RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 SWT1Q5T5J6 900 aaKnown RBP3.76□□□□□ -1.81
HMHB1-202ENST00000638299 NT5DC4Q86YG4 428 aa3.76□□□□□ -1.81
HMHB1-202ENST00000638299 RNF135Q8IUD6 432 aa3.76□□□□□ -1.81
HMHB1-202ENST00000638299 FAM9AQ8IZU1 332 aaPredicted RBP3.76□□□□□ -1.81
HMHB1-202ENST00000638299 GPATCH3Q96I76 525 aa3.76□□□□□ -1.81
HMHB1-202ENST00000638299 PURBQ96QR8 312 aaKnown RBP3.76□□□□□ -1.81
HMHB1-202ENST00000638299 MKNK1Q9BUB5 465 aa3.76□□□□□ -1.81
HMHB1-202ENST00000638299 EGFL7Q9UHF1 273 aa3.76□□□□□ -1.81
HMHB1-202ENST00000638299 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMHB1-202ENST00000638299 IQSEC3Q9UPP2 1182 aaPredicted RBP3.76□□□□□ -1.81
HMHB1-202ENST00000638299 C21orf2O43822 256 aa3.75□□□□□ -1.81
HMHB1-202ENST00000638299 LZTS3O60299 673 aaPredicted RBP3.75□□□□□ -1.81
HMHB1-202ENST00000638299 BRD2P25440 801 aaKnown RBP3.75□□□□□ -1.81
HMHB1-202ENST00000638299 GTF2F1P35269 517 aaKnown RBP eCLIP3.75□□□□□ -1.81
HMHB1-202ENST00000638299 TNNI2P48788 182 aa3.75□□□□□ -1.81
HMHB1-202ENST00000638299 ARSIQ5FYB1 569 aa3.75□□□□□ -1.81
HMHB1-202ENST00000638299 TRAF7Q6Q0C0 670 aa3.75□□□□□ -1.81
HMHB1-202ENST00000638299 TMEM87AQ8NBN3 555 aa3.75□□□□□ -1.81
HMHB1-202ENST00000638299 VTI1AQ96AJ9 217 aa3.75□□□□□ -1.81
HMHB1-202ENST00000638299 OCSTAMPQ9BR26 566 aa3.75□□□□□ -1.81
HMHB1-202ENST00000638299 ACBD3Q9H3P7 528 aa3.75□□□□□ -1.81
HMHB1-202ENST00000638299 DNAAF2Q9NVR5 837 aaKnown RBP3.75□□□□□ -1.81
HMHB1-202ENST00000638299 PRKAG2Q9UGJ0 569 aa3.75□□□□□ -1.81
HMHB1-202ENST00000638299 FKBPLQ9UIM3 349 aa3.75□□□□□ -1.81
HMHB1-202ENST00000638299 TLDC2A0PJX2 215 aa3.74□□□□□ -1.81
HMHB1-202ENST00000638299 RAB11FIP3O75154 756 aa3.74□□□□□ -1.81
HMHB1-202ENST00000638299 FMNL1O95466 1100 aaPredicted RBP3.74□□□□□ -1.81
HMHB1-202ENST00000638299 SEC24BO95487 1268 aa3.74□□□□□ -1.81
HMHB1-202ENST00000638299 LYPD8Q6UX82 237 aa3.74□□□□□ -1.81
HMHB1-202ENST00000638299 C3orf67Q6ZVT6 689 aa3.74□□□□□ -1.81
HMHB1-202ENST00000638299 NOL8Q76FK4 1167 aaKnown RBP3.74□□□□□ -1.81
HMHB1-202ENST00000638299 PACS2Q86VP3 889 aa3.74□□□□□ -1.81
HMHB1-202ENST00000638299 ZSCAN29Q8IWY8 852 aaPredicted RBP3.74□□□□□ -1.81
HMHB1-202ENST00000638299 RGL4Q8IZJ4 473 aa3.74□□□□□ -1.81
HMHB1-202ENST00000638299 PMFBP1Q8TBY8 1022 aa3.74□□□□□ -1.81
HMHB1-202ENST00000638299 SETDB2Q96T68 719 aa3.74□□□□□ -1.81
HMHB1-202ENST00000638299 CAPN10Q9HC96 672 aa3.74□□□□□ -1.81
HMHB1-202ENST00000638299 MAP10Q9P2G4 905 aa3.74□□□□□ -1.81
HMHB1-202ENST00000638299 FKBP4Q02790 459 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMHB1-202ENST00000638299 EVX2Q03828 476 aa3.73□□□□□ -1.81
HMHB1-202ENST00000638299 NAA30Q147X3 362 aaPredicted RBP3.73□□□□□ -1.81
HMHB1-202ENST00000638299 COL19A1Q14993 1142 aa3.73□□□□□ -1.81
HMHB1-202ENST00000638299 EML3Q32P44 896 aa3.73□□□□□ -1.81
HMHB1-202ENST00000638299 PUS10Q3MIT2 529 aaKnown RBP3.73□□□□□ -1.81
HMHB1-202ENST00000638299 EGFLAMQ63HQ2 1017 aa3.73□□□□□ -1.81
HMHB1-202ENST00000638299 SDE2Q6IQ49 451 aa3.73□□□□□ -1.81
HMHB1-202ENST00000638299 TMC7Q7Z402 723 aa3.73□□□□□ -1.81
HMHB1-202ENST00000638299 NOP9Q86U38 636 aaKnown RBP3.73□□□□□ -1.81
HMHB1-202ENST00000638299 NLGN1Q8N2Q7 840 aa3.73□□□□□ -1.81
HMHB1-202ENST00000638299 LARGE2Q8N3Y3 721 aa3.73□□□□□ -1.81
HMHB1-202ENST00000638299 MICAL1Q8TDZ2 1067 aa3.73□□□□□ -1.81
HMHB1-202ENST00000638299 SPACA7Q96KW9 195 aa3.73□□□□□ -1.81
HMHB1-202ENST00000638299 CCDC85AQ96PX6 553 aaPredicted RBP3.73□□□□□ -1.81
HMHB1-202ENST00000638299 CUEDC1Q9NWM3 386 aaPredicted RBP3.73□□□□□ -1.81
HMHB1-202ENST00000638299 CHIC2Q9UKJ5 165 aa3.73□□□□□ -1.81
HMHB1-202ENST00000638299 WWC3Q9ULE0 1092 aa3.73□□□□□ -1.81
HMHB1-202ENST00000638299 LHX6Q9UPM6 363 aa3.73□□□□□ -1.81
HMHB1-202ENST00000638299 PCDHB9Q9Y5E1 797 aa3.73□□□□□ -1.81
HMHB1-202ENST00000638299 F12P00748 615 aaPredicted RBP3.72□□□□□ -1.81
HMHB1-202ENST00000638299 ATP2B1P20020 1258 aa3.72□□□□□ -1.81
HMHB1-202ENST00000638299 SEC13P55735 322 aa3.72□□□□□ -1.81
HMHB1-202ENST00000638299 FANCCQ00597 558 aa3.72□□□□□ -1.81
HMHB1-202ENST00000638299 FKBP5Q13451 457 aaPredicted RBP3.72□□□□□ -1.81
HMHB1-202ENST00000638299 RETREG3Q86VR2 466 aa3.72□□□□□ -1.81
HMHB1-202ENST00000638299 SIX5Q8N196 739 aa3.72□□□□□ -1.81
HMHB1-202ENST00000638299 DUSP9Q99956 384 aaKnown RBP3.72□□□□□ -1.81
HMHB1-202ENST00000638299 BCL2L12Q9HB09 334 aa3.72□□□□□ -1.81
HMHB1-202ENST00000638299 KIAA1468Q9P260 1216 aa3.72□□□□□ -1.81
HMHB1-202ENST00000638299 PARP2Q9UGN5 583 aa3.72□□□□□ -1.81
HMHB1-202ENST00000638299 NOD1Q9Y239 953 aa3.72□□□□□ -1.81
HMHB1-202ENST00000638299 TMA7Q9Y2S6 64 aaKnown RBP3.72□□□□□ -1.81
HMHB1-202ENST00000638299 TBX22Q9Y458 520 aa3.72□□□□□ -1.81
HMHB1-202ENST00000638299 CFHP08603 1231 aa3.71□□□□□ -1.82
HMHB1-202ENST00000638299 DNAJA1P31689 397 aaKnown RBP3.71□□□□□ -1.82
HMHB1-202ENST00000638299 ATP6V1AP38606 617 aa3.71□□□□□ -1.82
HMHB1-202ENST00000638299 GTF2IP78347 998 aa3.71□□□□□ -1.82
HMHB1-202ENST00000638299 TCEAL1Q15170 157 aa3.71□□□□□ -1.82
HMHB1-202ENST00000638299 OXLD1Q5BKU9 147 aa3.71□□□□□ -1.82
HMHB1-202ENST00000638299 CCDC102BQ68D86 513 aa3.71□□□□□ -1.82
HMHB1-202ENST00000638299 PPP1R18Q6NYC8 613 aa3.71□□□□□ -1.82
HMHB1-202ENST00000638299 TMED8Q6PL24 325 aaPredicted RBP3.71□□□□□ -1.82
HMHB1-202ENST00000638299 RNF19BQ6ZMZ0 732 aa3.71□□□□□ -1.82
HMHB1-202ENST00000638299 SLC43A3Q8NBI5 491 aa3.71□□□□□ -1.82
HMHB1-202ENST00000638299 ZNF592Q92610 1267 aa3.71□□□□□ -1.82
HMHB1-202ENST00000638299 RNF34Q969K3 372 aa3.71□□□□□ -1.82
HMHB1-202ENST00000638299 HINFPQ9BQA5 517 aa3.71□□□□□ -1.82
HMHB1-202ENST00000638299 TGIF2Q9GZN2 237 aa3.71□□□□□ -1.82
HMHB1-202ENST00000638299 CCSER2Q9H7U1 834 aa3.71□□□□□ -1.82
HMHB1-202ENST00000638299 SLC52A1Q9NWF4 448 aa3.71□□□□□ -1.82
HMHB1-202ENST00000638299 SLC27A5Q9Y2P5 690 aa3.71□□□□□ -1.82
HMHB1-202ENST00000638299 TREHO43280 583 aa3.7□□□□□ -1.82
HMHB1-202ENST00000638299 LDHBP07195 334 aaKnown RBP3.7□□□□□ -1.82
HMHB1-202ENST00000638299 PTPREP23469 700 aa3.7□□□□□ -1.82
HMHB1-202ENST00000638299 MAPK8P45983 427 aa3.7□□□□□ -1.82
HMHB1-202ENST00000638299 ATP1A2P50993 1020 aa3.7□□□□□ -1.82
HMHB1-202ENST00000638299 XPCQ01831 940 aaPredicted RBP3.7□□□□□ -1.82
HMHB1-202ENST00000638299 FMR1Q06787 632 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMHB1-202ENST00000638299 SF3B2Q13435 895 aaKnown RBP3.7□□□□□ -1.82
HMHB1-202ENST00000638299 GRIPAP1Q4V328 841 aa3.7□□□□□ -1.82
HMHB1-202ENST00000638299 MORN1Q5T089 497 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms