RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 SMAP1Q8IYB5 467 aaPredicted RBP13.28□□□□□ -0.28
CDH1-214ENST00000621016 DEPDC5O75140 1603 aa13.27□□□□□ -0.28
CDH1-214ENST00000621016 TWISTNBQ3B726 338 aaPredicted RBP13.27□□□□□ -0.28
CDH1-214ENST00000621016 MBIPQ9NS73 344 aa13.27□□□□□ -0.28
CDH1-214ENST00000621016 TULP4Q9NRJ4 1543 aa13.27□□□□□ -0.29
CDH1-214ENST00000621016 ABCA9Q8IUA7 1624 aa13.27□□□□□ -0.29
CDH1-214ENST00000621016 FCHSD2O94868 740 aa13.27□□□□□ -0.29
CDH1-214ENST00000621016 MCM10Q7L590 875 aa13.27□□□□□ -0.29
CDH1-214ENST00000621016 JARID2Q92833 1246 aaPredicted RBP13.27□□□□□ -0.29
CDH1-214ENST00000621016 KIF16BQ96L93 1317 aa13.27□□□□□ -0.29
CDH1-214ENST00000621016 ADGRB3O60242 1522 aa13.26□□□□□ -0.29
CDH1-214ENST00000621016 ADGRB1O14514 1584 aa13.26□□□□□ -0.29
CDH1-214ENST00000621016 QRICH2Q9H0J4 1663 aa13.26□□□□□ -0.29
CDH1-214ENST00000621016 SLC4A10Q6U841 1118 aa13.26□□□□□ -0.29
CDH1-214ENST00000621016 COG3Q96JB2 828 aa13.26□□□□□ -0.29
CDH1-214ENST00000621016 ABCC11Q96J66 1382 aa13.26□□□□□ -0.29
CDH1-214ENST00000621016 C16orf71Q8IYS4 520 aaPredicted RBP13.26□□□□□ -0.29
CDH1-214ENST00000621016 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.25□□□□□ -0.29
CDH1-214ENST00000621016 SULT6B1Q6IMI4 303 aa13.25□□□□□ -0.29
CDH1-214ENST00000621016 BRD2P25440 801 aaKnown RBP13.25□□□□□ -0.29
CDH1-214ENST00000621016 TSC1Q92574 1164 aa13.25□□□□□ -0.29
CDH1-214ENST00000621016 ANTXR1Q9H6X2 564 aa13.25□□□□□ -0.29
CDH1-214ENST00000621016 YTHDC2Q9H6S0 1430 aaKnown RBP13.25□□□□□ -0.29
CDH1-214ENST00000621016 VAMP4O75379 141 aa13.24□□□□□ -0.29
CDH1-214ENST00000621016 NFE2L2Q16236 605 aa13.24□□□□□ -0.29
CDH1-214ENST00000621016 NUTM2GQ5VZR2 741 aa13.24□□□□□ -0.29
CDH1-214ENST00000621016 ABCC3O15438 1527 aa13.24□□□□□ -0.29
CDH1-214ENST00000621016 NRXN1Q9ULB1 1477 aa13.24□□□□□ -0.29
CDH1-214ENST00000621016 NCLP19338 710 aaKnown RBP13.24□□□□□ -0.29
CDH1-214ENST00000621016 ARAP3Q8WWN8 1544 aa13.24□□□□□ -0.29
CDH1-214ENST00000621016 UQCRHLA0A096LP55 91 aa13.24□□□□□ -0.29
CDH1-214ENST00000621016 UQCRHP07919 91 aa13.24□□□□□ -0.29
CDH1-214ENST00000621016 HDAC1Q13547 482 aaPredicted RBP13.24□□□□□ -0.29
CDH1-214ENST00000621016 NUDT16Q96DE0 195 aaKnown RBP13.24□□□□□ -0.29
CDH1-214ENST00000621016 SMARCA5O60264 1052 aaPredicted RBP13.23□□□□□ -0.29
CDH1-214ENST00000621016 TPRNQ4KMQ1 711 aa13.23□□□□□ -0.29
CDH1-214ENST00000621016 GLI2P10070 1586 aa13.23□□□□□ -0.29
CDH1-214ENST00000621016 MCM4P33991 863 aa13.23□□□□□ -0.29
CDH1-214ENST00000621016 SMC5Q8IY18 1101 aa13.23□□□□□ -0.29
CDH1-214ENST00000621016 IQSEC2Q5JU85 1478 aa13.23□□□□□ -0.29
CDH1-214ENST00000621016 SLC26A8Q96RN1 970 aa13.23□□□□□ -0.29
CDH1-214ENST00000621016 NUCB1Q02818 461 aa13.22□□□□□ -0.29
CDH1-214ENST00000621016 NSD2O96028 1365 aa13.22□□□□□ -0.29
CDH1-214ENST00000621016 FAM177BA6PVY3 158 aa13.22□□□□□ -0.29
CDH1-214ENST00000621016 ZBTB7BO15156 539 aaPredicted RBP13.22□□□□□ -0.29
CDH1-214ENST00000621016 TRAK2O60296 914 aa13.22□□□□□ -0.29
CDH1-214ENST00000621016 DMTNQ08495 405 aa13.22□□□□□ -0.29
CDH1-214ENST00000621016 FRMPD1Q5SYB0 1578 aa13.21□□□□□ -0.29
CDH1-214ENST00000621016 CD2BP2O95400 341 aaKnown RBP13.21□□□□□ -0.29
CDH1-214ENST00000621016 GNAI1P63096 354 aa13.21□□□□□ -0.29
CDH1-214ENST00000621016 FOXD4L5Q5VV16 416 aaPredicted RBP13.21□□□□□ -0.29
CDH1-214ENST00000621016 C14orf37Q86TY3 774 aa13.21□□□□□ -0.29
CDH1-214ENST00000621016 FOXD4L4Q8WXT5 416 aaPredicted RBP13.21□□□□□ -0.29
CDH1-214ENST00000621016 CHMP5Q9NZZ3 219 aa13.21□□□□□ -0.29
CDH1-214ENST00000621016 ZSCAN20P17040 1043 aaPredicted RBP13.21□□□□□ -0.29
CDH1-214ENST00000621016 OTUD7AQ8TE49 926 aaPredicted RBP13.21□□□□□ -0.29
CDH1-214ENST00000621016 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.29
CDH1-214ENST00000621016 XPCQ01831 940 aaPredicted RBP13.21□□□□□ -0.3
CDH1-214ENST00000621016 MRPL50Q8N5N7 158 aaKnown RBP13.21□□□□□ -0.3
CDH1-214ENST00000621016 GRPEL1Q9HAV7 217 aa13.21□□□□□ -0.3
CDH1-214ENST00000621016 WASLO00401 505 aaPredicted RBP13.2□□□□□ -0.3
CDH1-214ENST00000621016 CT47B1P0C2W7 299 aaPredicted RBP13.2□□□□□ -0.3
CDH1-214ENST00000621016 HSP90AB2PQ58FF8 381 aa13.2□□□□□ -0.3
CDH1-214ENST00000621016 SIRT2Q8IXJ6 389 aa13.2□□□□□ -0.3
CDH1-214ENST00000621016 MLH3Q9UHC1 1453 aa13.2□□□□□ -0.3
CDH1-214ENST00000621016 SHPRHQ149N8 1683 aa13.2□□□□□ -0.3
CDH1-214ENST00000621016 FOXO3O43524 673 aa13.2□□□□□ -0.3
CDH1-214ENST00000621016 TBC1D9Q6ZT07 1266 aa13.19□□□□□ -0.3
CDH1-214ENST00000621016 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
CDH1-214ENST00000621016 F6X3S4 739 aa13.19□□□□□ -0.3
CDH1-214ENST00000621016 TSHZ3Q63HK5 1081 aa13.19□□□□□ -0.3
CDH1-214ENST00000621016 NOL8Q76FK4 1167 aaKnown RBP13.19□□□□□ -0.3
CDH1-214ENST00000621016 ZNF428Q96B54 188 aa13.19□□□□□ -0.3
CDH1-214ENST00000621016 KIAA1210Q9ULL0 1709 aa13.19□□□□□ -0.3
CDH1-214ENST00000621016 MSNP26038 577 aaKnown RBP13.19□□□□□ -0.3
CDH1-214ENST00000621016 IL13P35225 146 aa13.18□□□□□ -0.3
CDH1-214ENST00000621016 CEBPAP49715 358 aaPredicted RBP13.18□□□□□ -0.3
CDH1-214ENST00000621016 TRERF1Q96PN7 1200 aa13.18□□□□□ -0.3
CDH1-214ENST00000621016 CCDC61Q9Y6R9 512 aa13.18□□□□□ -0.3
CDH1-214ENST00000621016 CAMSAP1Q5T5Y3 1602 aa13.18□□□□□ -0.3
CDH1-214ENST00000621016 NLRP1Q9C000 1473 aa13.17□□□□□ -0.3
CDH1-214ENST00000621016 ALDH1L2Q3SY69 923 aa13.17□□□□□ -0.3
CDH1-214ENST00000621016 SAMD1Q6SPF0 538 aaPredicted RBP13.17□□□□□ -0.3
CDH1-214ENST00000621016 RBM33Q96EV2 1170 aaKnown RBP13.17□□□□□ -0.3
CDH1-214ENST00000621016 PUS7Q96PZ0 661 aaKnown RBP13.17□□□□□ -0.3
CDH1-214ENST00000621016 SLC4A2P04920 1241 aa13.16□□□□□ -0.3
CDH1-214ENST00000621016 MRE11P49959 708 aa13.16□□□□□ -0.3
CDH1-214ENST00000621016 HECW2Q9P2P5 1572 aa13.16□□□□□ -0.3
CDH1-214ENST00000621016 SETBP1Q9Y6X0 1596 aa13.16□□□□□ -0.3
CDH1-214ENST00000621016 FOXD4L6Q3SYB3 417 aaPredicted RBP13.16□□□□□ -0.3
CDH1-214ENST00000621016 FOXD4L3Q6VB84 417 aaPredicted RBP13.16□□□□□ -0.3
CDH1-214ENST00000621016 IL16Q14005 1332 aa13.16□□□□□ -0.3
CDH1-214ENST00000621016 CNPY4Q8N129 248 aa13.16□□□□□ -0.3
CDH1-214ENST00000621016 TNPO1Q92973 898 aaKnown RBP13.16□□□□□ -0.3
CDH1-214ENST00000621016 PPIP5K1Q6PFW1 1433 aa13.15□□□□□ -0.3
CDH1-214ENST00000621016 NEXMIFQ5QGS0 1516 aa13.15□□□□□ -0.3
CDH1-214ENST00000621016 CFAP44Q96MT7 982 aa13.15□□□□□ -0.3
CDH1-214ENST00000621016 METP08581 1390 aa13.15□□□□□ -0.3
CDH1-214ENST00000621016 LMTK2Q8IWU2 1503 aa13.15□□□□□ -0.3
CDH1-214ENST00000621016 IRX3P78415 501 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms