RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 PHACTR3Q96KR7 559 aa38.14■■■■□ 3.7
KHSRP-213ENST00000619396 COG3Q96JB2 828 aa38.14■■■■□ 3.7
KHSRP-213ENST00000619396 PNNQ9H307 717 aaKnown RBP38.14■■■■□ 3.7
KHSRP-213ENST00000619396 DDX19BQ9UMR2 479 aa38.14■■■■□ 3.7
KHSRP-213ENST00000619396 UPF2Q9HAU5 1272 aaKnown RBP38.12■■■■□ 3.69
KHSRP-213ENST00000619396 NOB1Q9ULX3 412 aaKnown RBP38.12■■■■□ 3.69
KHSRP-213ENST00000619396 IL13P35225 146 aa38.11■■■■□ 3.69
KHSRP-213ENST00000619396 ITPRIPQ8IWB1 547 aa38.08■■■■□ 3.69
KHSRP-213ENST00000619396 EID1Q9Y6B2 187 aa38.08■■■■□ 3.69
KHSRP-213ENST00000619396 FER1L4A9Z1Z3 1794 aa38.07■■■■□ 3.69
KHSRP-213ENST00000619396 CDK12Q9NYV4 1490 aaPredicted RBP38.06■■■■□ 3.68
KHSRP-213ENST00000619396 AATKQ6ZMQ8 1374 aa38.06■■■■□ 3.68
KHSRP-213ENST00000619396 ZNF692Q9BU19 519 aaPredicted RBP38.06■■■■□ 3.68
KHSRP-213ENST00000619396 ACEP12821 1306 aa38.05■■■■□ 3.68
KHSRP-213ENST00000619396 TMEM57Q8N5G2 664 aa38.05■■■■□ 3.68
KHSRP-213ENST00000619396 THUMPD2Q9BTF0 503 aaKnown RBP38.04■■■■□ 3.68
KHSRP-213ENST00000619396 SMC5Q8IY18 1101 aa38.04■■■■□ 3.68
KHSRP-213ENST00000619396 ANTXR1Q9H6X2 564 aa38.04■■■■□ 3.68
KHSRP-213ENST00000619396 ZBTB40Q9NUA8 1239 aa38.04■■■■□ 3.68
KHSRP-213ENST00000619396 AMOTL2Q9Y2J4 779 aa38.03■■■■□ 3.68
KHSRP-213ENST00000619396 ALDH1L2Q3SY69 923 aa38.02■■■■□ 3.68
KHSRP-213ENST00000619396 KIF16BQ96L93 1317 aa38.02■■■■□ 3.68
KHSRP-213ENST00000619396 TOPAZ1Q8N9V7 1692 aa38.01■■■■□ 3.67
KHSRP-213ENST00000619396 IPO8O15397 1037 aaKnown RBP38■■■■□ 3.67
KHSRP-213ENST00000619396 TBC1D2Q9BYX2 928 aa38■■■■□ 3.67
KHSRP-213ENST00000619396 TRHP20396 242 aaPredicted RBP38■■■■□ 3.67
KHSRP-213ENST00000619396 TTC21BQ7Z4L5 1316 aa38■■■■□ 3.67
KHSRP-213ENST00000619396 SLIT1O75093 1534 aa38■■■■□ 3.67
KHSRP-213ENST00000619396 NFE2L2Q16236 605 aa37.99■■■■□ 3.67
KHSRP-213ENST00000619396 ARHGAP23Q9P227 1491 aa37.99■■■■□ 3.67
KHSRP-213ENST00000619396 NRKQ7Z2Y5 1582 aa37.97■■■■□ 3.67
KHSRP-213ENST00000619396 BRPF1P55201 1214 aaPredicted RBP37.96■■■■□ 3.67
KHSRP-213ENST00000619396 SLKQ9H2G2 1235 aaPredicted RBP37.96■■■■□ 3.67
KHSRP-213ENST00000619396 PLEKHG3A1L390 1219 aa37.95■■■■□ 3.67
KHSRP-213ENST00000619396 ZNF428Q96B54 188 aa37.93■■■■□ 3.66
KHSRP-213ENST00000619396 BRPF3Q9ULD4 1205 aa37.92■■■■□ 3.66
KHSRP-213ENST00000619396 TBX22Q9Y458 520 aa37.92■■■■□ 3.66
KHSRP-213ENST00000619396 USP6P35125 1406 aa37.91■■■■□ 3.66
KHSRP-213ENST00000619396 DLG5Q8TDM6 1919 aa37.9■■■■□ 3.66
KHSRP-213ENST00000619396 SOX12O15370 315 aa37.89■■■■□ 3.66
KHSRP-213ENST00000619396 THEMISQ8N1K5 641 aaPredicted RBP37.89■■■■□ 3.66
KHSRP-213ENST00000619396 C22orf23Q9BZE7 217 aa37.88■■■■□ 3.66
KHSRP-213ENST00000619396 RGPD8O14715 1765 aaPredicted RBP37.87■■■■□ 3.65
KHSRP-213ENST00000619396 OVOS2A0A0J9YW53 1432 aa37.87■■■■□ 3.65
KHSRP-213ENST00000619396 OVOS2Q6IE36 1432 aa37.87■■■■□ 3.65
KHSRP-213ENST00000619396 NUCB1Q02818 461 aa37.87■■■■□ 3.65
KHSRP-213ENST00000619396 AEBP1Q8IUX7 1158 aa37.87■■■■□ 3.65
KHSRP-213ENST00000619396 FAM83GA6ND36 823 aa37.85■■■■□ 3.65
KHSRP-213ENST00000619396 EIF4A2Q14240 407 aaKnown RBP37.85■■■■□ 3.65
KHSRP-213ENST00000619396 VAMP4O75379 141 aa37.84■■■■□ 3.65
KHSRP-213ENST00000619396 MFAP1P55081 439 aaKnown RBP37.84■■■■□ 3.65
KHSRP-213ENST00000619396 TSPYL6Q8N831 410 aa37.83■■■■□ 3.65
KHSRP-213ENST00000619396 DCTN1Q14203 1278 aa37.82■■■■□ 3.64
KHSRP-213ENST00000619396 MRPL50Q8N5N7 158 aaKnown RBP37.81■■■■□ 3.64
KHSRP-213ENST00000619396 PEAK1Q9H792 1746 aa37.81■■■■□ 3.64
KHSRP-213ENST00000619396 PTCH1Q13635 1447 aa37.81■■■■□ 3.64
KHSRP-213ENST00000619396 HSP90AB2PQ58FF8 381 aa37.8■■■■□ 3.64
KHSRP-213ENST00000619396 ARHGAP45Q92619 1136 aa37.8■■■■□ 3.64
KHSRP-213ENST00000619396 ELL2O00472 640 aaPredicted RBP37.8■■■■□ 3.64
KHSRP-213ENST00000619396 ZNF853P0CG23 659 aa37.8■■■■□ 3.64
KHSRP-213ENST00000619396 CALD1Q05682 793 aaKnown RBP37.8■■■■□ 3.64
KHSRP-213ENST00000619396 DIP2AQ14689 1571 aa37.8■■■■□ 3.64
KHSRP-213ENST00000619396 RTN4Q9NQC3 1192 aaKnown RBP37.8■■■■□ 3.64
KHSRP-213ENST00000619396 MBIPQ9NS73 344 aa37.8■■■■□ 3.64
KHSRP-213ENST00000619396 PIK3R4Q99570 1358 aa37.8■■■■□ 3.64
KHSRP-213ENST00000619396 SSH2Q76I76 1423 aa37.79■■■■□ 3.64
KHSRP-213ENST00000619396 ZBTB7BO15156 539 aaPredicted RBP37.79■■■■□ 3.64
KHSRP-213ENST00000619396 SULT6B1Q6IMI4 303 aa37.79■■■■□ 3.64
KHSRP-213ENST00000619396 IFT57Q9NWB7 429 aa37.79■■■■□ 3.64
KHSRP-213ENST00000619396 NALCNQ8IZF0 1738 aa37.77■■■■□ 3.64
KHSRP-213ENST00000619396 KCNA6P17658 529 aa37.76■■■■□ 3.64
KHSRP-213ENST00000619396 GNAI1P63096 354 aa37.76■■■■□ 3.64
KHSRP-213ENST00000619396 CHD1LQ86WJ1 897 aa37.76■■■■□ 3.64
KHSRP-213ENST00000619396 NGDNQ8NEJ9 315 aaKnown RBP37.75■■■■□ 3.63
KHSRP-213ENST00000619396 LNPKQ9C0E8 428 aa37.73■■■■□ 3.63
KHSRP-213ENST00000619396 XRN1Q8IZH2 1706 aaKnown RBP37.73■■■■□ 3.63
KHSRP-213ENST00000619396 USP31Q70CQ4 1352 aa37.72■■■■□ 3.63
KHSRP-213ENST00000619396 CHMP4BQ9H444 224 aaKnown RBP37.7■■■■□ 3.63
KHSRP-213ENST00000619396 C8orf58Q8NAV2 365 aa37.69■■■■□ 3.62
KHSRP-213ENST00000619396 CEP170BQ9Y4F5 1589 aaPredicted RBP37.69■■■■□ 3.62
KHSRP-213ENST00000619396 CFAP44Q96MT7 982 aa37.68■■■■□ 3.62
KHSRP-213ENST00000619396 ABCC4O15439 1325 aa37.68■■■■□ 3.62
KHSRP-213ENST00000619396 MAP3K19Q56UN5 1328 aa37.68■■■■□ 3.62
KHSRP-213ENST00000619396 RBM25P49756 843 aaKnown RBP37.68■■■■□ 3.62
KHSRP-213ENST00000619396 LMOD3Q0VAK6 560 aa37.68■■■■□ 3.62
KHSRP-213ENST00000619396 SPRYD3Q8NCJ5 442 aa37.67■■■■□ 3.62
KHSRP-213ENST00000619396 GCC1Q96CN9 775 aa37.67■■■■□ 3.62
KHSRP-213ENST00000619396 RIMS1Q86UR5 1692 aaKnown RBP37.67■■■■□ 3.62
KHSRP-213ENST00000619396 TTC21AQ8NDW8 1320 aa37.66■■■■□ 3.62
KHSRP-213ENST00000619396 BMP2KLQ5H9B9 411 aa37.65■■■■□ 3.62
KHSRP-213ENST00000619396 TWISTNBQ3B726 338 aaPredicted RBP37.64■■■■□ 3.62
KHSRP-213ENST00000619396 CHMP5Q9NZZ3 219 aa37.64■■■■□ 3.62
KHSRP-213ENST00000619396 RGPD1P0DJD0 1748 aa37.63■■■■□ 3.61
KHSRP-213ENST00000619396 RBM33Q96EV2 1170 aaKnown RBP37.63■■■■□ 3.61
KHSRP-213ENST00000619396 NUTM2GQ5VZR2 741 aa37.62■■■■□ 3.61
KHSRP-213ENST00000619396 SIRT2Q8IXJ6 389 aa37.62■■■■□ 3.61
KHSRP-213ENST00000619396 C1orf115Q9H7X2 142 aa37.62■■■■□ 3.61
KHSRP-213ENST00000619396 PIK3C2AO00443 1686 aa37.62■■■■□ 3.61
KHSRP-213ENST00000619396 MCM10Q7L590 875 aa37.61■■■■□ 3.61
KHSRP-213ENST00000619396 ANKRD45Q5TZF3 282 aa37.61■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 190.1 ms