RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 RGPD1P0DJD0 1748 aa26.97■■□□□ 1.91
CNTNAP3B-212ENST00000617422 PLIN1O60240 522 aa26.97■■□□□ 1.91
CNTNAP3B-212ENST00000617422 AEBP1Q8IUX7 1158 aa26.95■■□□□ 1.91
CNTNAP3B-212ENST00000617422 SBNO1A3KN83 1393 aa26.95■■□□□ 1.9
CNTNAP3B-212ENST00000617422 RIPK4P57078 832 aa26.95■■□□□ 1.9
CNTNAP3B-212ENST00000617422 PNNQ9H307 717 aaKnown RBP26.94■■□□□ 1.9
CNTNAP3B-212ENST00000617422 PPP4R2Q9NY27 417 aa26.94■■□□□ 1.9
CNTNAP3B-212ENST00000617422 NCOA3Q9Y6Q9 1424 aa26.94■■□□□ 1.9
CNTNAP3B-212ENST00000617422 TRPM3Q9HCF6 1732 aaPredicted RBP26.93■■□□□ 1.9
CNTNAP3B-212ENST00000617422 FLT4P35916 1363 aa26.93■■□□□ 1.9
CNTNAP3B-212ENST00000617422 DCCP43146 1447 aa26.92■■□□□ 1.9
CNTNAP3B-212ENST00000617422 ATF3P18847 181 aa26.91■■□□□ 1.9
CNTNAP3B-212ENST00000617422 KIF1AQ12756 1690 aa26.91■■□□□ 1.9
CNTNAP3B-212ENST00000617422 ZNF335Q9H4Z2 1342 aaPredicted RBP26.91■■□□□ 1.9
CNTNAP3B-212ENST00000617422 NFAT5O94916 1531 aa26.9■■□□□ 1.9
CNTNAP3B-212ENST00000617422 SULT6B1Q6IMI4 303 aa26.9■■□□□ 1.9
CNTNAP3B-212ENST00000617422 AMPHP49418 695 aa26.89■■□□□ 1.9
CNTNAP3B-212ENST00000617422 DLG5Q8TDM6 1919 aa26.88■■□□□ 1.89
CNTNAP3B-212ENST00000617422 NFE2L2Q16236 605 aa26.88■■□□□ 1.89
CNTNAP3B-212ENST00000617422 LTN1O94822 1766 aa26.88■■□□□ 1.89
CNTNAP3B-212ENST00000617422 B4GALNT3Q6L9W6 998 aa26.88■■□□□ 1.89
CNTNAP3B-212ENST00000617422 DDX17Q92841 729 aaKnown RBP26.87■■□□□ 1.89
CNTNAP3B-212ENST00000617422 HOXC9P31274 260 aa26.87■■□□□ 1.89
CNTNAP3B-212ENST00000617422 KRT28Q7Z3Y7 464 aa26.87■■□□□ 1.89
CNTNAP3B-212ENST00000617422 C20orf194Q5TEA3 1177 aa26.86■■□□□ 1.89
CNTNAP3B-212ENST00000617422 EXOC6Q8TAG9 804 aa26.86■■□□□ 1.89
CNTNAP3B-212ENST00000617422 BCAR3O75815 825 aa26.85■■□□□ 1.89
CNTNAP3B-212ENST00000617422 TSR2Q969E8 191 aaKnown RBP26.85■■□□□ 1.89
CNTNAP3B-212ENST00000617422 FANCIQ9NVI1 1328 aa26.83■■□□□ 1.89
CNTNAP3B-212ENST00000617422 MSH6P52701 1360 aa26.83■■□□□ 1.89
CNTNAP3B-212ENST00000617422 CADPS2Q86UW7 1296 aa26.83■■□□□ 1.89
CNTNAP3B-212ENST00000617422 NEFMP07197 916 aa26.82■■□□□ 1.88
CNTNAP3B-212ENST00000617422 THUMPD2Q9BTF0 503 aaKnown RBP26.82■■□□□ 1.88
CNTNAP3B-212ENST00000617422 KIF24Q5T7B8 1368 aa26.82■■□□□ 1.88
CNTNAP3B-212ENST00000617422 EYA1Q99502 592 aa26.82■■□□□ 1.88
CNTNAP3B-212ENST00000617422 MYH16Q9H6N6 1097 aa26.82■■□□□ 1.88
CNTNAP3B-212ENST00000617422 ARHGEF10O15013 1369 aa26.81■■□□□ 1.88
CNTNAP3B-212ENST00000617422 ALS2Q96Q42 1657 aa26.81■■□□□ 1.88
CNTNAP3B-212ENST00000617422 PLEKHG5O94827 1062 aa26.81■■□□□ 1.88
CNTNAP3B-212ENST00000617422 SLIT3O75094 1523 aa26.8■■□□□ 1.88
CNTNAP3B-212ENST00000617422 IL16Q14005 1332 aa26.8■■□□□ 1.88
CNTNAP3B-212ENST00000617422 LMOD2Q6P5Q4 547 aa26.8■■□□□ 1.88
CNTNAP3B-212ENST00000617422 IGSF1Q8N6C5 1336 aa26.79■■□□□ 1.88
CNTNAP3B-212ENST00000617422 KDRP35968 1356 aa26.79■■□□□ 1.88
CNTNAP3B-212ENST00000617422 FAM83GA6ND36 823 aa26.77■■□□□ 1.88
CNTNAP3B-212ENST00000617422 CRBNQ96SW2 442 aa26.77■■□□□ 1.88
CNTNAP3B-212ENST00000617422 USP19O94966 1318 aa26.77■■□□□ 1.88
CNTNAP3B-212ENST00000617422 GCP02774 474 aa26.77■■□□□ 1.88
CNTNAP3B-212ENST00000617422 RTL1A6NKG5 1358 aa26.77■■□□□ 1.88
CNTNAP3B-212ENST00000617422 LTV1Q96GA3 475 aaPredicted RBP26.76■■□□□ 1.87
CNTNAP3B-212ENST00000617422 PHRF1Q9P1Y6 1649 aaKnown RBP26.76■■□□□ 1.87
CNTNAP3B-212ENST00000617422 RARSP54136 660 aaKnown RBP26.75■■□□□ 1.87
CNTNAP3B-212ENST00000617422 KCNH5Q8NCM2 988 aa26.75■■□□□ 1.87
CNTNAP3B-212ENST00000617422 IP6K1Q92551 441 aa26.75■■□□□ 1.87
CNTNAP3B-212ENST00000617422 EXOSC9Q06265 439 aaKnown RBP26.75■■□□□ 1.87
CNTNAP3B-212ENST00000617422 MED1Q15648 1581 aaPredicted RBP26.74■■□□□ 1.87
CNTNAP3B-212ENST00000617422 DCTN1Q14203 1278 aa26.74■■□□□ 1.87
CNTNAP3B-212ENST00000617422 PXDNQ92626 1479 aa26.72■■□□□ 1.87
CNTNAP3B-212ENST00000617422 ZBTB7CA1YPR0 619 aa26.72■■□□□ 1.87
CNTNAP3B-212ENST00000617422 ARHGEF25Q86VW2 580 aa26.72■■□□□ 1.87
CNTNAP3B-212ENST00000617422 BRINP3Q76B58 766 aa26.71■■□□□ 1.87
CNTNAP3B-212ENST00000617422 BCL2L13Q9BXK5 485 aa26.71■■□□□ 1.87
CNTNAP3B-212ENST00000617422 NPHP3Q7Z494 1330 aa26.7■■□□□ 1.86
CNTNAP3B-212ENST00000617422 RGPD2P0DJD1 1756 aa26.7■■□□□ 1.86
CNTNAP3B-212ENST00000617422 CCDC136Q96JN2 1154 aa26.7■■□□□ 1.86
CNTNAP3B-212ENST00000617422 MTHFSDQ2M296 383 aaKnown RBP26.69■■□□□ 1.86
CNTNAP3B-212ENST00000617422 LAS1LQ9Y4W2 734 aaKnown RBP26.69■■□□□ 1.86
CNTNAP3B-212ENST00000617422 ZNF853P0CG23 659 aa26.68■■□□□ 1.86
CNTNAP3B-212ENST00000617422 USHBP1Q8N6Y0 703 aa26.68■■□□□ 1.86
CNTNAP3B-212ENST00000617422 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.68■■□□□ 1.86
CNTNAP3B-212ENST00000617422 LMOD3Q0VAK6 560 aa26.67■■□□□ 1.86
CNTNAP3B-212ENST00000617422 SLAIN2Q9P270 581 aa26.66■■□□□ 1.86
CNTNAP3B-212ENST00000617422 NBPF6Q5VWK0 638 aa26.65■■□□□ 1.86
CNTNAP3B-212ENST00000617422 NBPF4Q96M43 638 aa26.65■■□□□ 1.86
CNTNAP3B-212ENST00000617422 TNS3Q68CZ2 1445 aa26.65■■□□□ 1.86
CNTNAP3B-212ENST00000617422 MCM10Q7L590 875 aa26.65■■□□□ 1.86
CNTNAP3B-212ENST00000617422 MBIPQ9NS73 344 aa26.65■■□□□ 1.86
CNTNAP3B-212ENST00000617422 IFT57Q9NWB7 429 aa26.65■■□□□ 1.86
CNTNAP3B-212ENST00000617422 AXIN2Q9Y2T1 843 aa26.65■■□□□ 1.86
CNTNAP3B-212ENST00000617422 RGPD5Q99666 1765 aa26.64■■□□□ 1.86
CNTNAP3B-212ENST00000617422 TNNQ9UQP3 1299 aa26.64■■□□□ 1.85
CNTNAP3B-212ENST00000617422 CABLES1Q8TDN4 633 aa26.63■■□□□ 1.85
CNTNAP3B-212ENST00000617422 LRRC59Q96AG4 307 aaKnown RBP26.63■■□□□ 1.85
CNTNAP3B-212ENST00000617422 CT47B1P0C2W7 299 aaPredicted RBP26.63■■□□□ 1.85
CNTNAP3B-212ENST00000617422 CALD1Q05682 793 aaKnown RBP26.63■■□□□ 1.85
CNTNAP3B-212ENST00000617422 FRAT1Q92837 279 aaPredicted RBP26.63■■□□□ 1.85
CNTNAP3B-212ENST00000617422 CRYBG1Q9Y4K1 1723 aa26.63■■□□□ 1.85
CNTNAP3B-212ENST00000617422 SPATA31A3Q5VYP0 1347 aa26.62■■□□□ 1.85
CNTNAP3B-212ENST00000617422 ZC3H6P61129 1189 aaKnown RBP26.62■■□□□ 1.85
CNTNAP3B-212ENST00000617422 GNAI1P63096 354 aa26.62■■□□□ 1.85
CNTNAP3B-212ENST00000617422 CFAP44Q96MT7 982 aa26.62■■□□□ 1.85
CNTNAP3B-212ENST00000617422 SSH1Q8WYL5 1049 aa26.61■■□□□ 1.85
CNTNAP3B-212ENST00000617422 PANK1Q8TE04 598 aa26.6■■□□□ 1.85
CNTNAP3B-212ENST00000617422 TSPYL6Q8N831 410 aa26.6■■□□□ 1.85
CNTNAP3B-212ENST00000617422 MSH5O43196 834 aa26.58■■□□□ 1.85
CNTNAP3B-212ENST00000617422 CRB1P82279 1406 aa26.58■■□□□ 1.85
CNTNAP3B-212ENST00000617422 RLBP1P12271 317 aa26.57■■□□□ 1.84
CNTNAP3B-212ENST00000617422 PDE3AQ14432 1141 aa26.57■■□□□ 1.84
CNTNAP3B-212ENST00000617422 ANKRD24Q8TF21 1146 aa26.57■■□□□ 1.84
CNTNAP3B-212ENST00000617422 COL18A1P39060 1754 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms