RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 FAM117AQ9C073 453 aa10.79□□□□□ -0.68
AC004943.3-201ENST00000624116 C6orf118Q5T5N4 469 aa10.78□□□□□ -0.68
AC004943.3-201ENST00000624116 TSEN34Q9BSV6 310 aaKnown RBP10.78□□□□□ -0.68
AC004943.3-201ENST00000624116 PGPEP1Q9NXJ5 209 aa10.78□□□□□ -0.68
AC004943.3-201ENST00000624116 GPSM3Q9Y4H4 160 aa10.78□□□□□ -0.68
AC004943.3-201ENST00000624116 ZBTB33Q86T24 672 aa10.77□□□□□ -0.69
AC004943.3-201ENST00000624116 LRRN4Q8WUT4 740 aa10.77□□□□□ -0.69
AC004943.3-201ENST00000624116 PTK2Q05397 1052 aa10.76□□□□□ -0.69
AC004943.3-201ENST00000624116 DHX9Q08211 1270 aaKnown RBP10.76□□□□□ -0.69
AC004943.3-201ENST00000624116 AP1G2O75843 785 aa10.75□□□□□ -0.69
AC004943.3-201ENST00000624116 GMPRP36959 345 aa10.75□□□□□ -0.69
AC004943.3-201ENST00000624116 PROCA1Q8NCQ7 364 aaPredicted RBP10.75□□□□□ -0.69
AC004943.3-201ENST00000624116 VEGFBP49765 207 aa10.74□□□□□ -0.69
AC004943.3-201ENST00000624116 NR6A1Q15406 480 aa10.74□□□□□ -0.69
AC004943.3-201ENST00000624116 KCTD15Q96SI1 283 aaPredicted RBP10.73□□□□□ -0.69
AC004943.3-201ENST00000624116 NBPF20Q3BBV1 942 aa10.72□□□□□ -0.69
AC004943.3-201ENST00000624116 PPP1R26Q5T8A7 1209 aaPredicted RBP10.72□□□□□ -0.69
AC004943.3-201ENST00000624116 SOBPA7XYQ1 873 aa10.71□□□□□ -0.69
AC004943.3-201ENST00000624116 SLC24A1O60721 1099 aa10.71□□□□□ -0.69
AC004943.3-201ENST00000624116 VSIG8P0DPA2 414 aa10.71□□□□□ -0.69
AC004943.3-201ENST00000624116 SOS2Q07890 1332 aaPredicted RBP10.71□□□□□ -0.69
AC004943.3-201ENST00000624116 GOPCQ9HD26 462 aa10.71□□□□□ -0.69
AC004943.3-201ENST00000624116 ZSCAN1Q8NBB4 408 aa10.7□□□□□ -0.7
AC004943.3-201ENST00000624116 ERBB4Q15303 1308 aa10.69□□□□□ -0.7
AC004943.3-201ENST00000624116 USP17L8P0C7I0 530 aa10.69□□□□□ -0.7
AC004943.3-201ENST00000624116 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.69□□□□□ -0.7
AC004943.3-201ENST00000624116 Q6ZVU0 165 aa10.69□□□□□ -0.7
AC004943.3-201ENST00000624116 TRIM52Q96A61 297 aa10.69□□□□□ -0.7
AC004943.3-201ENST00000624116 FBXO31Q5XUX0 539 aaPredicted RBP10.68□□□□□ -0.7
AC004943.3-201ENST00000624116 TTLL8A6PVC2 850 aa10.67□□□□□ -0.7
AC004943.3-201ENST00000624116 RFC5P40937 340 aa10.67□□□□□ -0.7
AC004943.3-201ENST00000624116 ADAM32Q8TC27 787 aa10.67□□□□□ -0.7
AC004943.3-201ENST00000624116 PCMTD1Q96MG8 357 aaPredicted RBP10.67□□□□□ -0.7
AC004943.3-201ENST00000624116 DNMT3LQ9UJW3 386 aa10.66□□□□□ -0.7
AC004943.3-201ENST00000624116 TMEM259Q4ZIN3 620 aa10.65□□□□□ -0.7
AC004943.3-201ENST00000624116 INTS6LQ5JSJ4 861 aaKnown RBP10.65□□□□□ -0.7
AC004943.3-201ENST00000624116 SPINT1O43278 529 aa10.64□□□□□ -0.71
AC004943.3-201ENST00000624116 PPFIA3O75145 1194 aa10.64□□□□□ -0.71
AC004943.3-201ENST00000624116 CBLBQ13191 982 aa10.63□□□□□ -0.71
AC004943.3-201ENST00000624116 DZIP3Q86Y13 1208 aaKnown RBP10.63□□□□□ -0.71
AC004943.3-201ENST00000624116 OCSTAMPQ9BR26 566 aa10.63□□□□□ -0.71
AC004943.3-201ENST00000624116 HMX1Q9NP08 348 aaPredicted RBP10.62□□□□□ -0.71
AC004943.3-201ENST00000624116 EPS8L1Q8TE68 723 aa10.61□□□□□ -0.71
AC004943.3-201ENST00000624116 NEUROD2Q15784 382 aa10.6□□□□□ -0.71
AC004943.3-201ENST00000624116 PTSQ03393 145 aa10.59□□□□□ -0.71
AC004943.3-201ENST00000624116 SEPT12Q8IYM1 358 aa10.59□□□□□ -0.71
AC004943.3-201ENST00000624116 LORP23490 312 aaPredicted RBP10.58□□□□□ -0.72
AC004943.3-201ENST00000624116 CCDC125Q86Z20 511 aa10.57□□□□□ -0.72
AC004943.3-201ENST00000624116 ZNF592Q92610 1267 aa10.57□□□□□ -0.72
AC004943.3-201ENST00000624116 FIGNL2A6NMB9 653 aa10.56□□□□□ -0.72
AC004943.3-201ENST00000624116 RELBQ01201 579 aa10.56□□□□□ -0.72
AC004943.3-201ENST00000624116 ZNF784Q8NCA9 323 aaPredicted RBP10.56□□□□□ -0.72
AC004943.3-201ENST00000624116 POLMQ9NP87 494 aaPredicted RBP10.56□□□□□ -0.72
AC004943.3-201ENST00000624116 ESPNB1AK53 854 aa10.55□□□□□ -0.72
AC004943.3-201ENST00000624116 RAB15P59190 212 aa10.55□□□□□ -0.72
AC004943.3-201ENST00000624116 ZBBXA8MT70 800 aa10.54□□□□□ -0.72
AC004943.3-201ENST00000624116 ERVH48-1M5A8F1 160 aa10.54□□□□□ -0.72
AC004943.3-201ENST00000624116 ADH1AP07327 375 aa10.54□□□□□ -0.72
AC004943.3-201ENST00000624116 CCDC155Q8N6L0 562 aa10.54□□□□□ -0.72
AC004943.3-201ENST00000624116 AGBL1Q96MI9 1066 aa10.54□□□□□ -0.72
AC004943.3-201ENST00000624116 TRIM34Q9BYJ4 488 aa10.54□□□□□ -0.72
AC004943.3-201ENST00000624116 CTSOP43234 321 aaPredicted RBP10.53□□□□□ -0.72
AC004943.3-201ENST00000624116 NANOS1Q8WY41 292 aaKnown RBP10.53□□□□□ -0.72
AC004943.3-201ENST00000624116 INSM2Q96T92 566 aaPredicted RBP10.53□□□□□ -0.72
AC004943.3-201ENST00000624116 TMPRSS4Q9NRS4 437 aa10.53□□□□□ -0.72
AC004943.3-201ENST00000624116 IL27Q8NEV9 243 aa10.52□□□□□ -0.73
AC004943.3-201ENST00000624116 SLC35F4A4IF30 521 aa10.51□□□□□ -0.73
AC004943.3-201ENST00000624116 APBB1O00213 710 aa10.51□□□□□ -0.73
AC004943.3-201ENST00000624116 SOCS7O14512 581 aa10.51□□□□□ -0.73
AC004943.3-201ENST00000624116 MCCD1P59942 119 aaPredicted RBP10.51□□□□□ -0.73
AC004943.3-201ENST00000624116 RNF217Q8TC41 542 aa10.51□□□□□ -0.73
AC004943.3-201ENST00000624116 ZNF395Q9H8N7 513 aaPredicted RBP10.51□□□□□ -0.73
AC004943.3-201ENST00000624116 ZNF330Q9Y3S2 320 aaPredicted RBP10.51□□□□□ -0.73
AC004943.3-201ENST00000624116 LILRA1O75019 489 aa10.5□□□□□ -0.73
AC004943.3-201ENST00000624116 PCDHB9Q9Y5E1 797 aa10.5□□□□□ -0.73
AC004943.3-201ENST00000624116 ITGA6P23229 1130 aa10.49□□□□□ -0.73
AC004943.3-201ENST00000624116 PTGIRP43119 386 aa10.49□□□□□ -0.73
AC004943.3-201ENST00000624116 RNF20Q5VTR2 975 aa10.49□□□□□ -0.73
AC004943.3-201ENST00000624116 BANK1Q8NDB2 785 aa10.49□□□□□ -0.73
AC004943.3-201ENST00000624116 GJD4Q96KN9 370 aaPredicted RBP10.48□□□□□ -0.73
AC004943.3-201ENST00000624116 FBXO45P0C2W1 286 aa10.46□□□□□ -0.73
AC004943.3-201ENST00000624116 SV2AQ7L0J3 742 aa10.46□□□□□ -0.73
AC004943.3-201ENST00000624116 CYLDQ9NQC7 956 aa10.46□□□□□ -0.73
AC004943.3-201ENST00000624116 ADD1P35611 737 aaKnown RBP10.45□□□□□ -0.74
AC004943.3-201ENST00000624116 BRPF1P55201 1214 aaPredicted RBP10.45□□□□□ -0.74
AC004943.3-201ENST00000624116 LYSMD3Q7Z3D4 306 aa10.45□□□□□ -0.74
AC004943.3-201ENST00000624116 CNTNAP3BQ96NU0 1288 aa10.45□□□□□ -0.74
AC004943.3-201ENST00000624116 COL25A1Q9BXS0 654 aaPredicted RBP10.45□□□□□ -0.74
AC004943.3-201ENST00000624116 CNTNAP3Q9BZ76 1288 aa10.45□□□□□ -0.74
AC004943.3-201ENST00000624116 CDC14CA4D256 554 aa10.44□□□□□ -0.74
AC004943.3-201ENST00000624116 ATP5J2-PTCD1G3V325 749 aa10.44□□□□□ -0.74
AC004943.3-201ENST00000624116 NR1H3Q13133 447 aa10.44□□□□□ -0.74
AC004943.3-201ENST00000624116 FOXD4L5Q5VV16 416 aaPredicted RBP10.44□□□□□ -0.74
AC004943.3-201ENST00000624116 GPR161Q8N6U8 529 aaKnown RBP10.44□□□□□ -0.74
AC004943.3-201ENST00000624116 NDUFB9Q9Y6M9 179 aa10.44□□□□□ -0.74
AC004943.3-201ENST00000624116 GIGYF1O75420 1035 aaPredicted RBP10.43□□□□□ -0.74
AC004943.3-201ENST00000624116 GPC1P35052 558 aa10.43□□□□□ -0.74
AC004943.3-201ENST00000624116 RNF144AP50876 292 aaPredicted RBP10.43□□□□□ -0.74
AC004943.3-201ENST00000624116 KRT76Q01546 638 aa10.42□□□□□ -0.74
AC004943.3-201ENST00000624116 CC2D2BQ6DHV5 1058 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms