RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 CPSF1Q10570 1443 aaKnown RBP26.05■■□□□ 1.76
CTSD-209ENST00000637158 SIN3AQ96ST3 1273 aa26.05■■□□□ 1.76
CTSD-209ENST00000637158 SPON1Q9HCB6 807 aa26.05■■□□□ 1.76
CTSD-209ENST00000637158 PIK3C2AO00443 1686 aa26.05■■□□□ 1.76
CTSD-209ENST00000637158 CARD10Q9BWT7 1032 aa26.04■■□□□ 1.76
CTSD-209ENST00000637158 CSB-PGBD3P0DP91 1061 aa26.03■■□□□ 1.76
CTSD-209ENST00000637158 NEUROD1Q13562 356 aa26.03■■□□□ 1.76
CTSD-209ENST00000637158 PPP1R1BQ9UD71 204 aaPredicted RBP26.03■■□□□ 1.76
CTSD-209ENST00000637158 BCL9O00512 1426 aa26.03■■□□□ 1.76
CTSD-209ENST00000637158 COL18A1P39060 1754 aa26.02■■□□□ 1.76
CTSD-209ENST00000637158 KCNQ2O43526 872 aa26.02■■□□□ 1.76
CTSD-209ENST00000637158 PEAK1Q9H792 1746 aa26.02■■□□□ 1.76
CTSD-209ENST00000637158 LRRC37A3O60309 1634 aa26.01■■□□□ 1.75
CTSD-209ENST00000637158 KTN1Q86UP2 1357 aaKnown RBP26.01■■□□□ 1.75
CTSD-209ENST00000637158 RGPD3A6NKT7 1758 aaPredicted RBP26■■□□□ 1.75
CTSD-209ENST00000637158 RGPD4Q7Z3J3 1758 aa26■■□□□ 1.75
CTSD-209ENST00000637158 DCAF8L1A6NGE4 600 aa25.99■■□□□ 1.75
CTSD-209ENST00000637158 EXOC5O00471 708 aa25.99■■□□□ 1.75
CTSD-209ENST00000637158 SOX12O15370 315 aa25.99■■□□□ 1.75
CTSD-209ENST00000637158 MARCH10Q8NA82 808 aaPredicted RBP25.99■■□□□ 1.75
CTSD-209ENST00000637158 CCDC7Q96M83 1385 aa25.97■■□□□ 1.75
CTSD-209ENST00000637158 AKAP12Q02952 1782 aa25.97■■□□□ 1.75
CTSD-209ENST00000637158 SBNO2Q9Y2G9 1366 aa25.96■■□□□ 1.75
CTSD-209ENST00000637158 SBF2Q86WG5 1849 aa25.95■■□□□ 1.75
CTSD-209ENST00000637158 ABCC6O95255 1503 aa25.95■■□□□ 1.74
CTSD-209ENST00000637158 NINLQ9Y2I6 1382 aa25.94■■□□□ 1.74
CTSD-209ENST00000637158 USP31Q70CQ4 1352 aa25.93■■□□□ 1.74
CTSD-209ENST00000637158 WNK3Q9BYP7 1800 aa25.92■■□□□ 1.74
CTSD-209ENST00000637158 NFAT5O94916 1531 aa25.92■■□□□ 1.74
CTSD-209ENST00000637158 CARD11Q9BXL7 1154 aa25.91■■□□□ 1.74
CTSD-209ENST00000637158 PTF1AQ7RTS3 328 aa25.9■■□□□ 1.74
CTSD-209ENST00000637158 HDGFL2Q7Z4V5 671 aaPredicted RBP25.9■■□□□ 1.74
CTSD-209ENST00000637158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.9■■□□□ 1.74
CTSD-209ENST00000637158 PROM2Q8N271 834 aa25.9■■□□□ 1.74
CTSD-209ENST00000637158 ANO8Q9HCE9 1232 aaPredicted RBP25.89■■□□□ 1.74
CTSD-209ENST00000637158 YY1P25490 414 aa25.88■■□□□ 1.73
CTSD-209ENST00000637158 TXNRD1Q16881 649 aa25.88■■□□□ 1.73
CTSD-209ENST00000637158 TMC1Q8TDI8 760 aa25.88■■□□□ 1.73
CTSD-209ENST00000637158 STK32BQ9NY57 414 aa25.88■■□□□ 1.73
CTSD-209ENST00000637158 RGPD5Q99666 1765 aa25.87■■□□□ 1.73
CTSD-209ENST00000637158 TNS2Q63HR2 1409 aa25.87■■□□□ 1.73
CTSD-209ENST00000637158 ERBB3P21860 1342 aa25.87■■□□□ 1.73
CTSD-209ENST00000637158 MON2Q7Z3U7 1717 aa25.86■■□□□ 1.73
CTSD-209ENST00000637158 PUS7Q96PZ0 661 aaKnown RBP25.86■■□□□ 1.73
CTSD-209ENST00000637158 NLRP2Q9NX02 1062 aa25.85■■□□□ 1.73
CTSD-209ENST00000637158 TERF2IPQ9NYB0 399 aa25.85■■□□□ 1.73
CTSD-209ENST00000637158 NME9Q86XW9 330 aa25.84■■□□□ 1.73
CTSD-209ENST00000637158 IL2RBP14784 551 aa25.83■■□□□ 1.73
CTSD-209ENST00000637158 SLC15A2Q16348 729 aa25.83■■□□□ 1.73
CTSD-209ENST00000637158 EDC4Q6P2E9 1401 aaKnown RBP25.81■■□□□ 1.72
CTSD-209ENST00000637158 USP54Q70EL1 1684 aa25.81■■□□□ 1.72
CTSD-209ENST00000637158 CD163L1Q9NR16 1453 aa25.81■■□□□ 1.72
CTSD-209ENST00000637158 SLC12A5Q9H2X9 1139 aa25.81■■□□□ 1.72
CTSD-209ENST00000637158 CASZ1Q86V15 1759 aa25.8■■□□□ 1.72
CTSD-209ENST00000637158 SLC24A1O60721 1099 aa25.8■■□□□ 1.72
CTSD-209ENST00000637158 ZBTB7AO95365 584 aa25.8■■□□□ 1.72
CTSD-209ENST00000637158 ANKRD24Q8TF21 1146 aa25.79■■□□□ 1.72
CTSD-209ENST00000637158 PDGFDQ9GZP0 370 aaPredicted RBP25.78■■□□□ 1.72
CTSD-209ENST00000637158 TONSLQ96HA7 1378 aa25.78■■□□□ 1.72
CTSD-209ENST00000637158 PTGER2P43116 358 aa25.76■■□□□ 1.71
CTSD-209ENST00000637158 ACSBG1Q96GR2 724 aa25.76■■□□□ 1.71
CTSD-209ENST00000637158 MTFR1LQ9H019 292 aa25.76■■□□□ 1.71
CTSD-209ENST00000637158 ATF5Q9Y2D1 282 aaPredicted RBP25.75■■□□□ 1.71
CTSD-209ENST00000637158 NHSQ6T4R5 1651 aa25.74■■□□□ 1.71
CTSD-209ENST00000637158 A0A1W2PP64 1363 aa25.74■■□□□ 1.71
CTSD-209ENST00000637158 IP6K1Q92551 441 aa25.74■■□□□ 1.71
CTSD-209ENST00000637158 LTN1O94822 1766 aa25.74■■□□□ 1.71
CTSD-209ENST00000637158 UTRNP46939 3433 aa25.7■■□□□ 1.71
CTSD-209ENST00000637158 COG3Q96JB2 828 aa25.69■■□□□ 1.7
CTSD-209ENST00000637158 SYT17Q9BSW7 474 aa25.68■■□□□ 1.7
CTSD-209ENST00000637158 FHDC1Q9C0D6 1143 aaPredicted RBP25.67■■□□□ 1.7
CTSD-209ENST00000637158 SLC27A3Q5K4L6 730 aa25.66■■□□□ 1.7
CTSD-209ENST00000637158 SGIP1Q9BQI5 828 aa25.66■■□□□ 1.7
CTSD-209ENST00000637158 MYOM1P52179 1685 aa25.65■■□□□ 1.7
CTSD-209ENST00000637158 DDX54Q8TDD1 881 aaKnown RBP25.65■■□□□ 1.7
CTSD-209ENST00000637158 ST20-MTHFSA0A0A6YYL1 179 aa25.64■■□□□ 1.7
CTSD-209ENST00000637158 AMPHP49418 695 aa25.64■■□□□ 1.7
CTSD-209ENST00000637158 LTV1Q96GA3 475 aaPredicted RBP25.64■■□□□ 1.7
CTSD-209ENST00000637158 ARXQ96QS3 562 aa25.64■■□□□ 1.7
CTSD-209ENST00000637158 TESK2Q96S53 571 aa25.64■■□□□ 1.7
CTSD-209ENST00000637158 FAM208AQ9UK61 1670 aaKnown RBP25.62■■□□□ 1.69
CTSD-209ENST00000637158 SLC16A10Q8TF71 515 aa25.62■■□□□ 1.69
CTSD-209ENST00000637158 BTAF1O14981 1849 aa25.62■■□□□ 1.69
CTSD-209ENST00000637158 KAT6BQ8WYB5 2073 aa25.62■■□□□ 1.69
CTSD-209ENST00000637158 HOXC9P31274 260 aa25.61■■□□□ 1.69
CTSD-209ENST00000637158 LRRC4BQ9NT99 713 aa25.61■■□□□ 1.69
CTSD-209ENST00000637158 PAPPAQ13219 1627 aa25.61■■□□□ 1.69
CTSD-209ENST00000637158 MAP3K19Q56UN5 1328 aa25.61■■□□□ 1.69
CTSD-209ENST00000637158 MAP3K5Q99683 1374 aa25.59■■□□□ 1.69
CTSD-209ENST00000637158 ZNF827Q17R98 1081 aa25.59■■□□□ 1.69
CTSD-209ENST00000637158 AKT1S1Q96B36 256 aa25.58■■□□□ 1.69
CTSD-209ENST00000637158 SYTL4Q96C24 671 aaPredicted RBP25.58■■□□□ 1.69
CTSD-209ENST00000637158 ANKRD36BQ8N2N9 1353 aa25.57■■□□□ 1.68
CTSD-209ENST00000637158 ZCRB1Q8TBF4 217 aaKnown RBP25.57■■□□□ 1.68
CTSD-209ENST00000637158 RTL1A6NKG5 1358 aa25.56■■□□□ 1.68
CTSD-209ENST00000637158 POLD1P28340 1107 aa25.55■■□□□ 1.68
CTSD-209ENST00000637158 PRIM1P49642 420 aaKnown RBP25.55■■□□□ 1.68
CTSD-209ENST00000637158 TMF1P82094 1093 aa25.55■■□□□ 1.68
CTSD-209ENST00000637158 CGNL1Q0VF96 1302 aa25.55■■□□□ 1.68
CTSD-209ENST00000637158 HMGB2P26583 209 aaKnown RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms