RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 ABCB7O75027 752 aa8.03□□□□□ -1.12
PDE4D-229ENST00000638939 NUDT16Q96DE0 195 aaKnown RBP8.03□□□□□ -1.12
PDE4D-229ENST00000638939 NHSQ6T4R5 1651 aa8.02□□□□□ -1.13
PDE4D-229ENST00000638939 FAM208AQ9UK61 1670 aaKnown RBP8.02□□□□□ -1.13
PDE4D-229ENST00000638939 PAK3O75914 559 aaPredicted RBP8.02□□□□□ -1.13
PDE4D-229ENST00000638939 ZNF692Q9BU19 519 aaPredicted RBP8.02□□□□□ -1.13
PDE4D-229ENST00000638939 TAOK2Q9UL54 1235 aa8.02□□□□□ -1.13
PDE4D-229ENST00000638939 KDM2AQ9Y2K7 1162 aa8.02□□□□□ -1.13
PDE4D-229ENST00000638939 PPIP5K1Q6PFW1 1433 aa8.02□□□□□ -1.13
PDE4D-229ENST00000638939 ACEP12821 1306 aa8.02□□□□□ -1.13
PDE4D-229ENST00000638939 BARGINQ6ZT62 677 aa8.01□□□□□ -1.13
PDE4D-229ENST00000638939 USP6P35125 1406 aa8.01□□□□□ -1.13
PDE4D-229ENST00000638939 UTRNP46939 3433 aa8.01□□□□□ -1.13
PDE4D-229ENST00000638939 QSER1Q2KHR3 1735 aa8□□□□□ -1.13
PDE4D-229ENST00000638939 NFAT5O94916 1531 aa8□□□□□ -1.13
PDE4D-229ENST00000638939 PLEKHG3A1L390 1219 aa8□□□□□ -1.13
PDE4D-229ENST00000638939 SPDYE2BA6NHP3 402 aa8□□□□□ -1.13
PDE4D-229ENST00000638939 SPDYE6P0CI01 402 aa8□□□□□ -1.13
PDE4D-229ENST00000638939 EN1Q05925 392 aaPredicted RBP8□□□□□ -1.13
PDE4D-229ENST00000638939 SPDYE2Q495Y8 402 aa8□□□□□ -1.13
PDE4D-229ENST00000638939 FAM196AQ6ZSG2 479 aa8□□□□□ -1.13
PDE4D-229ENST00000638939 PAXIP1Q6ZW49 1069 aaPredicted RBP8□□□□□ -1.13
PDE4D-229ENST00000638939 SPRYD3Q8NCJ5 442 aa8□□□□□ -1.13
PDE4D-229ENST00000638939 CDK19Q9BWU1 502 aa8□□□□□ -1.13
PDE4D-229ENST00000638939 CCDC61Q9Y6R9 512 aa8□□□□□ -1.13
PDE4D-229ENST00000638939 OVOS2A0A0G2JMS6 1433 aa8□□□□□ -1.13
PDE4D-229ENST00000638939 OVOS2A0A0J9YW53 1432 aa8□□□□□ -1.13
PDE4D-229ENST00000638939 CRB1P82279 1406 aa8□□□□□ -1.13
PDE4D-229ENST00000638939 OVOS2Q6IE36 1432 aa8□□□□□ -1.13
PDE4D-229ENST00000638939 CHD4Q14839 1912 aa7.99□□□□□ -1.13
PDE4D-229ENST00000638939 PSDA5PKW4 1024 aaPredicted RBP7.99□□□□□ -1.13
PDE4D-229ENST00000638939 CHRNA2Q15822 529 aa7.99□□□□□ -1.13
PDE4D-229ENST00000638939 CFAP44Q96MT7 982 aa7.99□□□□□ -1.13
PDE4D-229ENST00000638939 THRAP3Q9Y2W1 955 aaKnown RBP7.99□□□□□ -1.13
PDE4D-229ENST00000638939 MYOM1P52179 1685 aa7.98□□□□□ -1.13
PDE4D-229ENST00000638939 CPSF1Q10570 1443 aaKnown RBP7.98□□□□□ -1.13
PDE4D-229ENST00000638939 NBPF8Q3BBV2 869 aa7.98□□□□□ -1.13
PDE4D-229ENST00000638939 FAM182BQ5T319 152 aa7.98□□□□□ -1.13
PDE4D-229ENST00000638939 CAMKK2Q96RR4 588 aa7.98□□□□□ -1.13
PDE4D-229ENST00000638939 STRN4Q9NRL3 753 aa7.98□□□□□ -1.13
PDE4D-229ENST00000638939 PAPPAQ13219 1627 aa7.98□□□□□ -1.13
PDE4D-229ENST00000638939 BTAF1O14981 1849 aa7.98□□□□□ -1.13
PDE4D-229ENST00000638939 CENPJQ9HC77 1338 aaPredicted RBP7.98□□□□□ -1.13
PDE4D-229ENST00000638939 AATKQ6ZMQ8 1374 aa7.97□□□□□ -1.13
PDE4D-229ENST00000638939 BCL9O00512 1426 aa7.97□□□□□ -1.13
PDE4D-229ENST00000638939 C11orf95C9JLR9 678 aaPredicted RBP7.97□□□□□ -1.13
PDE4D-229ENST00000638939 TRIM37O94972 964 aa7.97□□□□□ -1.13
PDE4D-229ENST00000638939 ZC3H6P61129 1189 aaKnown RBP7.97□□□□□ -1.13
PDE4D-229ENST00000638939 R3HDM1Q15032 1099 aaKnown RBP7.97□□□□□ -1.13
PDE4D-229ENST00000638939 EZH2Q15910 746 aaKnown RBP7.97□□□□□ -1.13
PDE4D-229ENST00000638939 MIER1Q8N108 512 aa7.97□□□□□ -1.13
PDE4D-229ENST00000638939 TCP11L2Q8N4U5 519 aa7.97□□□□□ -1.13
PDE4D-229ENST00000638939 ABTB2Q8N961 1025 aa7.97□□□□□ -1.13
PDE4D-229ENST00000638939 COL24A1Q17RW2 1714 aa7.97□□□□□ -1.13
PDE4D-229ENST00000638939 TUBGCP6Q96RT7 1819 aa7.96□□□□□ -1.13
PDE4D-229ENST00000638939 GOLGB1Q14789 3259 aaKnown RBP7.96□□□□□ -1.13
PDE4D-229ENST00000638939 SHANK3Q9BYB0 1731 aa7.96□□□□□ -1.14
PDE4D-229ENST00000638939 NUTM2GQ5VZR2 741 aa7.96□□□□□ -1.14
PDE4D-229ENST00000638939 LARP1Q6PKG0 1096 aaKnown RBP7.96□□□□□ -1.14
PDE4D-229ENST00000638939 NLRP13Q86W25 1043 aa7.96□□□□□ -1.14
PDE4D-229ENST00000638939 KAT6BQ8WYB5 2073 aa7.96□□□□□ -1.14
PDE4D-229ENST00000638939 TNS2Q63HR2 1409 aa7.95□□□□□ -1.14
PDE4D-229ENST00000638939 GCP02774 474 aa7.95□□□□□ -1.14
PDE4D-229ENST00000638939 EVA1CP58658 441 aa7.95□□□□□ -1.14
PDE4D-229ENST00000638939 SRPK2P78362 688 aaKnown RBP7.95□□□□□ -1.14
PDE4D-229ENST00000638939 PDE3BQ13370 1112 aa7.95□□□□□ -1.14
PDE4D-229ENST00000638939 SBNO2Q9Y2G9 1366 aa7.95□□□□□ -1.14
PDE4D-229ENST00000638939 NINLQ9Y2I6 1382 aa7.95□□□□□ -1.14
PDE4D-229ENST00000638939 APBA3O96018 575 aa7.94□□□□□ -1.14
PDE4D-229ENST00000638939 DSG3P32926 999 aa7.94□□□□□ -1.14
PDE4D-229ENST00000638939 NBPF1Q3BBV0 1214 aa7.94□□□□□ -1.14
PDE4D-229ENST00000638939 USP35Q9P2H5 1018 aa7.94□□□□□ -1.14
PDE4D-229ENST00000638939 LY75O60449 1722 aa7.94□□□□□ -1.14
PDE4D-229ENST00000638939 DOT1LQ8TEK3 1739 aa7.94□□□□□ -1.14
PDE4D-229ENST00000638939 RGPD2P0DJD1 1756 aa7.93□□□□□ -1.14
PDE4D-229ENST00000638939 EVC2Q86UK5 1308 aa7.93□□□□□ -1.14
PDE4D-229ENST00000638939 WDR17Q8IZU2 1322 aa7.93□□□□□ -1.14
PDE4D-229ENST00000638939 KIF20BQ96Q89 1820 aa7.92□□□□□ -1.14
PDE4D-229ENST00000638939 CABP2Q9NPB3 220 aa7.92□□□□□ -1.14
PDE4D-229ENST00000638939 TTC21AQ8NDW8 1320 aa7.92□□□□□ -1.14
PDE4D-229ENST00000638939 NBPF14Q5TI25 921 aa7.91□□□□□ -1.14
PDE4D-229ENST00000638939 CDCA7Q9BWT1 371 aaPredicted RBP7.91□□□□□ -1.14
PDE4D-229ENST00000638939 ROCK2O75116 1388 aaKnown RBP7.91□□□□□ -1.14
PDE4D-229ENST00000638939 CD163L1Q9NR16 1453 aa7.91□□□□□ -1.14
PDE4D-229ENST00000638939 CCDC7Q96M83 1385 aa7.9□□□□□ -1.14
PDE4D-229ENST00000638939 PLSCR1O15162 318 aa7.9□□□□□ -1.14
PDE4D-229ENST00000638939 NLRP6P59044 892 aa7.9□□□□□ -1.14
PDE4D-229ENST00000638939 NBR1Q14596 966 aa7.9□□□□□ -1.14
PDE4D-229ENST00000638939 DDB1Q16531 1140 aa7.9□□□□□ -1.14
PDE4D-229ENST00000638939 CABP1Q9NZU7 370 aa7.9□□□□□ -1.14
PDE4D-229ENST00000638939 CIZ1Q9ULV3 898 aaPredicted RBP7.9□□□□□ -1.14
PDE4D-229ENST00000638939 SSUH2Q9Y2M2 353 aa7.9□□□□□ -1.14
PDE4D-229ENST00000638939 TAF1LQ8IZX4 1826 aa7.89□□□□□ -1.15
PDE4D-229ENST00000638939 USP31Q70CQ4 1352 aa7.89□□□□□ -1.15
PDE4D-229ENST00000638939 KTN1Q86UP2 1357 aaKnown RBP7.89□□□□□ -1.15
PDE4D-229ENST00000638939 TTC21BQ7Z4L5 1316 aa7.89□□□□□ -1.15
PDE4D-229ENST00000638939 TOM1L2Q6ZVM7 507 aa7.89□□□□□ -1.15
PDE4D-229ENST00000638939 ARHGEF25Q86VW2 580 aa7.89□□□□□ -1.15
PDE4D-229ENST00000638939 KCNH5Q8NCM2 988 aa7.89□□□□□ -1.15
PDE4D-229ENST00000638939 CARD10Q9BWT7 1032 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms