RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 KCNA4P22459 653 aa5.03□□□□□ -1.6
SCARNA4.1-201ENST00000628597 AKT1S1Q96B36 256 aa5.03□□□□□ -1.6
SCARNA4.1-201ENST00000628597 RNF216Q9NWF9 866 aaPredicted RBP5.03□□□□□ -1.6
SCARNA4.1-201ENST00000628597 TNS3Q68CZ2 1445 aa5.03□□□□□ -1.6
SCARNA4.1-201ENST00000628597 PLCH1Q4KWH8 1693 aa5.02□□□□□ -1.61
SCARNA4.1-201ENST00000628597 PKD1L2Q7Z442 2459 aa5.02□□□□□ -1.61
SCARNA4.1-201ENST00000628597 ECE1P42892 770 aa5.02□□□□□ -1.61
SCARNA4.1-201ENST00000628597 GRM1Q13255 1194 aa5.02□□□□□ -1.61
SCARNA4.1-201ENST00000628597 MAPK8IP2Q13387 824 aaPredicted RBP5.02□□□□□ -1.61
SCARNA4.1-201ENST00000628597 RAPGEFL1Q9UHV5 662 aa5.02□□□□□ -1.61
SCARNA4.1-201ENST00000628597 GOLGB1Q14789 3259 aaKnown RBP5.02□□□□□ -1.61
SCARNA4.1-201ENST00000628597 BRD4O60885 1362 aaPredicted RBP5.02□□□□□ -1.61
SCARNA4.1-201ENST00000628597 FCHSD2O94868 740 aa5.01□□□□□ -1.61
SCARNA4.1-201ENST00000628597 CHRNA2Q15822 529 aa5.01□□□□□ -1.61
SCARNA4.1-201ENST00000628597 CCDC24Q8N4L8 307 aa5.01□□□□□ -1.61
SCARNA4.1-201ENST00000628597 GPR101Q96P66 508 aaPredicted RBP5.01□□□□□ -1.61
SCARNA4.1-201ENST00000628597 ABT1Q9ULW3 272 aaKnown RBP5.01□□□□□ -1.61
SCARNA4.1-201ENST00000628597 CICQ96RK0 1608 aaPredicted RBP5.01□□□□□ -1.61
SCARNA4.1-201ENST00000628597 CCDC18Q5T9S5 1454 aa5□□□□□ -1.61
SCARNA4.1-201ENST00000628597 GLTPD2A6NH11 291 aa5□□□□□ -1.61
SCARNA4.1-201ENST00000628597 RASSF10A6NK89 507 aa5□□□□□ -1.61
SCARNA4.1-201ENST00000628597 LARP1Q6PKG0 1096 aaKnown RBP5□□□□□ -1.61
SCARNA4.1-201ENST00000628597 MEGF6O75095 1541 aa5□□□□□ -1.61
SCARNA4.1-201ENST00000628597 RGPD3A6NKT7 1758 aaPredicted RBP5□□□□□ -1.61
SCARNA4.1-201ENST00000628597 RGPD4Q7Z3J3 1758 aa5□□□□□ -1.61
SCARNA4.1-201ENST00000628597 SBNO1A3KN83 1393 aa5□□□□□ -1.61
SCARNA4.1-201ENST00000628597 METP08581 1390 aa5□□□□□ -1.61
SCARNA4.1-201ENST00000628597 MBD5Q9P267 1494 aa5□□□□□ -1.61
SCARNA4.1-201ENST00000628597 SLC27A3Q5K4L6 730 aa4.99□□□□□ -1.61
SCARNA4.1-201ENST00000628597 DPY19L2Q6NUT2 758 aa4.99□□□□□ -1.61
SCARNA4.1-201ENST00000628597 ANKRD13DQ6ZTN6 518 aa4.99□□□□□ -1.61
SCARNA4.1-201ENST00000628597 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.99□□□□□ -1.61
SCARNA4.1-201ENST00000628597 PHF8Q9UPP1 1060 aa4.99□□□□□ -1.61
SCARNA4.1-201ENST00000628597 ABCA3Q99758 1704 aa4.99□□□□□ -1.61
SCARNA4.1-201ENST00000628597 TNRC18O15417 2968 aaPredicted RBP4.99□□□□□ -1.61
SCARNA4.1-201ENST00000628597 TMEM265A0A087WTH1 108 aa4.98□□□□□ -1.61
SCARNA4.1-201ENST00000628597 NPM3O75607 178 aaKnown RBP4.98□□□□□ -1.61
SCARNA4.1-201ENST00000628597 MAP2K2P36507 400 aa4.98□□□□□ -1.61
SCARNA4.1-201ENST00000628597 COL23A1Q86Y22 540 aaPredicted RBP4.98□□□□□ -1.61
SCARNA4.1-201ENST00000628597 MARCH10Q8NA82 808 aaPredicted RBP4.98□□□□□ -1.61
SCARNA4.1-201ENST00000628597 CAPNS2Q96L46 248 aa4.98□□□□□ -1.61
SCARNA4.1-201ENST00000628597 LRRC4BQ9NT99 713 aa4.98□□□□□ -1.61
SCARNA4.1-201ENST00000628597 ZC3H4Q9UPT8 1303 aaKnown RBP4.97□□□□□ -1.61
SCARNA4.1-201ENST00000628597 A0A0C4DFX4 3053 aa4.97□□□□□ -1.61
SCARNA4.1-201ENST00000628597 TRIOBPQ9H2D6 2365 aa4.97□□□□□ -1.61
SCARNA4.1-201ENST00000628597 CCDC141Q6ZP82 1450 aa4.97□□□□□ -1.61
SCARNA4.1-201ENST00000628597 TGFB2P61812 414 aa4.97□□□□□ -1.61
SCARNA4.1-201ENST00000628597 HFM1A2PYH4 1435 aa4.97□□□□□ -1.61
SCARNA4.1-201ENST00000628597 SSH2Q76I76 1423 aa4.97□□□□□ -1.61
SCARNA4.1-201ENST00000628597 PASKQ96RG2 1323 aa4.97□□□□□ -1.61
SCARNA4.1-201ENST00000628597 COL14A1Q05707 1796 aaKnown RBP4.96□□□□□ -1.61
SCARNA4.1-201ENST00000628597 TOPAZ1Q8N9V7 1692 aa4.96□□□□□ -1.61
SCARNA4.1-201ENST00000628597 ANKRD30BQ9BXX2 1392 aa4.96□□□□□ -1.62
SCARNA4.1-201ENST00000628597 ZC3H6P61129 1189 aaKnown RBP4.96□□□□□ -1.62
SCARNA4.1-201ENST00000628597 FLAD1Q8NFF5 587 aa4.96□□□□□ -1.62
SCARNA4.1-201ENST00000628597 ACSBG1Q96GR2 724 aa4.96□□□□□ -1.62
SCARNA4.1-201ENST00000628597 CDCA7Q9BWT1 371 aaPredicted RBP4.96□□□□□ -1.62
SCARNA4.1-201ENST00000628597 NRAPQ86VF7 1730 aa4.96□□□□□ -1.62
SCARNA4.1-201ENST00000628597 CDC42BPAQ5VT25 1732 aa4.95□□□□□ -1.62
SCARNA4.1-201ENST00000628597 KIAA0232Q92628 1395 aa4.95□□□□□ -1.62
SCARNA4.1-201ENST00000628597 A0A0G2JLW4 131 aa4.95□□□□□ -1.62
SCARNA4.1-201ENST00000628597 EXOC5O00471 708 aa4.95□□□□□ -1.62
SCARNA4.1-201ENST00000628597 HMGB2P26583 209 aaKnown RBP4.95□□□□□ -1.62
SCARNA4.1-201ENST00000628597 MAP3K12Q12852 859 aa4.95□□□□□ -1.62
SCARNA4.1-201ENST00000628597 ZNF326Q5BKZ1 582 aaKnown RBP4.95□□□□□ -1.62
SCARNA4.1-201ENST00000628597 CTU1Q7Z7A3 348 aaKnown RBP4.95□□□□□ -1.62
SCARNA4.1-201ENST00000628597 HPS5Q9UPZ3 1129 aa4.95□□□□□ -1.62
SCARNA4.1-201ENST00000628597 CLEC11AQ9Y240 323 aa4.95□□□□□ -1.62
SCARNA4.1-201ENST00000628597 ADAMTS7Q9UKP4 1686 aa4.95□□□□□ -1.62
SCARNA4.1-201ENST00000628597 MINK1Q8N4C8 1332 aaPredicted RBP4.95□□□□□ -1.62
SCARNA4.1-201ENST00000628597 PRR36Q9H6K5 1346 aa4.95□□□□□ -1.62
SCARNA4.1-201ENST00000628597 ATP7BP35670 1465 aa4.94□□□□□ -1.62
SCARNA4.1-201ENST00000628597 ROBO2Q9HCK4 1378 aa4.94□□□□□ -1.62
SCARNA4.1-201ENST00000628597 DUOX2Q9NRD8 1548 aa4.94□□□□□ -1.62
SCARNA4.1-201ENST00000628597 PAK3O75914 559 aaPredicted RBP4.94□□□□□ -1.62
SCARNA4.1-201ENST00000628597 CYP4F22Q6NT55 531 aa4.94□□□□□ -1.62
SCARNA4.1-201ENST00000628597 CHRDL2Q6WN34 429 aa4.94□□□□□ -1.62
SCARNA4.1-201ENST00000628597 LDHDQ86WU2 507 aa4.94□□□□□ -1.62
SCARNA4.1-201ENST00000628597 POTEDQ86YR6 584 aa4.94□□□□□ -1.62
SCARNA4.1-201ENST00000628597 SYMPKQ92797 1274 aaKnown RBP4.94□□□□□ -1.62
SCARNA4.1-201ENST00000628597 P2RX7Q99572 595 aaKnown RBP4.94□□□□□ -1.62
SCARNA4.1-201ENST00000628597 STXBP5LQ9Y2K9 1186 aa4.94□□□□□ -1.62
SCARNA4.1-201ENST00000628597 BCL9O00512 1426 aa4.94□□□□□ -1.62
SCARNA4.1-201ENST00000628597 CEP152O94986 1710 aa4.94□□□□□ -1.62
SCARNA4.1-201ENST00000628597 SYNGAP1Q96PV0 1343 aa4.94□□□□□ -1.62
SCARNA4.1-201ENST00000628597 USP6P35125 1406 aa4.93□□□□□ -1.62
SCARNA4.1-201ENST00000628597 PKN2Q16513 984 aaKnown RBP4.93□□□□□ -1.62
SCARNA4.1-201ENST00000628597 ALYREFQ86V81 257 aaKnown RBP4.93□□□□□ -1.62
SCARNA4.1-201ENST00000628597 NALCNQ8IZF0 1738 aa4.93□□□□□ -1.62
SCARNA4.1-201ENST00000628597 XRN1Q8IZH2 1706 aaKnown RBP4.93□□□□□ -1.62
SCARNA4.1-201ENST00000628597 CSRNP3Q8WYN3 585 aa4.93□□□□□ -1.62
SCARNA4.1-201ENST00000628597 LMTK2Q8IWU2 1503 aa4.92□□□□□ -1.62
SCARNA4.1-201ENST00000628597 GPRASP1Q5JY77 1395 aa4.92□□□□□ -1.62
SCARNA4.1-201ENST00000628597 POTECB2RU33 542 aa4.92□□□□□ -1.62
SCARNA4.1-201ENST00000628597 AOC2O75106 756 aa4.92□□□□□ -1.62
SCARNA4.1-201ENST00000628597 POTEIP0CG38 1075 aa4.92□□□□□ -1.62
SCARNA4.1-201ENST00000628597 POTEJP0CG39 1038 aa4.92□□□□□ -1.62
SCARNA4.1-201ENST00000628597 BRPF1P55201 1214 aaPredicted RBP4.92□□□□□ -1.62
SCARNA4.1-201ENST00000628597 DALRD3Q5D0E6 543 aaKnown RBP4.92□□□□□ -1.62
SCARNA4.1-201ENST00000628597 TOM1L2Q6ZVM7 507 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms