RNA–Protein interactions for RNA: ENST00000620412.4

PMPCA-210, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-210ENST00000620412 HDGFL2Q7Z4V5 671 aaPredicted RBP29.8■■■□□ 2.36
PMPCA-210ENST00000620412 TTC21BQ7Z4L5 1316 aa29.78■■■□□ 2.36
PMPCA-210ENST00000620412 SLC12A5Q9H2X9 1139 aa29.78■■■□□ 2.36
PMPCA-210ENST00000620412 TMC1Q8TDI8 760 aa29.76■■■□□ 2.35
PMPCA-210ENST00000620412 EZH2Q15910 746 aaKnown RBP29.75■■■□□ 2.35
PMPCA-210ENST00000620412 USP31Q70CQ4 1352 aa29.75■■■□□ 2.35
PMPCA-210ENST00000620412 THRAP3Q9Y2W1 955 aaKnown RBP29.74■■■□□ 2.35
PMPCA-210ENST00000620412 APBA3O96018 575 aa29.73■■■□□ 2.35
PMPCA-210ENST00000620412 LMO7Q8WWI1 1683 aa29.72■■■□□ 2.35
PMPCA-210ENST00000620412 SOX12O15370 315 aa29.72■■■□□ 2.35
PMPCA-210ENST00000620412 COL5A2P05997 1499 aaPredicted RBP29.72■■■□□ 2.35
PMPCA-210ENST00000620412 AATKQ6ZMQ8 1374 aa29.71■■■□□ 2.35
PMPCA-210ENST00000620412 CAMKK2Q96RR4 588 aa29.7■■■□□ 2.35
PMPCA-210ENST00000620412 ABCC6O95255 1503 aa29.7■■■□□ 2.34
PMPCA-210ENST00000620412 R3HDM1Q15032 1099 aaKnown RBP29.69■■■□□ 2.34
PMPCA-210ENST00000620412 AXIN2Q9Y2T1 843 aa29.69■■■□□ 2.34
PMPCA-210ENST00000620412 KIF20BQ96Q89 1820 aa29.68■■■□□ 2.34
PMPCA-210ENST00000620412 TOM1L2Q6ZVM7 507 aa29.68■■■□□ 2.34
PMPCA-210ENST00000620412 OVOS2A0A0J9YW53 1432 aa29.68■■■□□ 2.34
PMPCA-210ENST00000620412 DISP2A7MBM2 1401 aa29.68■■■□□ 2.34
PMPCA-210ENST00000620412 OVOS2Q6IE36 1432 aa29.68■■■□□ 2.34
PMPCA-210ENST00000620412 RGPD1P0DJD0 1748 aa29.68■■■□□ 2.34
PMPCA-210ENST00000620412 CRB1P82279 1406 aa29.67■■■□□ 2.34
PMPCA-210ENST00000620412 NFAT5O94916 1531 aa29.66■■■□□ 2.34
PMPCA-210ENST00000620412 ARHGEF25Q86VW2 580 aa29.65■■■□□ 2.34
PMPCA-210ENST00000620412 KCNH5Q8NCM2 988 aa29.65■■■□□ 2.34
PMPCA-210ENST00000620412 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.63■■■□□ 2.33
PMPCA-210ENST00000620412 COL18A1P39060 1754 aa29.6■■■□□ 2.33
PMPCA-210ENST00000620412 WDR17Q8IZU2 1322 aa29.6■■■□□ 2.33
PMPCA-210ENST00000620412 TNS1Q9HBL0 1735 aaKnown RBP29.59■■■□□ 2.33
PMPCA-210ENST00000620412 CSB-PGBD3P0DP91 1061 aa29.59■■■□□ 2.33
PMPCA-210ENST00000620412 DDB1Q16531 1140 aa29.59■■■□□ 2.33
PMPCA-210ENST00000620412 ANKRD26Q9UPS8 1709 aa29.57■■■□□ 2.32
PMPCA-210ENST00000620412 LTN1O94822 1766 aa29.57■■■□□ 2.32
PMPCA-210ENST00000620412 PARD3Q8TEW0 1356 aa29.55■■■□□ 2.32
PMPCA-210ENST00000620412 KIF7Q2M1P5 1343 aa29.55■■■□□ 2.32
PMPCA-210ENST00000620412 C11orf95C9JLR9 678 aaPredicted RBP29.55■■■□□ 2.32
PMPCA-210ENST00000620412 NME9Q86XW9 330 aa29.55■■■□□ 2.32
PMPCA-210ENST00000620412 NSD3Q9BZ95 1437 aa29.54■■■□□ 2.32
PMPCA-210ENST00000620412 CARD10Q9BWT7 1032 aa29.53■■■□□ 2.32
PMPCA-210ENST00000620412 ZEB1P37275 1124 aaPredicted RBP29.52■■■□□ 2.32
PMPCA-210ENST00000620412 OVOS2A0A0G2JMS6 1433 aa29.51■■■□□ 2.31
PMPCA-210ENST00000620412 NBPF14Q5TI25 921 aa29.5■■■□□ 2.31
PMPCA-210ENST00000620412 MARCH10Q8NA82 808 aaPredicted RBP29.5■■■□□ 2.31
PMPCA-210ENST00000620412 CDCA7Q9BWT1 371 aaPredicted RBP29.5■■■□□ 2.31
PMPCA-210ENST00000620412 CARD14Q9BXL6 1004 aa29.5■■■□□ 2.31
PMPCA-210ENST00000620412 PARP4Q9UKK3 1724 aaKnown RBP29.49■■■□□ 2.31
PMPCA-210ENST00000620412 CCDC7Q96M83 1385 aa29.49■■■□□ 2.31
PMPCA-210ENST00000620412 LRP5O75197 1615 aa29.49■■■□□ 2.31
PMPCA-210ENST00000620412 FYB1O15117 783 aa29.48■■■□□ 2.31
PMPCA-210ENST00000620412 PTF1AQ7RTS3 328 aa29.48■■■□□ 2.31
PMPCA-210ENST00000620412 COG3Q96JB2 828 aa29.47■■■□□ 2.31
PMPCA-210ENST00000620412 NSD2O96028 1365 aa29.47■■■□□ 2.31
PMPCA-210ENST00000620412 CGNL1Q0VF96 1302 aa29.46■■■□□ 2.31
PMPCA-210ENST00000620412 RGPD5Q99666 1765 aa29.45■■■□□ 2.31
PMPCA-210ENST00000620412 EXOC5O00471 708 aa29.45■■■□□ 2.31
PMPCA-210ENST00000620412 BCL11BQ9C0K0 894 aaPredicted RBP29.44■■■□□ 2.3
PMPCA-210ENST00000620412 FAM208AQ9UK61 1670 aaKnown RBP29.44■■■□□ 2.3
PMPCA-210ENST00000620412 POLR3GLQ9BT43 218 aa29.43■■■□□ 2.3
PMPCA-210ENST00000620412 NLRP2Q9NX02 1062 aa29.43■■■□□ 2.3
PMPCA-210ENST00000620412 WASHC2AQ641Q2 1341 aa29.43■■■□□ 2.3
PMPCA-210ENST00000620412 LRRC37A3O60309 1634 aa29.42■■■□□ 2.3
PMPCA-210ENST00000620412 PLSCR1O15162 318 aa29.41■■■□□ 2.3
PMPCA-210ENST00000620412 PANK3Q9H999 370 aa29.41■■■□□ 2.3
PMPCA-210ENST00000620412 RTL1A6NKG5 1358 aa29.4■■■□□ 2.3
PMPCA-210ENST00000620412 KIF24Q5T7B8 1368 aa29.4■■■□□ 2.3
PMPCA-210ENST00000620412 WNK3Q9BYP7 1800 aa29.4■■■□□ 2.3
PMPCA-210ENST00000620412 PEAK1Q9H792 1746 aa29.4■■■□□ 2.3
PMPCA-210ENST00000620412 ANKRD24Q8TF21 1146 aa29.38■■■□□ 2.29
PMPCA-210ENST00000620412 ERBB3P21860 1342 aa29.38■■■□□ 2.29
PMPCA-210ENST00000620412 GGNBP2Q9H3C7 697 aa29.37■■■□□ 2.29
PMPCA-210ENST00000620412 RREB1Q92766 1687 aa29.35■■■□□ 2.29
PMPCA-210ENST00000620412 PROM2Q8N271 834 aa29.34■■■□□ 2.29
PMPCA-210ENST00000620412 NUP188Q5SRE5 1749 aa29.34■■■□□ 2.29
PMPCA-210ENST00000620412 BCL9O00512 1426 aa29.33■■■□□ 2.29
PMPCA-210ENST00000620412 KCNQ2O43526 872 aa29.32■■■□□ 2.28
PMPCA-210ENST00000620412 NPC1L1Q9UHC9 1359 aa29.31■■■□□ 2.28
PMPCA-210ENST00000620412 IL2RBP14784 551 aa29.31■■■□□ 2.28
PMPCA-210ENST00000620412 LTV1Q96GA3 475 aaPredicted RBP29.31■■■□□ 2.28
PMPCA-210ENST00000620412 ANO8Q9HCE9 1232 aaPredicted RBP29.31■■■□□ 2.28
PMPCA-210ENST00000620412 MAP2P11137 1827 aaKnown RBP29.31■■■□□ 2.28
PMPCA-210ENST00000620412 MAP3K19Q56UN5 1328 aa29.3■■■□□ 2.28
PMPCA-210ENST00000620412 ACSBG1Q96GR2 724 aa29.3■■■□□ 2.28
PMPCA-210ENST00000620412 PER1O15534 1290 aaPredicted RBP29.29■■■□□ 2.28
PMPCA-210ENST00000620412 IP6K1Q92551 441 aa29.29■■■□□ 2.28
PMPCA-210ENST00000620412 KNSTRNQ9Y448 316 aa29.29■■■□□ 2.28
PMPCA-210ENST00000620412 TNS2Q63HR2 1409 aa29.28■■■□□ 2.28
PMPCA-210ENST00000620412 FBLN1P23142 703 aa29.28■■■□□ 2.28
PMPCA-210ENST00000620412 SPON1Q9HCB6 807 aa29.28■■■□□ 2.28
PMPCA-210ENST00000620412 SMG6Q86US8 1419 aaKnown RBP29.28■■■□□ 2.28
PMPCA-210ENST00000620412 TXNRD1Q16881 649 aa29.27■■■□□ 2.28
PMPCA-210ENST00000620412 AMER1Q5JTC6 1135 aaPredicted RBP29.26■■■□□ 2.27
PMPCA-210ENST00000620412 FLT4P35916 1363 aa29.26■■■□□ 2.27
PMPCA-210ENST00000620412 PPP1R1BQ9UD71 204 aaPredicted RBP29.25■■■□□ 2.27
PMPCA-210ENST00000620412 SBF2Q86WG5 1849 aa29.24■■■□□ 2.27
PMPCA-210ENST00000620412 HOXC9P31274 260 aa29.23■■■□□ 2.27
PMPCA-210ENST00000620412 AMPHP49418 695 aa29.22■■■□□ 2.27
PMPCA-210ENST00000620412 PDGFDQ9GZP0 370 aaPredicted RBP29.22■■■□□ 2.27
PMPCA-210ENST00000620412 INSRP06213 1382 aa29.22■■■□□ 2.27
PMPCA-210ENST00000620412 STK32BQ9NY57 414 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms