RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 MARCH10Q8NA82 808 aaPredicted RBP13.23□□□□□ -0.29
TARDBP-227ENST00000622057 CDCA7Q9BWT1 371 aaPredicted RBP13.23□□□□□ -0.29
TARDBP-227ENST00000622057 CARD10Q9BWT7 1032 aa13.23□□□□□ -0.29
TARDBP-227ENST00000622057 LRP5O75197 1615 aa13.22□□□□□ -0.29
TARDBP-227ENST00000622057 PTF1AQ7RTS3 328 aa13.22□□□□□ -0.29
TARDBP-227ENST00000622057 HDGFL2Q7Z4V5 671 aaPredicted RBP13.22□□□□□ -0.29
TARDBP-227ENST00000622057 SLC12A5Q9H2X9 1139 aa13.22□□□□□ -0.29
TARDBP-227ENST00000622057 OVOS2A0A0G2JMS6 1433 aa13.22□□□□□ -0.29
TARDBP-227ENST00000622057 OVOS2A0A0J9YW53 1432 aa13.22□□□□□ -0.29
TARDBP-227ENST00000622057 CPSF1Q10570 1443 aaKnown RBP13.22□□□□□ -0.29
TARDBP-227ENST00000622057 OVOS2Q6IE36 1432 aa13.22□□□□□ -0.29
TARDBP-227ENST00000622057 PLSCR1O15162 318 aa13.21□□□□□ -0.29
TARDBP-227ENST00000622057 NME9Q86XW9 330 aa13.21□□□□□ -0.29
TARDBP-227ENST00000622057 BCL11BQ9C0K0 894 aaPredicted RBP13.21□□□□□ -0.29
TARDBP-227ENST00000622057 TONSLQ96HA7 1378 aa13.2□□□□□ -0.3
TARDBP-227ENST00000622057 PIK3C2AO00443 1686 aa13.2□□□□□ -0.3
TARDBP-227ENST00000622057 SPON1Q9HCB6 807 aa13.19□□□□□ -0.3
TARDBP-227ENST00000622057 NLRP2Q9NX02 1062 aa13.19□□□□□ -0.3
TARDBP-227ENST00000622057 PPP1R1BQ9UD71 204 aaPredicted RBP13.19□□□□□ -0.3
TARDBP-227ENST00000622057 KCNQ2O43526 872 aa13.18□□□□□ -0.3
TARDBP-227ENST00000622057 PARP4Q9UKK3 1724 aaKnown RBP13.18□□□□□ -0.3
TARDBP-227ENST00000622057 COL18A1P39060 1754 aa13.17□□□□□ -0.3
TARDBP-227ENST00000622057 PROM2Q8N271 834 aa13.17□□□□□ -0.3
TARDBP-227ENST00000622057 TERF2IPQ9NYB0 399 aa13.17□□□□□ -0.3
TARDBP-227ENST00000622057 USP31Q70CQ4 1352 aa13.17□□□□□ -0.3
TARDBP-227ENST00000622057 CCDC7Q96M83 1385 aa13.17□□□□□ -0.3
TARDBP-227ENST00000622057 SBNO2Q9Y2G9 1366 aa13.17□□□□□ -0.3
TARDBP-227ENST00000622057 ANKRD24Q8TF21 1146 aa13.16□□□□□ -0.3
TARDBP-227ENST00000622057 ACSBG1Q96GR2 724 aa13.16□□□□□ -0.3
TARDBP-227ENST00000622057 ANO8Q9HCE9 1232 aaPredicted RBP13.16□□□□□ -0.3
TARDBP-227ENST00000622057 ST20-MTHFSA0A0A6YYL1 179 aa13.15□□□□□ -0.3
TARDBP-227ENST00000622057 IL2RBP14784 551 aa13.15□□□□□ -0.3
TARDBP-227ENST00000622057 TXNRD1Q16881 649 aa13.15□□□□□ -0.3
TARDBP-227ENST00000622057 AKAP12Q02952 1782 aa13.15□□□□□ -0.31
TARDBP-227ENST00000622057 ERBB3P21860 1342 aa13.14□□□□□ -0.31
TARDBP-227ENST00000622057 LRRC37A3O60309 1634 aa13.14□□□□□ -0.31
TARDBP-227ENST00000622057 LTV1Q96GA3 475 aaPredicted RBP13.14□□□□□ -0.31
TARDBP-227ENST00000622057 PUS7Q96PZ0 661 aaKnown RBP13.14□□□□□ -0.31
TARDBP-227ENST00000622057 CD163L1Q9NR16 1453 aa13.14□□□□□ -0.31
TARDBP-227ENST00000622057 RREB1Q92766 1687 aa13.14□□□□□ -0.31
TARDBP-227ENST00000622057 NFAT5O94916 1531 aa13.13□□□□□ -0.31
TARDBP-227ENST00000622057 PDGFDQ9GZP0 370 aaPredicted RBP13.13□□□□□ -0.31
TARDBP-227ENST00000622057 STK32BQ9NY57 414 aa13.13□□□□□ -0.31
TARDBP-227ENST00000622057 NUP188Q5SRE5 1749 aa13.13□□□□□ -0.31
TARDBP-227ENST00000622057 PEAK1Q9H792 1746 aa13.13□□□□□ -0.31
TARDBP-227ENST00000622057 RGPD5Q99666 1765 aa13.12□□□□□ -0.31
TARDBP-227ENST00000622057 A0A1W2PP64 1363 aa13.12□□□□□ -0.31
TARDBP-227ENST00000622057 ZBTB7AO95365 584 aa13.12□□□□□ -0.31
TARDBP-227ENST00000622057 BCL9O00512 1426 aa13.12□□□□□ -0.31
TARDBP-227ENST00000622057 EDC4Q6P2E9 1401 aaKnown RBP13.12□□□□□ -0.31
TARDBP-227ENST00000622057 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
TARDBP-227ENST00000622057 FBLN1P23142 703 aa13.11□□□□□ -0.31
TARDBP-227ENST00000622057 SLC15A2Q16348 729 aa13.11□□□□□ -0.31
TARDBP-227ENST00000622057 IP6K1Q92551 441 aa13.11□□□□□ -0.31
TARDBP-227ENST00000622057 COG3Q96JB2 828 aa13.11□□□□□ -0.31
TARDBP-227ENST00000622057 TESK2Q96S53 571 aa13.11□□□□□ -0.31
TARDBP-227ENST00000622057 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
TARDBP-227ENST00000622057 SLC24A1O60721 1099 aa13.1□□□□□ -0.31
TARDBP-227ENST00000622057 DDX54Q8TDD1 881 aaKnown RBP13.1□□□□□ -0.31
TARDBP-227ENST00000622057 AMPHP49418 695 aa13.09□□□□□ -0.31
TARDBP-227ENST00000622057 TNS2Q63HR2 1409 aa13.09□□□□□ -0.31
TARDBP-227ENST00000622057 MON2Q7Z3U7 1717 aa13.08□□□□□ -0.32
TARDBP-227ENST00000622057 YY1P25490 414 aa13.08□□□□□ -0.32
TARDBP-227ENST00000622057 SBF2Q86WG5 1849 aa13.08□□□□□ -0.32
TARDBP-227ENST00000622057 TRIM26Q12899 539 aaPredicted RBP13.07□□□□□ -0.32
TARDBP-227ENST00000622057 HOXC9P31274 260 aa13.06□□□□□ -0.32
TARDBP-227ENST00000622057 TMF1P82094 1093 aa13.06□□□□□ -0.32
TARDBP-227ENST00000622057 SYTL4Q96C24 671 aaPredicted RBP13.06□□□□□ -0.32
TARDBP-227ENST00000622057 ABCC6O95255 1503 aa13.06□□□□□ -0.32
TARDBP-227ENST00000622057 MAP3K19Q56UN5 1328 aa13.06□□□□□ -0.32
TARDBP-227ENST00000622057 WNK3Q9BYP7 1800 aa13.05□□□□□ -0.32
TARDBP-227ENST00000622057 PTGER2P43116 358 aa13.05□□□□□ -0.32
TARDBP-227ENST00000622057 GGNBP2Q9H3C7 697 aa13.05□□□□□ -0.32
TARDBP-227ENST00000622057 NINLQ9Y2I6 1382 aa13.05□□□□□ -0.32
TARDBP-227ENST00000622057 FYB1O15117 783 aa13.04□□□□□ -0.32
TARDBP-227ENST00000622057 RRS1Q15050 365 aaKnown RBP13.04□□□□□ -0.32
TARDBP-227ENST00000622057 MTFR1LQ9H019 292 aa13.04□□□□□ -0.32
TARDBP-227ENST00000622057 LRRC4BQ9NT99 713 aa13.04□□□□□ -0.32
TARDBP-227ENST00000622057 RGPD3A6NKT7 1758 aaPredicted RBP13.03□□□□□ -0.32
TARDBP-227ENST00000622057 RGPD4Q7Z3J3 1758 aa13.03□□□□□ -0.32
TARDBP-227ENST00000622057 PRIM1P49642 420 aaKnown RBP13.03□□□□□ -0.32
TARDBP-227ENST00000622057 ZCRB1Q8TBF4 217 aaKnown RBP13.03□□□□□ -0.32
TARDBP-227ENST00000622057 ANKRD36BQ8N2N9 1353 aa13.03□□□□□ -0.32
TARDBP-227ENST00000622057 LTN1O94822 1766 aa13.02□□□□□ -0.32
TARDBP-227ENST00000622057 ZNF827Q17R98 1081 aa13.02□□□□□ -0.33
TARDBP-227ENST00000622057 NBPF6Q5VWK0 638 aa13.02□□□□□ -0.33
TARDBP-227ENST00000622057 NBPF4Q96M43 638 aa13.02□□□□□ -0.33
TARDBP-227ENST00000622057 SYT17Q9BSW7 474 aa13.02□□□□□ -0.33
TARDBP-227ENST00000622057 FHDC1Q9C0D6 1143 aaPredicted RBP13.02□□□□□ -0.33
TARDBP-227ENST00000622057 KCNQ4P56696 695 aa13.01□□□□□ -0.33
TARDBP-227ENST00000622057 USHBP1Q8N6Y0 703 aa13.01□□□□□ -0.33
TARDBP-227ENST00000622057 USP47Q96K76 1375 aa13.01□□□□□ -0.33
TARDBP-227ENST00000622057 USP54Q70EL1 1684 aa13.01□□□□□ -0.33
TARDBP-227ENST00000622057 CDCA8Q53HL2 280 aa13□□□□□ -0.33
TARDBP-227ENST00000622057 SLC27A3Q5K4L6 730 aa13□□□□□ -0.33
TARDBP-227ENST00000622057 ARXQ96QS3 562 aa13□□□□□ -0.33
TARDBP-227ENST00000622057 HSP90AB2PQ58FF8 381 aa12.99□□□□□ -0.33
TARDBP-227ENST00000622057 RAPGEF4Q8WZA2 1011 aa12.99□□□□□ -0.33
TARDBP-227ENST00000622057 AKT1S1Q96B36 256 aa12.99□□□□□ -0.33
TARDBP-227ENST00000622057 SGIP1Q9BQI5 828 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms