RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 TERF2IPQ9NYB0 399 aa25.74■■□□□ 1.71
PNKP-224ENST00000631020 A0A1W2PP64 1363 aa25.74■■□□□ 1.71
PNKP-224ENST00000631020 USP31Q70CQ4 1352 aa25.74■■□□□ 1.71
PNKP-224ENST00000631020 ABCC6O95255 1503 aa25.74■■□□□ 1.71
PNKP-224ENST00000631020 TCP11L2Q8N4U5 519 aa25.73■■□□□ 1.71
PNKP-224ENST00000631020 CRB1P82279 1406 aa25.73■■□□□ 1.71
PNKP-224ENST00000631020 NFAT5O94916 1531 aa25.73■■□□□ 1.71
PNKP-224ENST00000631020 RGPD1P0DJD0 1748 aa25.73■■□□□ 1.71
PNKP-224ENST00000631020 EDC4Q6P2E9 1401 aaKnown RBP25.73■■□□□ 1.71
PNKP-224ENST00000631020 ANKRD36BQ8N2N9 1353 aa25.72■■□□□ 1.71
PNKP-224ENST00000631020 ARHGEF25Q86VW2 580 aa25.72■■□□□ 1.71
PNKP-224ENST00000631020 CARD14Q9BXL6 1004 aa25.71■■□□□ 1.71
PNKP-224ENST00000631020 PANK3Q9H999 370 aa25.71■■□□□ 1.71
PNKP-224ENST00000631020 PARP4Q9UKK3 1724 aaKnown RBP25.7■■□□□ 1.7
PNKP-224ENST00000631020 USP35Q9P2H5 1018 aa25.7■■□□□ 1.7
PNKP-224ENST00000631020 ZRANB1Q9UGI0 708 aa25.68■■□□□ 1.7
PNKP-224ENST00000631020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.67■■□□□ 1.7
PNKP-224ENST00000631020 RGPD5Q99666 1765 aa25.66■■□□□ 1.7
PNKP-224ENST00000631020 ZBTB7CA1YPR0 619 aa25.66■■□□□ 1.7
PNKP-224ENST00000631020 WDR17Q8IZU2 1322 aa25.66■■□□□ 1.7
PNKP-224ENST00000631020 FAM196AQ6ZSG2 479 aa25.65■■□□□ 1.7
PNKP-224ENST00000631020 TNS1Q9HBL0 1735 aaKnown RBP25.65■■□□□ 1.7
PNKP-224ENST00000631020 DISP2A7MBM2 1401 aa25.64■■□□□ 1.7
PNKP-224ENST00000631020 BAG6P46379 1132 aa25.64■■□□□ 1.7
PNKP-224ENST00000631020 DEFB132Q7Z7B7 95 aa25.64■■□□□ 1.7
PNKP-224ENST00000631020 AXIN2Q9Y2T1 843 aa25.64■■□□□ 1.7
PNKP-224ENST00000631020 WNK3Q9BYP7 1800 aa25.64■■□□□ 1.69
PNKP-224ENST00000631020 PDE3BQ13370 1112 aa25.63■■□□□ 1.69
PNKP-224ENST00000631020 NME9Q86XW9 330 aa25.63■■□□□ 1.69
PNKP-224ENST00000631020 FAM182BQ5T319 152 aa25.62■■□□□ 1.69
PNKP-224ENST00000631020 TOM1L2Q6ZVM7 507 aa25.62■■□□□ 1.69
PNKP-224ENST00000631020 LTN1O94822 1766 aa25.61■■□□□ 1.69
PNKP-224ENST00000631020 OVOS2A0A0J9YW53 1432 aa25.61■■□□□ 1.69
PNKP-224ENST00000631020 OVOS2Q6IE36 1432 aa25.61■■□□□ 1.69
PNKP-224ENST00000631020 DDX10Q13206 875 aaKnown RBP25.61■■□□□ 1.69
PNKP-224ENST00000631020 SOX12O15370 315 aa25.6■■□□□ 1.69
PNKP-224ENST00000631020 PER1O15534 1290 aaPredicted RBP25.6■■□□□ 1.69
PNKP-224ENST00000631020 NSD3Q9BZ95 1437 aa25.6■■□□□ 1.69
PNKP-224ENST00000631020 CDCA7Q9BWT1 371 aaPredicted RBP25.59■■□□□ 1.69
PNKP-224ENST00000631020 LRRC37A3O60309 1634 aa25.58■■□□□ 1.69
PNKP-224ENST00000631020 CARD10Q9BWT7 1032 aa25.58■■□□□ 1.68
PNKP-224ENST00000631020 FYB1O15117 783 aa25.56■■□□□ 1.68
PNKP-224ENST00000631020 PEAK1Q9H792 1746 aa25.55■■□□□ 1.68
PNKP-224ENST00000631020 CSB-PGBD3P0DP91 1061 aa25.53■■□□□ 1.68
PNKP-224ENST00000631020 KNSTRNQ9Y448 316 aa25.53■■□□□ 1.68
PNKP-224ENST00000631020 PARD3Q8TEW0 1356 aa25.53■■□□□ 1.68
PNKP-224ENST00000631020 ERBB3P21860 1342 aa25.53■■□□□ 1.68
PNKP-224ENST00000631020 TRIM37O94972 964 aa25.53■■□□□ 1.68
PNKP-224ENST00000631020 DDB1Q16531 1140 aa25.53■■□□□ 1.68
PNKP-224ENST00000631020 OVOS2A0A0G2JMS6 1433 aa25.52■■□□□ 1.68
PNKP-224ENST00000631020 SRCAPQ6ZRS2 3230 aa25.52■■□□□ 1.68
PNKP-224ENST00000631020 CGNL1Q0VF96 1302 aa25.51■■□□□ 1.67
PNKP-224ENST00000631020 EN1Q05925 392 aaPredicted RBP25.51■■□□□ 1.67
PNKP-224ENST00000631020 GGNBP2Q9H3C7 697 aa25.51■■□□□ 1.67
PNKP-224ENST00000631020 AMER1Q5JTC6 1135 aaPredicted RBP25.5■■□□□ 1.67
PNKP-224ENST00000631020 COG3Q96JB2 828 aa25.5■■□□□ 1.67
PNKP-224ENST00000631020 BCL9O00512 1426 aa25.49■■□□□ 1.67
PNKP-224ENST00000631020 SBF2Q86WG5 1849 aa25.49■■□□□ 1.67
PNKP-224ENST00000631020 FAM208AQ9UK61 1670 aaKnown RBP25.48■■□□□ 1.67
PNKP-224ENST00000631020 CAMKK2Q96RR4 588 aa25.47■■□□□ 1.67
PNKP-224ENST00000631020 APBA3O96018 575 aa25.46■■□□□ 1.67
PNKP-224ENST00000631020 RREB1Q92766 1687 aa25.46■■□□□ 1.67
PNKP-224ENST00000631020 IP6K1Q92551 441 aa25.45■■□□□ 1.66
PNKP-224ENST00000631020 RGPD3A6NKT7 1758 aaPredicted RBP25.45■■□□□ 1.66
PNKP-224ENST00000631020 RGPD4Q7Z3J3 1758 aa25.45■■□□□ 1.66
PNKP-224ENST00000631020 KIF20BQ96Q89 1820 aa25.44■■□□□ 1.66
PNKP-224ENST00000631020 TNS2Q63HR2 1409 aa25.43■■□□□ 1.66
PNKP-224ENST00000631020 EZH2Q15910 746 aaKnown RBP25.43■■□□□ 1.66
PNKP-224ENST00000631020 ANKRD24Q8TF21 1146 aa25.43■■□□□ 1.66
PNKP-224ENST00000631020 EXOC5O00471 708 aa25.42■■□□□ 1.66
PNKP-224ENST00000631020 CC2D1BQ5T0F9 858 aaKnown RBP25.42■■□□□ 1.66
PNKP-224ENST00000631020 NLRP2Q9NX02 1062 aa25.42■■□□□ 1.66
PNKP-224ENST00000631020 MARCH10Q8NA82 808 aaPredicted RBP25.41■■□□□ 1.66
PNKP-224ENST00000631020 RTL1A6NKG5 1358 aa25.41■■□□□ 1.66
PNKP-224ENST00000631020 NPC1L1Q9UHC9 1359 aa25.41■■□□□ 1.66
PNKP-224ENST00000631020 FBLN1P23142 703 aa25.4■■□□□ 1.66
PNKP-224ENST00000631020 CNGB1Q14028 1251 aaPredicted RBP25.4■■□□□ 1.66
PNKP-224ENST00000631020 MAP3K19Q56UN5 1328 aa25.4■■□□□ 1.66
PNKP-224ENST00000631020 NSD2O96028 1365 aa25.4■■□□□ 1.66
PNKP-224ENST00000631020 LRP5O75197 1615 aa25.39■■□□□ 1.65
PNKP-224ENST00000631020 NUP188Q5SRE5 1749 aa25.39■■□□□ 1.65
PNKP-224ENST00000631020 IL2RBP14784 551 aa25.37■■□□□ 1.65
PNKP-224ENST00000631020 BCL11BQ9C0K0 894 aaPredicted RBP25.37■■□□□ 1.65
PNKP-224ENST00000631020 HOXC9P31274 260 aa25.37■■□□□ 1.65
PNKP-224ENST00000631020 PLSCR1O15162 318 aa25.36■■□□□ 1.65
PNKP-224ENST00000631020 AMPHP49418 695 aa25.36■■□□□ 1.65
PNKP-224ENST00000631020 MORC1Q86VD1 984 aa25.36■■□□□ 1.65
PNKP-224ENST00000631020 KIF24Q5T7B8 1368 aa25.35■■□□□ 1.65
PNKP-224ENST00000631020 ANKRD26Q9UPS8 1709 aa25.35■■□□□ 1.65
PNKP-224ENST00000631020 TNNT2P45379 298 aaPredicted RBP25.33■■□□□ 1.65
PNKP-224ENST00000631020 PSDA5PKW4 1024 aaPredicted RBP25.32■■□□□ 1.64
PNKP-224ENST00000631020 NHSQ6T4R5 1651 aa25.31■■□□□ 1.64
PNKP-224ENST00000631020 R3HDM1Q15032 1099 aaKnown RBP25.3■■□□□ 1.64
PNKP-224ENST00000631020 RGPD2P0DJD1 1756 aa25.3■■□□□ 1.64
PNKP-224ENST00000631020 RRS1Q15050 365 aaKnown RBP25.29■■□□□ 1.64
PNKP-224ENST00000631020 NBPF14Q5TI25 921 aa25.29■■□□□ 1.64
PNKP-224ENST00000631020 LTV1Q96GA3 475 aaPredicted RBP25.28■■□□□ 1.64
PNKP-224ENST00000631020 SMG6Q86US8 1419 aaKnown RBP25.28■■□□□ 1.64
PNKP-224ENST00000631020 INSRP06213 1382 aa25.27■■□□□ 1.64
PNKP-224ENST00000631020 FLT4P35916 1363 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms