RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 PHACTR3Q96KR7 559 aa24.13■■□□□ 1.45
PTBP1-220ENST00000627714 CHD1LQ86WJ1 897 aa24.12■■□□□ 1.45
PTBP1-220ENST00000627714 HMOX1P09601 288 aa24.11■■□□□ 1.45
PTBP1-220ENST00000627714 ZBTB7BO15156 539 aaPredicted RBP24.11■■□□□ 1.45
PTBP1-220ENST00000627714 CYB5RLQ6IPT4 315 aa24.11■■□□□ 1.45
PTBP1-220ENST00000627714 EMILIN1Q9Y6C2 1016 aa24.11■■□□□ 1.45
PTBP1-220ENST00000627714 AKAP12Q02952 1782 aa24.1■■□□□ 1.45
PTBP1-220ENST00000627714 COG3Q96JB2 828 aa24.1■■□□□ 1.45
PTBP1-220ENST00000627714 BRPF3Q9ULD4 1205 aa24.1■■□□□ 1.45
PTBP1-220ENST00000627714 CPS1P31327 1500 aa24.1■■□□□ 1.45
PTBP1-220ENST00000627714 ITSN1Q15811 1721 aa24.09■■□□□ 1.45
PTBP1-220ENST00000627714 ABCC4O15439 1325 aa24.09■■□□□ 1.45
PTBP1-220ENST00000627714 RBM25P49756 843 aaKnown RBP24.09■■□□□ 1.45
PTBP1-220ENST00000627714 HDGFP51858 240 aaKnown RBP24.09■■□□□ 1.45
PTBP1-220ENST00000627714 BMP2KLQ5H9B9 411 aa24.09■■□□□ 1.45
PTBP1-220ENST00000627714 TSPOAP1O95153 1857 aa24.09■■□□□ 1.45
PTBP1-220ENST00000627714 C3P01024 1663 aa24.09■■□□□ 1.45
PTBP1-220ENST00000627714 NME9Q86XW9 330 aa24.08■■□□□ 1.45
PTBP1-220ENST00000627714 CFAP44Q96MT7 982 aa24.08■■□□□ 1.45
PTBP1-220ENST00000627714 CCDC61Q9Y6R9 512 aa24.08■■□□□ 1.45
PTBP1-220ENST00000627714 FBLN1P23142 703 aa24.08■■□□□ 1.45
PTBP1-220ENST00000627714 CHMP5Q9NZZ3 219 aa24.08■■□□□ 1.45
PTBP1-220ENST00000627714 METP08581 1390 aa24.08■■□□□ 1.44
PTBP1-220ENST00000627714 HSCBQ8IWL3 235 aa24.07■■□□□ 1.44
PTBP1-220ENST00000627714 NUDT16Q96DE0 195 aaKnown RBP24.07■■□□□ 1.44
PTBP1-220ENST00000627714 MBIPQ9NS73 344 aa24.07■■□□□ 1.44
PTBP1-220ENST00000627714 KIF24Q5T7B8 1368 aa24.07■■□□□ 1.44
PTBP1-220ENST00000627714 DLG5Q8TDM6 1919 aa24.07■■□□□ 1.44
PTBP1-220ENST00000627714 ZNF692Q9BU19 519 aaPredicted RBP24.07■■□□□ 1.44
PTBP1-220ENST00000627714 LNPKQ9C0E8 428 aa24.07■■□□□ 1.44
PTBP1-220ENST00000627714 API5Q9BZZ5 524 aaKnown RBP24.06■■□□□ 1.44
PTBP1-220ENST00000627714 NRKQ7Z2Y5 1582 aa24.06■■□□□ 1.44
PTBP1-220ENST00000627714 TWISTNBQ3B726 338 aaPredicted RBP24.05■■□□□ 1.44
PTBP1-220ENST00000627714 THUMPD2Q9BTF0 503 aaKnown RBP24.04■■□□□ 1.44
PTBP1-220ENST00000627714 TSPYL6Q8N831 410 aa24.04■■□□□ 1.44
PTBP1-220ENST00000627714 HAP1P54257 671 aaPredicted RBP24.03■■□□□ 1.44
PTBP1-220ENST00000627714 L1TD1Q5T7N2 865 aaKnown RBP24.03■■□□□ 1.44
PTBP1-220ENST00000627714 SNX21Q969T3 373 aa24.03■■□□□ 1.44
PTBP1-220ENST00000627714 NCOA3Q9Y6Q9 1424 aa24.02■■□□□ 1.44
PTBP1-220ENST00000627714 TXNDC2Q86VQ3 553 aa24.02■■□□□ 1.44
PTBP1-220ENST00000627714 EIF5BO60841 1220 aaKnown RBP24.01■■□□□ 1.43
PTBP1-220ENST00000627714 MCM4P33991 863 aa24.01■■□□□ 1.43
PTBP1-220ENST00000627714 ANKRD45Q5TZF3 282 aa24.01■■□□□ 1.43
PTBP1-220ENST00000627714 ESF1Q9H501 851 aaKnown RBP23.99■■□□□ 1.43
PTBP1-220ENST00000627714 RTN4Q9NQC3 1192 aaKnown RBP23.99■■□□□ 1.43
PTBP1-220ENST00000627714 ZRANB1Q9UGI0 708 aa23.99■■□□□ 1.43
PTBP1-220ENST00000627714 MLECQ14165 292 aa23.97■■□□□ 1.43
PTBP1-220ENST00000627714 C8orf58Q8NAV2 365 aa23.97■■□□□ 1.43
PTBP1-220ENST00000627714 RRS1Q15050 365 aaKnown RBP23.96■■□□□ 1.43
PTBP1-220ENST00000627714 SPRYD3Q8NCJ5 442 aa23.95■■□□□ 1.42
PTBP1-220ENST00000627714 ELL2O00472 640 aaPredicted RBP23.95■■□□□ 1.42
PTBP1-220ENST00000627714 SIRT2Q8IXJ6 389 aa23.95■■□□□ 1.42
PTBP1-220ENST00000627714 CIZ1Q9ULV3 898 aaPredicted RBP23.95■■□□□ 1.42
PTBP1-220ENST00000627714 TOPAZ1Q8N9V7 1692 aa23.94■■□□□ 1.42
PTBP1-220ENST00000627714 C1orf115Q9H7X2 142 aa23.94■■□□□ 1.42
PTBP1-220ENST00000627714 TNRQ92752 1358 aa23.94■■□□□ 1.42
PTBP1-220ENST00000627714 DDX11L8A8MPP1 907 aa23.93■■□□□ 1.42
PTBP1-220ENST00000627714 DDIT3P35638 169 aa23.93■■□□□ 1.42
PTBP1-220ENST00000627714 TMEM2Q9UHN6 1383 aa23.93■■□□□ 1.42
PTBP1-220ENST00000627714 PRR36Q9H6K5 1346 aa23.93■■□□□ 1.42
PTBP1-220ENST00000627714 UBR1Q8IWV7 1749 aa23.92■■□□□ 1.42
PTBP1-220ENST00000627714 INTS3Q68E01 1043 aaKnown RBP23.92■■□□□ 1.42
PTBP1-220ENST00000627714 KIAA0232Q92628 1395 aa23.92■■□□□ 1.42
PTBP1-220ENST00000627714 OVOS2A0A0J9YW53 1432 aa23.91■■□□□ 1.42
PTBP1-220ENST00000627714 OVOS2Q6IE36 1432 aa23.91■■□□□ 1.42
PTBP1-220ENST00000627714 NALCNQ8IZF0 1738 aa23.91■■□□□ 1.42
PTBP1-220ENST00000627714 NCKAP5LQ9HCH0 1330 aa23.91■■□□□ 1.42
PTBP1-220ENST00000627714 FAM83GA6ND36 823 aa23.91■■□□□ 1.42
PTBP1-220ENST00000627714 EIF4A2Q14240 407 aaKnown RBP23.9■■□□□ 1.42
PTBP1-220ENST00000627714 FAM43AQ8N2R8 423 aa23.9■■□□□ 1.42
PTBP1-220ENST00000627714 TTC21BQ7Z4L5 1316 aa23.9■■□□□ 1.42
PTBP1-220ENST00000627714 TBC1D9Q6ZT07 1266 aa23.9■■□□□ 1.42
PTBP1-220ENST00000627714 CDC45O75419 566 aa23.89■■□□□ 1.41
PTBP1-220ENST00000627714 ROBO2Q9HCK4 1378 aa23.88■■□□□ 1.41
PTBP1-220ENST00000627714 PLEKHG3A1L390 1219 aa23.88■■□□□ 1.41
PTBP1-220ENST00000627714 DCTPP1Q9H773 170 aa23.88■■□□□ 1.41
PTBP1-220ENST00000627714 RGPD1P0DJD0 1748 aa23.88■■□□□ 1.41
PTBP1-220ENST00000627714 CHL1O00533 1208 aa23.88■■□□□ 1.41
PTBP1-220ENST00000627714 HSP90AB1P08238 724 aaKnown RBP23.88■■□□□ 1.41
PTBP1-220ENST00000627714 SULT6B1Q6IMI4 303 aa23.87■■□□□ 1.41
PTBP1-220ENST00000627714 ADAMTS13Q76LX8 1427 aa23.87■■□□□ 1.41
PTBP1-220ENST00000627714 PTPRCP08575 1304 aa23.87■■□□□ 1.41
PTBP1-220ENST00000627714 GOLGA6L3A6NEY3 463 aa23.87■■□□□ 1.41
PTBP1-220ENST00000627714 USP6P35125 1406 aa23.86■■□□□ 1.41
PTBP1-220ENST00000627714 FSD2A1L4K1 749 aa23.86■■□□□ 1.41
PTBP1-220ENST00000627714 TRAK2O60296 914 aa23.86■■□□□ 1.41
PTBP1-220ENST00000627714 DCTN1Q14203 1278 aa23.86■■□□□ 1.41
PTBP1-220ENST00000627714 KIF2CQ99661 725 aa23.86■■□□□ 1.41
PTBP1-220ENST00000627714 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.86■■□□□ 1.41
PTBP1-220ENST00000627714 USP31Q70CQ4 1352 aa23.86■■□□□ 1.41
PTBP1-220ENST00000627714 RPAP2Q8IXW5 612 aaPredicted RBP23.86■■□□□ 1.41
PTBP1-220ENST00000627714 PTMSP20962 102 aa23.85■■□□□ 1.41
PTBP1-220ENST00000627714 PLEKHG1Q9ULL1 1385 aa23.85■■□□□ 1.41
PTBP1-220ENST00000627714 RGS12O14924 1447 aa23.85■■□□□ 1.41
PTBP1-220ENST00000627714 ANKRD44Q8N8A2 993 aa23.84■■□□□ 1.41
PTBP1-220ENST00000627714 ACEP12821 1306 aa23.84■■□□□ 1.41
PTBP1-220ENST00000627714 AEBP1Q8IUX7 1158 aa23.83■■□□□ 1.41
PTBP1-220ENST00000627714 ISY1Q9ULR0 285 aaKnown RBP23.83■■□□□ 1.41
PTBP1-220ENST00000627714 ATP10DQ9P241 1426 aa23.83■■□□□ 1.41
PTBP1-220ENST00000627714 GBP4Q96PP9 640 aa23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms