RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 EDC4Q6P2E9 1401 aaKnown RBP25.2■■□□□ 1.62
PNKP-225ENST00000636214 NINLQ9Y2I6 1382 aa25.19■■□□□ 1.62
PNKP-225ENST00000636214 COL18A1P39060 1754 aa25.19■■□□□ 1.62
PNKP-225ENST00000636214 C11orf95C9JLR9 678 aaPredicted RBP25.19■■□□□ 1.62
PNKP-225ENST00000636214 TNS1Q9HBL0 1735 aaKnown RBP25.19■■□□□ 1.62
PNKP-225ENST00000636214 DISP2A7MBM2 1401 aa25.18■■□□□ 1.62
PNKP-225ENST00000636214 NFAT5O94916 1531 aa25.17■■□□□ 1.62
PNKP-225ENST00000636214 CD163L1Q9NR16 1453 aa25.17■■□□□ 1.62
PNKP-225ENST00000636214 NME9Q86XW9 330 aa25.17■■□□□ 1.62
PNKP-225ENST00000636214 AXIN2Q9Y2T1 843 aa25.17■■□□□ 1.62
PNKP-225ENST00000636214 USP31Q70CQ4 1352 aa25.17■■□□□ 1.62
PNKP-225ENST00000636214 APBA3O96018 575 aa25.16■■□□□ 1.62
PNKP-225ENST00000636214 DDB1Q16531 1140 aa25.16■■□□□ 1.62
PNKP-225ENST00000636214 CDCA7Q9BWT1 371 aaPredicted RBP25.16■■□□□ 1.62
PNKP-225ENST00000636214 A0A1W2PP64 1363 aa25.16■■□□□ 1.62
PNKP-225ENST00000636214 TESK2Q96S53 571 aa25.15■■□□□ 1.62
PNKP-225ENST00000636214 ABCC6O95255 1503 aa25.15■■□□□ 1.62
PNKP-225ENST00000636214 RGPD5Q99666 1765 aa25.15■■□□□ 1.62
PNKP-225ENST00000636214 PCGF6Q9BYE7 350 aa25.14■■□□□ 1.62
PNKP-225ENST00000636214 USP54Q70EL1 1684 aa25.13■■□□□ 1.61
PNKP-225ENST00000636214 OVOS2A0A0G2JMS6 1433 aa25.13■■□□□ 1.61
PNKP-225ENST00000636214 OVOS2A0A0J9YW53 1432 aa25.13■■□□□ 1.61
PNKP-225ENST00000636214 OVOS2Q6IE36 1432 aa25.13■■□□□ 1.61
PNKP-225ENST00000636214 USP47Q96K76 1375 aa25.13■■□□□ 1.61
PNKP-225ENST00000636214 TMF1P82094 1093 aa25.12■■□□□ 1.61
PNKP-225ENST00000636214 CARD10Q9BWT7 1032 aa25.12■■□□□ 1.61
PNKP-225ENST00000636214 PARD3Q8TEW0 1356 aa25.12■■□□□ 1.61
PNKP-225ENST00000636214 PSDA5PKW4 1024 aaPredicted RBP25.11■■□□□ 1.61
PNKP-225ENST00000636214 EZH2Q15910 746 aaKnown RBP25.11■■□□□ 1.61
PNKP-225ENST00000636214 WNK3Q9BYP7 1800 aa25.11■■□□□ 1.61
PNKP-225ENST00000636214 LRRC37A3O60309 1634 aa25.11■■□□□ 1.61
PNKP-225ENST00000636214 CLSPNQ9HAW4 1339 aa25.1■■□□□ 1.61
PNKP-225ENST00000636214 CCDC7Q96M83 1385 aa25.09■■□□□ 1.61
PNKP-225ENST00000636214 LTN1O94822 1766 aa25.09■■□□□ 1.61
PNKP-225ENST00000636214 CDCA8Q53HL2 280 aa25.09■■□□□ 1.61
PNKP-225ENST00000636214 TIMELESSQ9UNS1 1208 aa25.09■■□□□ 1.61
PNKP-225ENST00000636214 CAMKK2Q96RR4 588 aa25.07■■□□□ 1.6
PNKP-225ENST00000636214 COG3Q96JB2 828 aa25.06■■□□□ 1.6
PNKP-225ENST00000636214 NLRP2Q9NX02 1062 aa25.06■■□□□ 1.6
PNKP-225ENST00000636214 ERBB3P21860 1342 aa25.05■■□□□ 1.6
PNKP-225ENST00000636214 EXOC5O00471 708 aa25.04■■□□□ 1.6
PNKP-225ENST00000636214 R3HDM1Q15032 1099 aaKnown RBP25.04■■□□□ 1.6
PNKP-225ENST00000636214 ANKRD36BQ8N2N9 1353 aa25.04■■□□□ 1.6
PNKP-225ENST00000636214 NBPF14Q5TI25 921 aa25.03■■□□□ 1.6
PNKP-225ENST00000636214 ANKRD24Q8TF21 1146 aa25.02■■□□□ 1.6
PNKP-225ENST00000636214 PEAK1Q9H792 1746 aa25■■□□□ 1.59
PNKP-225ENST00000636214 LRP5O75197 1615 aa25■■□□□ 1.59
PNKP-225ENST00000636214 SBF2Q86WG5 1849 aa24.99■■□□□ 1.59
PNKP-225ENST00000636214 MARCH10Q8NA82 808 aaPredicted RBP24.99■■□□□ 1.59
PNKP-225ENST00000636214 RREB1Q92766 1687 aa24.99■■□□□ 1.59
PNKP-225ENST00000636214 TNS2Q63HR2 1409 aa24.97■■□□□ 1.59
PNKP-225ENST00000636214 IL2RBP14784 551 aa24.97■■□□□ 1.59
PNKP-225ENST00000636214 AMPHP49418 695 aa24.97■■□□□ 1.59
PNKP-225ENST00000636214 BCL11BQ9C0K0 894 aaPredicted RBP24.97■■□□□ 1.59
PNKP-225ENST00000636214 IP6K1Q92551 441 aa24.96■■□□□ 1.59
PNKP-225ENST00000636214 NUP188Q5SRE5 1749 aa24.95■■□□□ 1.59
PNKP-225ENST00000636214 LTV1Q96GA3 475 aaPredicted RBP24.95■■□□□ 1.58
PNKP-225ENST00000636214 BCL9O00512 1426 aa24.95■■□□□ 1.58
PNKP-225ENST00000636214 KAT6BQ8WYB5 2073 aa24.94■■□□□ 1.58
PNKP-225ENST00000636214 CCER1Q8TC90 406 aaPredicted RBP24.94■■□□□ 1.58
PNKP-225ENST00000636214 RGPD3A6NKT7 1758 aaPredicted RBP24.93■■□□□ 1.58
PNKP-225ENST00000636214 RGPD4Q7Z3J3 1758 aa24.93■■□□□ 1.58
PNKP-225ENST00000636214 FAM208AQ9UK61 1670 aaKnown RBP24.93■■□□□ 1.58
PNKP-225ENST00000636214 MAP3K19Q56UN5 1328 aa24.92■■□□□ 1.58
PNKP-225ENST00000636214 PLSCR1O15162 318 aa24.92■■□□□ 1.58
PNKP-225ENST00000636214 GGNBP2Q9H3C7 697 aa24.91■■□□□ 1.58
PNKP-225ENST00000636214 HOXC9P31274 260 aa24.9■■□□□ 1.58
PNKP-225ENST00000636214 RTL1A6NKG5 1358 aa24.89■■□□□ 1.57
PNKP-225ENST00000636214 KIF20BQ96Q89 1820 aa24.89■■□□□ 1.57
PNKP-225ENST00000636214 FYB1O15117 783 aa24.88■■□□□ 1.57
PNKP-225ENST00000636214 SMG6Q86US8 1419 aaKnown RBP24.86■■□□□ 1.57
PNKP-225ENST00000636214 POLR3GLQ9BT43 218 aa24.86■■□□□ 1.57
PNKP-225ENST00000636214 RRS1Q15050 365 aaKnown RBP24.85■■□□□ 1.57
PNKP-225ENST00000636214 PTF1AQ7RTS3 328 aa24.85■■□□□ 1.57
PNKP-225ENST00000636214 ACSBG1Q96GR2 724 aa24.85■■□□□ 1.57
PNKP-225ENST00000636214 FBLN1P23142 703 aa24.84■■□□□ 1.57
PNKP-225ENST00000636214 NSD3Q9BZ95 1437 aa24.84■■□□□ 1.57
PNKP-225ENST00000636214 NHSQ6T4R5 1651 aa24.83■■□□□ 1.57
PNKP-225ENST00000636214 MYOM1P52179 1685 aa24.82■■□□□ 1.56
PNKP-225ENST00000636214 EIF4G2P78344 907 aaKnown RBP eCLIP24.81■■□□□ 1.56
PNKP-225ENST00000636214 DDX54Q8TDD1 881 aaKnown RBP24.81■■□□□ 1.56
PNKP-225ENST00000636214 KCNQ2O43526 872 aa24.8■■□□□ 1.56
PNKP-225ENST00000636214 TXNRD1Q16881 649 aa24.8■■□□□ 1.56
PNKP-225ENST00000636214 STK32BQ9NY57 414 aa24.79■■□□□ 1.56
PNKP-225ENST00000636214 SPON1Q9HCB6 807 aa24.78■■□□□ 1.56
PNKP-225ENST00000636214 PPP1R1BQ9UD71 204 aaPredicted RBP24.78■■□□□ 1.56
PNKP-225ENST00000636214 CGNL1Q0VF96 1302 aa24.78■■□□□ 1.56
PNKP-225ENST00000636214 FLT4P35916 1363 aa24.78■■□□□ 1.56
PNKP-225ENST00000636214 RGPD2P0DJD1 1756 aa24.77■■□□□ 1.56
PNKP-225ENST00000636214 ANO8Q9HCE9 1232 aaPredicted RBP24.77■■□□□ 1.56
PNKP-225ENST00000636214 KIF24Q5T7B8 1368 aa24.77■■□□□ 1.56
PNKP-225ENST00000636214 RAPGEF4Q8WZA2 1011 aa24.76■■□□□ 1.55
PNKP-225ENST00000636214 CARD14Q9BXL6 1004 aa24.76■■□□□ 1.55
PNKP-225ENST00000636214 PROM2Q8N271 834 aa24.75■■□□□ 1.55
PNKP-225ENST00000636214 ZCRB1Q8TBF4 217 aaKnown RBP24.75■■□□□ 1.55
PNKP-225ENST00000636214 BTAF1O14981 1849 aa24.75■■□□□ 1.55
PNKP-225ENST00000636214 HSPA5P11021 654 aaKnown RBP24.74■■□□□ 1.55
PNKP-225ENST00000636214 INSRP06213 1382 aa24.74■■□□□ 1.55
PNKP-225ENST00000636214 NBPF6Q5VWK0 638 aa24.73■■□□□ 1.55
PNKP-225ENST00000636214 SYTL4Q96C24 671 aaPredicted RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms