RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 GRM5P41594 1212 aa7.2□□□□□ -1.26
SRP54-214ENST00000630962 WASHC4Q2M389 1173 aa7.2□□□□□ -1.26
SRP54-214ENST00000630962 RNF20Q5VTR2 975 aa7.2□□□□□ -1.26
SRP54-214ENST00000630962 CCDC116Q8IYX3 515 aa7.2□□□□□ -1.26
SRP54-214ENST00000630962 KCTD15Q96SI1 283 aaPredicted RBP7.2□□□□□ -1.26
SRP54-214ENST00000630962 FSHRP23945 695 aa7.19□□□□□ -1.26
SRP54-214ENST00000630962 RAD21O60216 631 aa7.18□□□□□ -1.26
SRP54-214ENST00000630962 UPP2O95045 317 aa7.18□□□□□ -1.26
SRP54-214ENST00000630962 WDR4P57081 412 aaKnown RBP7.18□□□□□ -1.26
SRP54-214ENST00000630962 EIF4G2P78344 907 aaKnown RBP eCLIP7.18□□□□□ -1.26
SRP54-214ENST00000630962 SCARF1Q14162 830 aa7.18□□□□□ -1.26
SRP54-214ENST00000630962 MCM6Q14566 821 aa7.18□□□□□ -1.26
SRP54-214ENST00000630962 ZNF787Q6DD87 383 aa7.18□□□□□ -1.26
SRP54-214ENST00000630962 FBXO45P0C2W1 286 aa7.17□□□□□ -1.26
SRP54-214ENST00000630962 SOX11P35716 441 aa7.17□□□□□ -1.26
SRP54-214ENST00000630962 OCSTAMPQ9BR26 566 aa7.17□□□□□ -1.26
SRP54-214ENST00000630962 PCDHB9Q9Y5E1 797 aa7.17□□□□□ -1.26
SRP54-214ENST00000630962 ST8SIA5O15466 376 aa7.16□□□□□ -1.26
SRP54-214ENST00000630962 ZIC2O95409 532 aaPredicted RBP7.16□□□□□ -1.26
SRP54-214ENST00000630962 TIMP2P16035 220 aa7.16□□□□□ -1.26
SRP54-214ENST00000630962 ATP13A2Q9NQ11 1180 aa7.16□□□□□ -1.26
SRP54-214ENST00000630962 LCE2BO14633 110 aa7.15□□□□□ -1.26
SRP54-214ENST00000630962 KLF16Q9BXK1 252 aaPredicted RBP7.15□□□□□ -1.26
SRP54-214ENST00000630962 TBC1D2BQ9UPU7 963 aa7.15□□□□□ -1.26
SRP54-214ENST00000630962 ESPNB1AK53 854 aa7.14□□□□□ -1.27
SRP54-214ENST00000630962 NR3C2P08235 984 aa7.13□□□□□ -1.27
SRP54-214ENST00000630962 UBTFP17480 764 aaKnown RBP7.13□□□□□ -1.27
SRP54-214ENST00000630962 INTS6LQ5JSJ4 861 aaKnown RBP7.13□□□□□ -1.27
SRP54-214ENST00000630962 PPP1R26Q5T8A7 1209 aaPredicted RBP7.13□□□□□ -1.27
SRP54-214ENST00000630962 MRPL14Q6P1L8 145 aaKnown RBP7.13□□□□□ -1.27
SRP54-214ENST00000630962 ITPKCQ96DU7 683 aa7.13□□□□□ -1.27
SRP54-214ENST00000630962 TSEN34Q9BSV6 310 aaKnown RBP7.13□□□□□ -1.27
SRP54-214ENST00000630962 C11orf95C9JLR9 678 aaPredicted RBP7.12□□□□□ -1.27
SRP54-214ENST00000630962 ABL2P42684 1182 aa7.12□□□□□ -1.27
SRP54-214ENST00000630962 TRIM47Q96LD4 638 aa7.12□□□□□ -1.27
SRP54-214ENST00000630962 ESF1Q9H501 851 aaKnown RBP7.12□□□□□ -1.27
SRP54-214ENST00000630962 GDPD2Q9HCC8 539 aa7.12□□□□□ -1.27
SRP54-214ENST00000630962 MEIOBQ8N635 442 aa7.11□□□□□ -1.27
SRP54-214ENST00000630962 GPR37L1O60883 481 aa7.1□□□□□ -1.27
SRP54-214ENST00000630962 Q6ZVU0 165 aa7.1□□□□□ -1.27
SRP54-214ENST00000630962 GMPR2Q9P2T1 348 aaKnown RBP7.1□□□□□ -1.27
SRP54-214ENST00000630962 COG6Q9Y2V7 657 aa7.1□□□□□ -1.27
SRP54-214ENST00000630962 SEMA3FQ13275 785 aa7.09□□□□□ -1.27
SRP54-214ENST00000630962 SIRT1Q96EB6 747 aa7.09□□□□□ -1.27
SRP54-214ENST00000630962 ZFAND3Q9H8U3 227 aa7.09□□□□□ -1.27
SRP54-214ENST00000630962 ERVH48-1M5A8F1 160 aa7.08□□□□□ -1.28
SRP54-214ENST00000630962 GIGYF1O75420 1035 aaPredicted RBP7.08□□□□□ -1.28
SRP54-214ENST00000630962 IRF5Q13568 498 aa7.08□□□□□ -1.28
SRP54-214ENST00000630962 SLFNL1Q499Z3 407 aa7.08□□□□□ -1.28
SRP54-214ENST00000630962 LINC00528Q8N1L1 170 aa7.08□□□□□ -1.28
SRP54-214ENST00000630962 CEP126Q9P2H0 1117 aa7.08□□□□□ -1.28
SRP54-214ENST00000630962 DACH1Q9UI36 760 aa7.08□□□□□ -1.28
SRP54-214ENST00000630962 BMP2P12643 396 aa7.07□□□□□ -1.28
SRP54-214ENST00000630962 TRIM46Q7Z4K8 759 aa7.07□□□□□ -1.28
SRP54-214ENST00000630962 MYCP01106 439 aaPredicted RBP7.06□□□□□ -1.28
SRP54-214ENST00000630962 BMP1P13497 986 aa7.06□□□□□ -1.28
SRP54-214ENST00000630962 RAB15P59190 212 aa7.06□□□□□ -1.28
SRP54-214ENST00000630962 MAP7D1Q3KQU3 841 aa7.06□□□□□ -1.28
SRP54-214ENST00000630962 CC2D2BQ6DHV5 1058 aa7.06□□□□□ -1.28
SRP54-214ENST00000630962 ZFP42Q96MM3 310 aa7.06□□□□□ -1.28
SRP54-214ENST00000630962 ADH1AP07327 375 aa7.05□□□□□ -1.28
SRP54-214ENST00000630962 VAC14Q08AM6 782 aa7.05□□□□□ -1.28
SRP54-214ENST00000630962 NPAS3Q8IXF0 933 aa7.05□□□□□ -1.28
SRP54-214ENST00000630962 ZNF784Q8NCA9 323 aaPredicted RBP7.05□□□□□ -1.28
SRP54-214ENST00000630962 PURBQ96QR8 312 aaKnown RBP7.05□□□□□ -1.28
SRP54-214ENST00000630962 SPINT1O43278 529 aa7.04□□□□□ -1.28
SRP54-214ENST00000630962 LZTS3O60299 673 aaPredicted RBP7.04□□□□□ -1.28
SRP54-214ENST00000630962 ERVK-9P63128 1117 aa7.04□□□□□ -1.28
SRP54-214ENST00000630962 USP4Q13107 963 aa7.04□□□□□ -1.28
SRP54-214ENST00000630962 CYP2U1Q7Z449 544 aa7.04□□□□□ -1.28
SRP54-214ENST00000630962 RNF135Q8IUD6 432 aa7.04□□□□□ -1.28
SRP54-214ENST00000630962 PCDHB11Q9Y5F2 797 aa7.04□□□□□ -1.28
SRP54-214ENST00000630962 A6NJR5 290 aa7.03□□□□□ -1.28
SRP54-214ENST00000630962 MAN1A2O60476 641 aa7.03□□□□□ -1.28
SRP54-214ENST00000630962 LILRA1O75019 489 aa7.03□□□□□ -1.28
SRP54-214ENST00000630962 C6orf118Q5T5N4 469 aa7.03□□□□□ -1.28
SRP54-214ENST00000630962 NFATC2IPQ8NCF5 419 aa7.03□□□□□ -1.28
SRP54-214ENST00000630962 TMPRSS4Q9NRS4 437 aa7.03□□□□□ -1.28
SRP54-214ENST00000630962 POTECB2RU33 542 aa7.02□□□□□ -1.29
SRP54-214ENST00000630962 ATP5J2-PTCD1G3V325 749 aa7.02□□□□□ -1.29
SRP54-214ENST00000630962 PTGIRP43119 386 aa7.02□□□□□ -1.29
SRP54-214ENST00000630962 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.02□□□□□ -1.292e-6■■□□□ 13.9
SRP54-214ENST00000630962 SLC16A10Q8TF71 515 aa7.02□□□□□ -1.29
SRP54-214ENST00000630962 CYLDQ9NQC7 956 aa7.02□□□□□ -1.29
SRP54-214ENST00000630962 DOLKQ9UPQ8 538 aa7.02□□□□□ -1.29
SRP54-214ENST00000630962 SOS2Q07890 1332 aaPredicted RBP7.01□□□□□ -1.29
SRP54-214ENST00000630962 TTLL8A6PVC2 850 aa7.01□□□□□ -1.29
SRP54-214ENST00000630962 CBLBQ13191 982 aa7.01□□□□□ -1.29
SRP54-214ENST00000630962 GNRH1P01148 92 aa7□□□□□ -1.29
SRP54-214ENST00000630962 SNRPBP14678 240 aaKnown RBP7□□□□□ -1.29
SRP54-214ENST00000630962 GPC1P35052 558 aa7□□□□□ -1.29
SRP54-214ENST00000630962 RELBQ01201 579 aa7□□□□□ -1.29
SRP54-214ENST00000630962 PROSER2Q86WR7 435 aaPredicted RBP7□□□□□ -1.29
SRP54-214ENST00000630962 PHTF2Q8N3S3 785 aa7□□□□□ -1.29
SRP54-214ENST00000630962 ALG2Q9H553 416 aa7□□□□□ -1.29
SRP54-214ENST00000630962 CHIC2Q9UKJ5 165 aa7□□□□□ -1.29
SRP54-214ENST00000630962 ESCO1Q5FWF5 840 aa6.99□□□□□ -1.29
SRP54-214ENST00000630962 POM121Q96HA1 1249 aa6.99□□□□□ -1.29
SRP54-214ENST00000630962 NXF1Q9UBU9 619 aaKnown RBP6.99□□□□□ -1.29
SRP54-214ENST00000630962 TRAK2O60296 914 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms