RNA–Protein interactions for RNA: ENST00000624145.3

ANKRD28-215, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2 BASIC

Gene ANKRD28, Length 6,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-215ENST00000624145 LNPKQ9C0E8 428 aa4.76□□□□□ -1.65
ANKRD28-215ENST00000624145 TNMDQ9H2S6 317 aa4.76□□□□□ -1.65
ANKRD28-215ENST00000624145 NLRP2Q9NX02 1062 aa4.76□□□□□ -1.65
ANKRD28-215ENST00000624145 MINK1Q8N4C8 1332 aaPredicted RBP4.76□□□□□ -1.65
ANKRD28-215ENST00000624145 ZWINTO95229 277 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 BMS1Q14692 1282 aaKnown RBP4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 ANKRD1Q15327 319 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 TICAM2Q86XR7 235 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 PUS7Q96PZ0 661 aaKnown RBP4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 SSX2IPQ9Y2D8 614 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 FIBPO43427 364 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 CDKL5O76039 1030 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 ME1P48163 572 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 CCDC150Q8NCX0 1101 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 DRC1Q96MC2 740 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 AAMPQ13685 434 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 UBE4AQ14139 1066 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 CEP57L1Q8IYX8 460 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 TSNARE1Q96NA8 513 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 ZSCAN25Q6NSZ9 544 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 ZSCAN29Q8IWY8 852 aaPredicted RBP4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 NUP133Q8WUM0 1156 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 PKNOX2Q96KN3 472 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 CCDC144AA2RUR9 1427 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 GNAI3P08754 354 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 IFFO1Q0D2I5 559 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 IMMTQ16891 758 aaKnown RBP4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 RSPH4AQ5TD94 716 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 TMCO3Q6UWJ1 677 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 CARMIL1Q5VZK9 1371 aa4.75□□□□□ -1.65
ANKRD28-215ENST00000624145 NFKBIBQ15653 356 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 ARHGAP29Q52LW3 1261 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 C6orf163Q5TEZ5 329 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 LARP1Q6PKG0 1096 aaKnown RBP4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 MAP9Q49MG5 647 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 MICALCLQ6ZW33 695 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 VPS36Q86VN1 386 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 PSMD1Q99460 953 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 RBM42Q9BTD8 480 aaKnown RBP4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 APAF1O14727 1248 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 PRPF40AO75400 957 aaKnown RBP4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 MCM3P25205 808 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 SPA17Q15506 151 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 GOPCQ9HD26 462 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 TMOD2Q9NZR1 351 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 SMTNL1A8MU46 457 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 SURF6O75683 361 aaKnown RBP4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 CCDC30Q5VVM6 783 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 RUNDC1Q96C34 613 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 CYP46A1Q9Y6A2 500 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 CTNNA2P26232 953 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 NEK4P51957 841 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 RBM10P98175 930 aaKnown RBP4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 RAB3IL1Q8TBN0 382 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 CTNNBL1Q8WYA6 563 aaPredicted RBP4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 FERMT2Q96AC1 680 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 DDX11Q96FC9 970 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 TSG101Q99816 390 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 FERMT1Q9BQL6 677 aa4.74□□□□□ -1.65
ANKRD28-215ENST00000624145 MIA2Q96PC5 1412 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 MRPS9P82933 396 aaKnown RBP4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 CCDC178Q5BJE1 867 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 LUZP1Q86V48 1076 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 WASF1Q92558 559 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 CEP131Q9UPN4 1083 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 TRAK2O60296 914 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 HNRNPMP52272 730 aaKnown RBP eCLIP4.73□□□□□ -1.652e-7■■■□□ 18.1
ANKRD28-215ENST00000624145 KRT85P78386 507 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 UBAC1Q9BSL1 405 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 TAOK3Q9H2K8 898 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 CUX2O14529 1486 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 SMG6Q86US8 1419 aaKnown RBP4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 ERICH4A6NGS2 130 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 CHMP4BP1P59074 171 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 FKBP15Q5T1M5 1219 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 WDR70Q9NW82 654 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 STK3Q13188 491 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 SREK1Q8WXA9 508 aaKnown RBP4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 LRRC45Q96CN5 670 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 MACROD2A1Z1Q3 448 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 USP5P45974 858 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 DAAM2Q86T65 1068 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 L3MBTL2Q969R5 705 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 UPF3BQ9BZI7 483 aaKnown RBP4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 V9GYY5 206 aaPredicted RBP4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 RAB3GAP2Q9H2M9 1393 aa4.73□□□□□ -1.65
ANKRD28-215ENST00000624145 WDR33Q9C0J8 1336 aaKnown RBP4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 ZNF526Q8TF50 670 aaPredicted RBP4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 UBXN4Q92575 508 aa4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 TIGD1Q96MW7 591 aa4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 FAM107BQ9H098 131 aa4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 TDO2P48775 406 aa4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 RNF187Q5TA31 235 aaPredicted RBP4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 FSD2A1L4K1 749 aa4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 SPECC1LQ69YQ0 1117 aa4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 CACNA2D4Q7Z3S7 1137 aa4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 SEC63Q9UGP8 760 aaKnown RBP4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 ZBED9Q6R2W3 1325 aa4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 PDCL2Q8N4E4 241 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms