0.46
KCNMA1-262ENST00000639489 DHX16O60231 1041 aaKnown RBP17.94■□□□□ 0.46
KCNMA1-262ENST00000639489 KCNH5Q8NCM2 988 aa17.93■□□□□ 0.46
KCNMA1-262ENST00000639489 CCDC85AQ96PX6 553 aaPredicted RBP17.93■□□□□ 0.46
KCNMA1-262ENST00000639489 TESK2Q96S53 571 aa17.93■□□□□ 0.46
KCNMA1-262ENST00000639489 NKTRP30414 1462 aaKnown RBP17.93■□□□□ 0.46
KCNMA1-262ENST00000639489 KIF6Q6ZMV9 814 aa17.93■□□□□ 0.46
KCNMA1-262ENST00000639489 IFT57Q9NWB7 429 aa17.93■□□□□ 0.46
KCNMA1-262ENST00000639489 ERC1Q8IUD2 1116 aa17.92■□□□□ 0.46
KCNMA1-262ENST00000639489 SMARCA5O60264 1052 aaPredicted RBP17.92■□□□□ 0.46
KCNMA1-262ENST00000639489 MPRIPQ6WCQ1 1025 aa17.92■□□□□ 0.46
KCNMA1-262ENST00000639489 AMOTL1Q8IY63 956 aa17.91■□□□□ 0.46
KCNMA1-262ENST00000639489 ERICH2A1L162 156 aa17.91■□□□□ 0.46
KCNMA1-262ENST00000639489 PSMA5P28066 241 aa17.91■□□□□ 0.46
KCNMA1-262ENST00000639489 TPD52L1Q16890 204 aaPredicted RBP17.91■□□□□ 0.46
KCNMA1-262ENST00000639489 CAVIN1Q6NZI2 390 aaKnown RBP17.91■□□□□ 0.46
KCNMA1-262ENST00000639489 AACSQ86V21 672 aa17.91■□□□□ 0.46
KCNMA1-262ENST00000639489 CNNM1Q9NRU3 951 aa17.91■□□□□ 0.46
KCNMA1-262ENST00000639489 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.9■□□□□ 0.46
KCNMA1-262ENST00000639489 PRPF40AO75400 957 aaKnown RBP17.9■□□□□ 0.46
KCNMA1-262ENST00000639489 MTMR7Q9Y216 660 aa17.9■□□□□ 0.46
KCNMA1-262ENST00000639489 ACEP12821 1306 aa17.9■□□□□ 0.46
KCNMA1-262ENST00000639489 TAF7Q15545 349 aaPredicted RBP17.89■□□□□ 0.45
KCNMA1-262ENST00000639489 HSP90AB2PQ58FF8 381 aa17.89■□□□□ 0.45
KCNMA1-262ENST00000639489 NUTM1Q86Y26 1132 aa17.89■□□□□ 0.45
KCNMA1-262ENST00000639489 PRAG1Q86YV5 1406 aa17.89■□□□□ 0.45
KCNMA1-262ENST00000639489 ABCC11Q96J66 1382 aa17.89■□□□□ 0.45
KCNMA1-262ENST00000639489 LRPPRCP42704 1394 aaKnown RBP17.89■□□□□ 0.45
KCNMA1-262ENST00000639489 FIBPO43427 364 aa17.89■□□□□ 0.45
KCNMA1-262ENST00000639489 ALDH1L2Q3SY69 923 aa17.88■□□□□ 0.45
KCNMA1-262ENST00000639489 CWC27Q6UX04 472 aaKnown RBP17.88■□□□□ 0.45
KCNMA1-262ENST00000639489 TBC1D2BQ9UPU7 963 aa17.88■□□□□ 0.45
KCNMA1-262ENST00000639489 ATP2B1P20020 1258 aa17.87■□□□□ 0.45
KCNMA1-262ENST00000639489 CCDC73Q6ZRK6 1079 aa17.87■□□□□ 0.45
KCNMA1-262ENST00000639489 RALGAPBQ86X10 1494 aa17.87■□□□□ 0.45
KCNMA1-262ENST00000639489 A2MP01023 1474 aa17.86■□□□□ 0.45
KCNMA1-262ENST00000639489 MCM2P49736 904 aa17.86■□□□□ 0.45
KCNMA1-262ENST00000639489 STK3Q13188 491 aa17.86■□□□□ 0.45
KCNMA1-262ENST00000639489 K7ELQ4 463 aaPredicted RBP17.86■□□□□ 0.45
KCNMA1-262ENST00000639489 CCDC57Q2TAC2 916 aa17.86■□□□□ 0.45
KCNMA1-262ENST00000639489 FKBP4Q02790 459 aaKnown RBP eCLIP17.86■□□□□ 0.45
KCNMA1-262ENST00000639489 RRP12Q5JTH9 1297 aaKnown RBP17.86■□□□□ 0.45
KCNMA1-262ENST00000639489 ZRANB1Q9UGI0 708 aa17.86■□□□□ 0.45
KCNMA1-262ENST00000639489 NCBP3Q53F19 620 aaKnown RBP17.85■□□□□ 0.45
KCNMA1-262ENST00000639489 HIP1O00291 1037 aa17.85■□□□□ 0.45
KCNMA1-262ENST00000639489 SAFBQ15424 915 aaKnown RBP eCLIP17.85■□□□□ 0.45
KCNMA1-262ENST00000639489 CCDC158Q5M9N0 1113 aa17.85■□□□□ 0.45
KCNMA1-262ENST00000639489 SASS6Q6UVJ0 657 aa17.85■□□□□ 0.45
KCNMA1-262ENST00000639489 KIAA0556O60303 1618 aa17.85■□□□□ 0.45
KCNMA1-262ENST00000639489 SDF4Q9BRK5 362 aa17.84■□□□□ 0.45
KCNMA1-262ENST00000639489 MBIPQ9NS73 344 aa17.84■□□□□ 0.45
KCNMA1-262ENST00000639489 IGHDP01880 384 aa17.84■□□□□ 0.45
KCNMA1-262ENST00000639489 UPF3BQ9BZI7 483 aaKnown RBP17.84■□□□□ 0.45
KCNMA1-262ENST00000639489 PIP4K2BP78356 416 aa17.84■□□□□ 0.45
KCNMA1-262ENST00000639489 CEBPZQ03701 1054 aaKnown RBP17.84■□□□□ 0.45
KCNMA1-262ENST00000639489 SAMD1Q6SPF0 538 aaPredicted RBP17.84■□□□□ 0.45
KCNMA1-262ENST00000639489 STK11IPQ8N1F8 1099 aa17.84■□□□□ 0.45
KCNMA1-262ENST00000639489 CARD14Q9BXL6 1004 aa17.84■□□□□ 0.45
KCNMA1-262ENST00000639489 TRIM34Q9BYJ4 488 aa17.84■□□□□ 0.45
KCNMA1-262ENST00000639489 CYP46A1Q9Y6A2 500 aa17.84■□□□□ 0.45
KCNMA1-262ENST00000639489 CEP126Q9P2H0 1117 aa17.84■□□□□ 0.45
KCNMA1-262ENST00000639489 WDR62O43379 1518 aa17.83■□□□□ 0.45
KCNMA1-262ENST00000639489 NASPP49321 788 aaPredicted RBP17.83■□□□□ 0.45
KCNMA1-262ENST00000639489 PPP6R1Q9UPN7 881 aa17.83■□□□□ 0.45
KCNMA1-262ENST00000639489 DUOX2Q9NRD8 1548 aa17.83■□□□□ 0.45
KCNMA1-262ENST00000639489 ADAMTS12P58397 1594 aa17.83■□□□□ 0.45
KCNMA1-262ENST00000639489 TCOF1Q13428 1488 aaKnown RBP17.83■□□□□ 0.44
KCNMA1-262ENST00000639489 TTC39AQ5SRH9 613 aa17.83■□□□□ 0.44
KCNMA1-262ENST00000639489 ANXA1P04083 346 aa17.83■□□□□ 0.44
KCNMA1-262ENST00000639489 ZNF592Q92610 1267 aa17.82■□□□□ 0.44
KCNMA1-262ENST00000639489 MRE11P49959 708 aa17.81■□□□□ 0.44
KCNMA1-262ENST00000639489 FLIIQ13045 1269 aa17.81■□□□□ 0.44
KCNMA1-262ENST00000639489 AEBP2Q6ZN18 517 aaPredicted RBP17.81■□□□□ 0.44
KCNMA1-262ENST00000639489 MPHOSPH8Q99549 860 aa17.81■□□□□ 0.44
KCNMA1-262ENST00000639489 LRRFIP2Q9Y608 721 aaKnown RBP17.81■□□□□ 0.44
KCNMA1-262ENST00000639489 CTTNBP2Q8WZ74 1663 aa17.81■□□□□ 0.44
KCNMA1-262ENST00000639489 TPM3P06753 285 aa17.81■□□□□ 0.44
KCNMA1-262ENST00000639489 PDCP20941 246 aa17.81■□□□□ 0.44
KCNMA1-262ENST00000639489 AEBP1Q8IUX7 1158 aa17.81■□□□□ 0.44
KCNMA1-262ENST00000639489 NSD2O96028 1365 aa17.81■□□□□ 0.44
KCNMA1-262ENST00000639489 PDE4CQ08493 712 aa17.81■□□□□ 0.44
KCNMA1-262ENST00000639489 MX1P20591 662 aa17.81■□□□□ 0.44
KCNMA1-262ENST00000639489 BRPF3Q9ULD4 1205 aa17.81■□□□□ 0.44
KCNMA1-262ENST00000639489 PER1O15534 1290 aaPredicted RBP17.8■□□□□ 0.44
KCNMA1-262ENST00000639489 KIF1BPQ96EK5 621 aa17.8■□□□□ 0.44
KCNMA1-262ENST00000639489 PARD3Q8TEW0 1356 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms