RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 KIAA0232Q92628 1395 aa27.23■■□□□ 1.95
SDHA-220ENST00000617470 MAP2P11137 1827 aaKnown RBP27.22■■□□□ 1.95
SDHA-220ENST00000617470 PRDM11Q9NQV5 511 aa27.22■■□□□ 1.95
SDHA-220ENST00000617470 CHRNA2Q15822 529 aa27.21■■□□□ 1.95
SDHA-220ENST00000617470 ARHGEF25Q86VW2 580 aa27.21■■□□□ 1.95
SDHA-220ENST00000617470 SPATA31A6Q5VVP1 1343 aa27.21■■□□□ 1.95
SDHA-220ENST00000617470 NUDCQ9Y266 331 aa27.19■■□□□ 1.94
SDHA-220ENST00000617470 WDR43Q15061 677 aaKnown RBP eCLIP27.18■■□□□ 1.94
SDHA-220ENST00000617470 LTN1O94822 1766 aa27.18■■□□□ 1.94
SDHA-220ENST00000617470 NEFLP07196 543 aa27.17■■□□□ 1.94
SDHA-220ENST00000617470 CPDO75976 1380 aa27.17■■□□□ 1.94
SDHA-220ENST00000617470 SALL2Q9Y467 1007 aaPredicted RBP27.16■■□□□ 1.94
SDHA-220ENST00000617470 CFAP53Q96M91 514 aa27.15■■□□□ 1.94
SDHA-220ENST00000617470 FLT4P35916 1363 aa27.15■■□□□ 1.94
SDHA-220ENST00000617470 FAM83GA6ND36 823 aa27.15■■□□□ 1.94
SDHA-220ENST00000617470 HOXC9P31274 260 aa27.15■■□□□ 1.94
SDHA-220ENST00000617470 HSP90AB2PQ58FF8 381 aa27.14■■□□□ 1.94
SDHA-220ENST00000617470 MEX3CQ5U5Q3 659 aaKnown RBP27.14■■□□□ 1.94
SDHA-220ENST00000617470 IP6K1Q92551 441 aa27.13■■□□□ 1.93
SDHA-220ENST00000617470 PEAK1Q9H792 1746 aa27.13■■□□□ 1.93
SDHA-220ENST00000617470 LRP6O75581 1613 aa27.12■■□□□ 1.93
SDHA-220ENST00000617470 RTL1A6NKG5 1358 aa27.12■■□□□ 1.93
SDHA-220ENST00000617470 LTV1Q96GA3 475 aaPredicted RBP27.11■■□□□ 1.93
SDHA-220ENST00000617470 AXIN2Q9Y2T1 843 aa27.11■■□□□ 1.93
SDHA-220ENST00000617470 CDK12Q9NYV4 1490 aaPredicted RBP27.11■■□□□ 1.93
SDHA-220ENST00000617470 KIF24Q5T7B8 1368 aa27.11■■□□□ 1.93
SDHA-220ENST00000617470 C8orf37Q96NL8 207 aa27.1■■□□□ 1.93
SDHA-220ENST00000617470 PDE3BQ13370 1112 aa27.08■■□□□ 1.93
SDHA-220ENST00000617470 ILDR1Q86SU0 546 aaPredicted RBP27.08■■□□□ 1.92
SDHA-220ENST00000617470 NGLY1Q96IV0 654 aa27.08■■□□□ 1.92
SDHA-220ENST00000617470 BTG4Q9NY30 223 aa27.07■■□□□ 1.92
SDHA-220ENST00000617470 DIAPH1O60610 1272 aaKnown RBP27.06■■□□□ 1.92
SDHA-220ENST00000617470 IRX6P78412 446 aaPredicted RBP27.06■■□□□ 1.92
SDHA-220ENST00000617470 ANKRD24Q8TF21 1146 aa27.05■■□□□ 1.92
SDHA-220ENST00000617470 CDCA7LQ96GN5 454 aa27.05■■□□□ 1.92
SDHA-220ENST00000617470 COL14A1Q05707 1796 aaKnown RBP27.05■■□□□ 1.92
SDHA-220ENST00000617470 COL18A1P39060 1754 aa27.04■■□□□ 1.92
SDHA-220ENST00000617470 EIF4A2Q14240 407 aaKnown RBP27.04■■□□□ 1.92
SDHA-220ENST00000617470 CCDC146Q8IYE0 955 aa27.04■■□□□ 1.92
SDHA-220ENST00000617470 STRN4Q9NRL3 753 aa27.04■■□□□ 1.92
SDHA-220ENST00000617470 CSB-PGBD3P0DP91 1061 aa27.04■■□□□ 1.92
SDHA-220ENST00000617470 EVA1CP58658 441 aa27.04■■□□□ 1.92
SDHA-220ENST00000617470 RGPD5Q99666 1765 aa27.03■■□□□ 1.92
SDHA-220ENST00000617470 CAMTA1Q9Y6Y1 1673 aa27.03■■□□□ 1.92
SDHA-220ENST00000617470 RNF123Q5XPI4 1314 aa27.02■■□□□ 1.92
SDHA-220ENST00000617470 ZNF521Q96K83 1311 aa27.02■■□□□ 1.92
SDHA-220ENST00000617470 ABCC6O95255 1503 aa27.02■■□□□ 1.92
SDHA-220ENST00000617470 U2SURPO15042 1029 aaKnown RBP27.02■■□□□ 1.92
SDHA-220ENST00000617470 COL3A1P02461 1466 aaPredicted RBP27.01■■□□□ 1.92
SDHA-220ENST00000617470 LMO7Q8WWI1 1683 aa27.01■■□□□ 1.91
SDHA-220ENST00000617470 ERBB3P21860 1342 aa27■■□□□ 1.91
SDHA-220ENST00000617470 IL13P35225 146 aa27■■□□□ 1.91
SDHA-220ENST00000617470 PLCH1Q4KWH8 1693 aa26.99■■□□□ 1.91
SDHA-220ENST00000617470 COL5A2P05997 1499 aaPredicted RBP26.98■■□□□ 1.91
SDHA-220ENST00000617470 APAF1O14727 1248 aa26.97■■□□□ 1.91
SDHA-220ENST00000617470 NLRP2Q9NX02 1062 aa26.97■■□□□ 1.91
SDHA-220ENST00000617470 U2AF1L5P0DN76 240 aaPredicted RBP26.96■■□□□ 1.91
SDHA-220ENST00000617470 U2AF1Q01081 240 aaKnown RBP eCLIP26.96■■□□□ 1.91
SDHA-220ENST00000617470 TOM1L2Q6ZVM7 507 aa26.96■■□□□ 1.91
SDHA-220ENST00000617470 SLIT2O94813 1529 aa26.95■■□□□ 1.91
SDHA-220ENST00000617470 LARP1Q6PKG0 1096 aaKnown RBP26.95■■□□□ 1.91
SDHA-220ENST00000617470 AFF2P51816 1311 aa26.95■■□□□ 1.9
SDHA-220ENST00000617470 WDR17Q8IZU2 1322 aa26.95■■□□□ 1.9
SDHA-220ENST00000617470 EYA1Q99502 592 aa26.95■■□□□ 1.9
SDHA-220ENST00000617470 FNBP4Q8N3X1 1017 aaPredicted RBP26.94■■□□□ 1.9
SDHA-220ENST00000617470 USHBP1Q8N6Y0 703 aa26.94■■□□□ 1.9
SDHA-220ENST00000617470 USP21Q9UK80 565 aa26.94■■□□□ 1.9
SDHA-220ENST00000617470 NBPF6Q5VWK0 638 aa26.93■■□□□ 1.9
SDHA-220ENST00000617470 UNC5CLQ8IV45 518 aa26.93■■□□□ 1.9
SDHA-220ENST00000617470 NBPF4Q96M43 638 aa26.93■■□□□ 1.9
SDHA-220ENST00000617470 CCDC9Q9Y3X0 531 aaKnown RBP26.92■■□□□ 1.9
SDHA-220ENST00000617470 HMOX1P09601 288 aa26.91■■□□□ 1.9
SDHA-220ENST00000617470 USP35Q9P2H5 1018 aa26.91■■□□□ 1.9
SDHA-220ENST00000617470 ERICH6BQ5W0A0 696 aa26.91■■□□□ 1.9
SDHA-220ENST00000617470 NWD2Q9ULI1 1742 aa26.91■■□□□ 1.9
SDHA-220ENST00000617470 BCL9LQ86UU0 1499 aa26.9■■□□□ 1.9
SDHA-220ENST00000617470 SULT6B1Q6IMI4 303 aa26.89■■□□□ 1.9
SDHA-220ENST00000617470 RGPD2P0DJD1 1756 aa26.89■■□□□ 1.89
SDHA-220ENST00000617470 NRAPQ86VF7 1730 aa26.88■■□□□ 1.89
SDHA-220ENST00000617470 RUNDC1Q96C34 613 aa26.88■■□□□ 1.89
SDHA-220ENST00000617470 IGSF1Q8N6C5 1336 aa26.88■■□□□ 1.89
SDHA-220ENST00000617470 AEBP1Q8IUX7 1158 aa26.88■■□□□ 1.89
SDHA-220ENST00000617470 RCAN3Q9UKA8 241 aa26.88■■□□□ 1.89
SDHA-220ENST00000617470 CRB1P82279 1406 aa26.87■■□□□ 1.89
SDHA-220ENST00000617470 GOLGA2Q08379 1002 aa26.86■■□□□ 1.89
SDHA-220ENST00000617470 DUSP27Q5VZP5 1158 aa26.86■■□□□ 1.89
SDHA-220ENST00000617470 NGEFQ8N5V2 710 aa26.86■■□□□ 1.89
SDHA-220ENST00000617470 FAM208AQ9UK61 1670 aaKnown RBP26.86■■□□□ 1.89
SDHA-220ENST00000617470 CARD10Q9BWT7 1032 aa26.85■■□□□ 1.89
SDHA-220ENST00000617470 RGPD1P0DJD0 1748 aa26.84■■□□□ 1.89
SDHA-220ENST00000617470 SLFN5Q08AF3 891 aa26.84■■□□□ 1.89
SDHA-220ENST00000617470 TRMT2AQ8IZ69 625 aaKnown RBP26.84■■□□□ 1.89
SDHA-220ENST00000617470 VPS72Q15906 364 aa26.83■■□□□ 1.89
SDHA-220ENST00000617470 SPINK5Q9NQ38 1064 aaPredicted RBP26.83■■□□□ 1.89
SDHA-220ENST00000617470 PHF23Q9BUL5 403 aaPredicted RBP26.82■■□□□ 1.88
SDHA-220ENST00000617470 TCP11L2Q8N4U5 519 aa26.82■■□□□ 1.88
SDHA-220ENST00000617470 FCHSD2O94868 740 aa26.81■■□□□ 1.88
SDHA-220ENST00000617470 PRKAR2BP31323 418 aa26.81■■□□□ 1.88
SDHA-220ENST00000617470 SPATA31A5Q5VU36 1347 aa26.81■■□□□ 1.88
SDHA-220ENST00000617470 SPATA31A7Q8IWB4 1347 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 215.9 ms