RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 TRIM67Q6ZTA4 783 aa4.32□□□□□ -1.72
CD46-219ENST00000636114 CDK15Q96Q40 435 aa4.32□□□□□ -1.72
CD46-219ENST00000636114 MAP4K5Q9Y4K4 846 aa4.32□□□□□ -1.72
CD46-219ENST00000636114 TLL2Q9Y6L7 1015 aa4.32□□□□□ -1.72
CD46-219ENST00000636114 POM121CA8CG34 1229 aa4.31□□□□□ -1.72
CD46-219ENST00000636114 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
CD46-219ENST00000636114 KRTAP4-8Q9BYQ9 185 aa4.31□□□□□ -1.72
CD46-219ENST00000636114 ARID5BQ14865 1188 aa4.31□□□□□ -1.72
CD46-219ENST00000636114 VASH1Q7L8A9 365 aaPredicted RBP4.31□□□□□ -1.72
CD46-219ENST00000636114 CYP4X1Q8N118 509 aa4.31□□□□□ -1.72
CD46-219ENST00000636114 SNIP1Q8TAD8 396 aaKnown RBP4.31□□□□□ -1.72
CD46-219ENST00000636114 PDZRN3Q9UPQ7 1066 aa4.31□□□□□ -1.72
CD46-219ENST00000636114 TTC24A2A3L6 582 aaPredicted RBP4.3□□□□□ -1.72
CD46-219ENST00000636114 ADH1CP00326 375 aa4.3□□□□□ -1.72
CD46-219ENST00000636114 ALDH1A1P00352 501 aa4.3□□□□□ -1.72
CD46-219ENST00000636114 GLMNQ92990 594 aa4.3□□□□□ -1.72
CD46-219ENST00000636114 ALG2Q9H553 416 aa4.3□□□□□ -1.72
CD46-219ENST00000636114 TOR4AQ9NXH8 423 aa4.3□□□□□ -1.72
CD46-219ENST00000636114 ZNF777Q9ULD5 760 aaPredicted RBP4.3□□□□□ -1.72
CD46-219ENST00000636114 ADAMTS19Q8TE59 1207 aa4.3□□□□□ -1.72
CD46-219ENST00000636114 CALR3Q96L12 384 aaKnown RBP4.3□□□□□ -1.72
CD46-219ENST00000636114 KCTD15Q96SI1 283 aaPredicted RBP4.3□□□□□ -1.72
CD46-219ENST00000636114 ESPNB1AK53 854 aa4.29□□□□□ -1.72
CD46-219ENST00000636114 FSHRP23945 695 aa4.29□□□□□ -1.72
CD46-219ENST00000636114 NR5A1Q13285 461 aa4.29□□□□□ -1.72
CD46-219ENST00000636114 HDGFL1Q5TGJ6 251 aa4.29□□□□□ -1.72
CD46-219ENST00000636114 SEPT12Q8IYM1 358 aa4.29□□□□□ -1.72
CD46-219ENST00000636114 CEP126Q9P2H0 1117 aa4.29□□□□□ -1.72
CD46-219ENST00000636114 WASF2Q9Y6W5 498 aa4.29□□□□□ -1.72
CD46-219ENST00000636114 GRM5P41594 1212 aa4.28□□□□□ -1.72
CD46-219ENST00000636114 SLFNL1Q499Z3 407 aa4.28□□□□□ -1.72
CD46-219ENST00000636114 RNF20Q5VTR2 975 aa4.28□□□□□ -1.72
CD46-219ENST00000636114 CCDC125Q86Z20 511 aa4.28□□□□□ -1.72
CD46-219ENST00000636114 ARID3CA6NKF2 412 aa4.28□□□□□ -1.72
CD46-219ENST00000636114 GIGYF1O75420 1035 aaPredicted RBP4.28□□□□□ -1.72
CD46-219ENST00000636114 INTS6LQ5JSJ4 861 aaKnown RBP4.28□□□□□ -1.72
CD46-219ENST00000636114 J3QL48 77 aa4.27□□□□□ -1.73
CD46-219ENST00000636114 NRG2O14511 850 aaPredicted RBP4.27□□□□□ -1.73
CD46-219ENST00000636114 SMPD1P17405 629 aa4.27□□□□□ -1.73
CD46-219ENST00000636114 DHX9Q08211 1270 aaKnown RBP4.27□□□□□ -1.73
CD46-219ENST00000636114 NFATC2IPQ8NCF5 419 aa4.27□□□□□ -1.73
CD46-219ENST00000636114 GFRA3O60609 400 aa4.26□□□□□ -1.73
CD46-219ENST00000636114 NNTQ13423 1086 aa4.26□□□□□ -1.73
CD46-219ENST00000636114 RNF135Q8IUD6 432 aa4.26□□□□□ -1.73
CD46-219ENST00000636114 CCDC116Q8IYX3 515 aa4.26□□□□□ -1.73
CD46-219ENST00000636114 ABCC9O60706 1549 aa4.26□□□□□ -1.73
CD46-219ENST00000636114 RB1CC1Q8TDY2 1594 aa4.26□□□□□ -1.73
CD46-219ENST00000636114 NR3C2P08235 984 aa4.26□□□□□ -1.73
CD46-219ENST00000636114 RAB15P59190 212 aa4.26□□□□□ -1.73
CD46-219ENST00000636114 PHTF2Q8N3S3 785 aa4.26□□□□□ -1.73
CD46-219ENST00000636114 TRIM52Q96A61 297 aa4.26□□□□□ -1.73
CD46-219ENST00000636114 UCN2Q96RP3 112 aa4.26□□□□□ -1.73
CD46-219ENST00000636114 FAM187AA6NFU0 413 aa4.25□□□□□ -1.73
CD46-219ENST00000636114 ERVH48-1M5A8F1 160 aa4.25□□□□□ -1.73
CD46-219ENST00000636114 CCDC97Q96F63 343 aaPredicted RBP4.25□□□□□ -1.73
CD46-219ENST00000636114 C1orf115Q9H7X2 142 aa4.25□□□□□ -1.73
CD46-219ENST00000636114 CHIC2Q9UKJ5 165 aa4.25□□□□□ -1.73
CD46-219ENST00000636114 EMILIN1Q9Y6C2 1016 aa4.25□□□□□ -1.73
CD46-219ENST00000636114 PIK3CDO00329 1044 aa4.25□□□□□ -1.73
CD46-219ENST00000636114 MAP7D1Q3KQU3 841 aa4.25□□□□□ -1.73
CD46-219ENST00000636114 PKDCCQ504Y2 493 aa4.25□□□□□ -1.73
CD46-219ENST00000636114 PPP1R26Q5T8A7 1209 aaPredicted RBP4.25□□□□□ -1.73
CD46-219ENST00000636114 Q6ZNB5 142 aa4.25□□□□□ -1.73
CD46-219ENST00000636114 PLPP7Q8NBV4 271 aa4.25□□□□□ -1.73
CD46-219ENST00000636114 CCDC85AQ96PX6 553 aaPredicted RBP4.25□□□□□ -1.73
CD46-219ENST00000636114 PGPEP1Q9NXJ5 209 aa4.25□□□□□ -1.73
CD46-219ENST00000636114 SERPINA10Q9UK55 444 aa4.25□□□□□ -1.73
CD46-219ENST00000636114 DOLKQ9UPQ8 538 aa4.25□□□□□ -1.73
CD46-219ENST00000636114 PCDHB11Q9Y5F2 797 aa4.25□□□□□ -1.73
CD46-219ENST00000636114 ATP9BO43861 1147 aa4.24□□□□□ -1.73
CD46-219ENST00000636114 DGAT1O75907 488 aa4.24□□□□□ -1.73
CD46-219ENST00000636114 SKIP12755 728 aa4.24□□□□□ -1.73
CD46-219ENST00000636114 CCDC82Q8N4S0 544 aa4.24□□□□□ -1.73
CD46-219ENST00000636114 HPS1Q92902 700 aa4.24□□□□□ -1.73
CD46-219ENST00000636114 PPP1R12CQ9BZL4 782 aa4.24□□□□□ -1.73
CD46-219ENST00000636114 SCRIBQ14160 1630 aa4.24□□□□□ -1.73
CD46-219ENST00000636114 PALM3A6NDB9 673 aaPredicted RBP4.23□□□□□ -1.73
CD46-219ENST00000636114 USP17L5A8MUK1 530 aa4.23□□□□□ -1.73
CD46-219ENST00000636114 ZIC2O95409 532 aaPredicted RBP4.23□□□□□ -1.73
CD46-219ENST00000636114 AVPP01185 164 aa4.23□□□□□ -1.73
CD46-219ENST00000636114 SUZ12Q15022 739 aaKnown RBP4.23□□□□□ -1.73
CD46-219ENST00000636114 TRAF7Q6Q0C0 670 aa4.23□□□□□ -1.73
CD46-219ENST00000636114 TBC1D9Q6ZT07 1266 aa4.23□□□□□ -1.73
CD46-219ENST00000636114 ZNF784Q8NCA9 323 aaPredicted RBP4.23□□□□□ -1.73
CD46-219ENST00000636114 KLF16Q9BXK1 252 aaPredicted RBP4.23□□□□□ -1.73
CD46-219ENST00000636114 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
CD46-219ENST00000636114 LZTS3O60299 673 aaPredicted RBP4.23□□□□□ -1.73
CD46-219ENST00000636114 TIMP2P16035 220 aa4.23□□□□□ -1.73
CD46-219ENST00000636114 WDR4P57081 412 aaKnown RBP4.23□□□□□ -1.73
CD46-219ENST00000636114 PLEKHM2Q8IWE5 1019 aa4.23□□□□□ -1.73
CD46-219ENST00000636114 ITPKCQ96DU7 683 aa4.23□□□□□ -1.73
CD46-219ENST00000636114 TMPRSS4Q9NRS4 437 aa4.23□□□□□ -1.73
CD46-219ENST00000636114 TFIP11Q9UBB9 837 aaKnown RBP4.23□□□□□ -1.73
CD46-219ENST00000636114 MAFBQ9Y5Q3 323 aaPredicted RBP4.23□□□□□ -1.73
CD46-219ENST00000636114 USP17L3A6NCW0 530 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 USP17L4A6NCW7 530 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 MYCP01106 439 aaPredicted RBP4.22□□□□□ -1.73
CD46-219ENST00000636114 ERVK-9P63128 1117 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 MYT1Q01538 1121 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 CTC1Q2NKJ3 1217 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms