RNA–Protein interactions for RNA: ENST00000616659.1

C3orf49-203, Transcript of chromosome 3 open reading frame 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C3orf49, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-203ENST00000616659 ZBTB33Q86T24 672 aa9.74□□□□□ -0.85
C3orf49-203ENST00000616659 CCDC116Q8IYX3 515 aa9.74□□□□□ -0.85
C3orf49-203ENST00000616659 PNMA1Q8ND90 353 aa9.74□□□□□ -0.85
C3orf49-203ENST00000616659 CDV3Q9UKY7 258 aaKnown RBP9.74□□□□□ -0.85
C3orf49-203ENST00000616659 SOCS7O14512 581 aa9.73□□□□□ -0.85
C3orf49-203ENST00000616659 NFX1Q12986 1120 aaKnown RBP9.73□□□□□ -0.85
C3orf49-203ENST00000616659 TREML4Q6UXN2 200 aa9.73□□□□□ -0.85
C3orf49-203ENST00000616659 MEIOBQ8N635 442 aa9.73□□□□□ -0.85
C3orf49-203ENST00000616659 GPR37L1O60883 481 aa9.72□□□□□ -0.85
C3orf49-203ENST00000616659 BANK1Q8NDB2 785 aa9.72□□□□□ -0.85
C3orf49-203ENST00000616659 PURBQ96QR8 312 aaKnown RBP9.72□□□□□ -0.85
C3orf49-203ENST00000616659 KCTD15Q96SI1 283 aaPredicted RBP9.72□□□□□ -0.85
C3orf49-203ENST00000616659 EMILIN1Q9Y6C2 1016 aa9.72□□□□□ -0.85
C3orf49-203ENST00000616659 INTS6LQ5JSJ4 861 aaKnown RBP9.71□□□□□ -0.86
C3orf49-203ENST00000616659 MTMR14Q8NCE2 650 aa9.71□□□□□ -0.86
C3orf49-203ENST00000616659 PPP1R26Q5T8A7 1209 aaPredicted RBP9.7□□□□□ -0.86
C3orf49-203ENST00000616659 LCE2CQ5TA81 110 aa9.7□□□□□ -0.86
C3orf49-203ENST00000616659 SCARF1Q14162 830 aa9.69□□□□□ -0.86
C3orf49-203ENST00000616659 LINC00528Q8N1L1 170 aa9.69□□□□□ -0.86
C3orf49-203ENST00000616659 TERTO14746 1132 aaKnown RBP9.67□□□□□ -0.86
C3orf49-203ENST00000616659 WFS1O76024 890 aa9.67□□□□□ -0.86
C3orf49-203ENST00000616659 NBPF20Q3BBV1 942 aa9.67□□□□□ -0.86
C3orf49-203ENST00000616659 ZBBXA8MT70 800 aa9.66□□□□□ -0.86
C3orf49-203ENST00000616659 ESPNB1AK53 854 aa9.66□□□□□ -0.86
C3orf49-203ENST00000616659 FBXO45P0C2W1 286 aa9.66□□□□□ -0.86
C3orf49-203ENST00000616659 Q6ZVU0 165 aa9.66□□□□□ -0.86
C3orf49-203ENST00000616659 SNRKQ9NRH2 765 aa9.66□□□□□ -0.86
C3orf49-203ENST00000616659 PGPEP1Q9NXJ5 209 aa9.66□□□□□ -0.86
C3orf49-203ENST00000616659 DHX9Q08211 1270 aaKnown RBP9.65□□□□□ -0.86
C3orf49-203ENST00000616659 C6orf118Q5T5N4 469 aa9.65□□□□□ -0.86
C3orf49-203ENST00000616659 CBLBQ13191 982 aa9.64□□□□□ -0.87
C3orf49-203ENST00000616659 DZIP3Q86Y13 1208 aaKnown RBP9.64□□□□□ -0.87
C3orf49-203ENST00000616659 NXF1Q9UBU9 619 aaKnown RBP9.64□□□□□ -0.87
C3orf49-203ENST00000616659 SOBPA7XYQ1 873 aa9.63□□□□□ -0.87
C3orf49-203ENST00000616659 BMP2P12643 396 aa9.63□□□□□ -0.87
C3orf49-203ENST00000616659 TSEN34Q9BSV6 310 aaKnown RBP9.63□□□□□ -0.87
C3orf49-203ENST00000616659 NDUFB9Q9Y6M9 179 aa9.63□□□□□ -0.87
C3orf49-203ENST00000616659 SOS2Q07890 1332 aaPredicted RBP9.62□□□□□ -0.87
C3orf49-203ENST00000616659 UPP2O95045 317 aa9.62□□□□□ -0.87
C3orf49-203ENST00000616659 NPAS3Q8IXF0 933 aa9.62□□□□□ -0.87
C3orf49-203ENST00000616659 SEPT12Q8IYM1 358 aa9.61□□□□□ -0.87
C3orf49-203ENST00000616659 TMPRSS4Q9NRS4 437 aa9.61□□□□□ -0.87
C3orf49-203ENST00000616659 ERVH48-1M5A8F1 160 aa9.6□□□□□ -0.87
C3orf49-203ENST00000616659 NR1H3Q13133 447 aa9.6□□□□□ -0.87
C3orf49-203ENST00000616659 ZNF784Q8NCA9 323 aaPredicted RBP9.6□□□□□ -0.87
C3orf49-203ENST00000616659 H3BM21 787 aa9.59□□□□□ -0.87
C3orf49-203ENST00000616659 APBB1O00213 710 aa9.59□□□□□ -0.87
C3orf49-203ENST00000616659 SPINT1O43278 529 aa9.59□□□□□ -0.87
C3orf49-203ENST00000616659 WIPF1O43516 503 aa9.59□□□□□ -0.87
C3orf49-203ENST00000616659 LILRA1O75019 489 aa9.59□□□□□ -0.87
C3orf49-203ENST00000616659 RAB15P59190 212 aa9.59□□□□□ -0.87
C3orf49-203ENST00000616659 DNMT3LQ9UJW3 386 aa9.59□□□□□ -0.87
C3orf49-203ENST00000616659 PCDHB9Q9Y5E1 797 aa9.59□□□□□ -0.87
C3orf49-203ENST00000616659 MAN1A2O60476 641 aa9.57□□□□□ -0.88
C3orf49-203ENST00000616659 VEGFBP49765 207 aa9.57□□□□□ -0.88
C3orf49-203ENST00000616659 GIGYF1O75420 1035 aaPredicted RBP9.56□□□□□ -0.88
C3orf49-203ENST00000616659 ADD1P35611 737 aaKnown RBP9.56□□□□□ -0.88
C3orf49-203ENST00000616659 AGBL1Q96MI9 1066 aa9.56□□□□□ -0.88
C3orf49-203ENST00000616659 TBC1D2BQ9UPU7 963 aa9.56□□□□□ -0.88
C3orf49-203ENST00000616659 TTLL8A6PVC2 850 aa9.55□□□□□ -0.88
C3orf49-203ENST00000616659 ADH1AP07327 375 aa9.55□□□□□ -0.88
C3orf49-203ENST00000616659 KDF1Q8NAX2 398 aaPredicted RBP9.55□□□□□ -0.88
C3orf49-203ENST00000616659 SLC16A10Q8TF71 515 aa9.55□□□□□ -0.88
C3orf49-203ENST00000616659 RELBQ01201 579 aa9.54□□□□□ -0.88
C3orf49-203ENST00000616659 ERBB4Q15303 1308 aa9.54□□□□□ -0.88
C3orf49-203ENST00000616659 MCCD1P59942 119 aaPredicted RBP9.53□□□□□ -0.88
C3orf49-203ENST00000616659 VSIG8P0DPA2 414 aa9.52□□□□□ -0.89
C3orf49-203ENST00000616659 CTSOP43234 321 aaPredicted RBP9.52□□□□□ -0.89
C3orf49-203ENST00000616659 IRF5Q13568 498 aa9.52□□□□□ -0.89
C3orf49-203ENST00000616659 IRF7Q92985 503 aa9.52□□□□□ -0.89
C3orf49-203ENST00000616659 CYLDQ9NQC7 956 aa9.52□□□□□ -0.89
C3orf49-203ENST00000616659 MCM6Q14566 821 aa9.51□□□□□ -0.89
C3orf49-203ENST00000616659 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.51□□□□□ -0.89
C3orf49-203ENST00000616659 CCDC125Q86Z20 511 aa9.51□□□□□ -0.89
C3orf49-203ENST00000616659 ZNF592Q92610 1267 aa9.51□□□□□ -0.89
C3orf49-203ENST00000616659 INSM2Q96T92 566 aaPredicted RBP9.51□□□□□ -0.89
C3orf49-203ENST00000616659 GMPRP36959 345 aa9.5□□□□□ -0.89
C3orf49-203ENST00000616659 ERVK-9P63128 1117 aa9.5□□□□□ -0.89
C3orf49-203ENST00000616659 ZNF330Q9Y3S2 320 aaPredicted RBP9.5□□□□□ -0.89
C3orf49-203ENST00000616659 PPFIA3O75145 1194 aa9.49□□□□□ -0.89
C3orf49-203ENST00000616659 PTGIRP43119 386 aa9.49□□□□□ -0.89
C3orf49-203ENST00000616659 RNF20Q5VTR2 975 aa9.49□□□□□ -0.89
C3orf49-203ENST00000616659 FOXD4L5Q5VV16 416 aaPredicted RBP9.49□□□□□ -0.89
C3orf49-203ENST00000616659 RNF217Q8TC41 542 aa9.49□□□□□ -0.89
C3orf49-203ENST00000616659 ZNF395Q9H8N7 513 aaPredicted RBP9.49□□□□□ -0.89
C3orf49-203ENST00000616659 FIGNL2A6NMB9 653 aa9.48□□□□□ -0.89
C3orf49-203ENST00000616659 PTSQ03393 145 aa9.48□□□□□ -0.89
C3orf49-203ENST00000616659 SCTRP47872 440 aa9.47□□□□□ -0.89
C3orf49-203ENST00000616659 POLMQ9NP87 494 aaPredicted RBP9.47□□□□□ -0.89
C3orf49-203ENST00000616659 INSM1Q01101 510 aaPredicted RBP9.46□□□□□ -0.9
C3orf49-203ENST00000616659 CC2D2BQ6DHV5 1058 aa9.46□□□□□ -0.9
C3orf49-203ENST00000616659 TRIM52Q96A61 297 aa9.46□□□□□ -0.9
C3orf49-203ENST00000616659 GDPD2Q9HCC8 539 aa9.46□□□□□ -0.9
C3orf49-203ENST00000616659 PRM3Q9NNZ6 103 aa9.46□□□□□ -0.9
C3orf49-203ENST00000616659 TRAK2O60296 914 aa9.45□□□□□ -0.9
C3orf49-203ENST00000616659 LORP23490 312 aaPredicted RBP9.45□□□□□ -0.9
C3orf49-203ENST00000616659 CEP126Q9P2H0 1117 aa9.45□□□□□ -0.9
C3orf49-203ENST00000616659 PCDHB11Q9Y5F2 797 aa9.45□□□□□ -0.9
C3orf49-203ENST00000616659 SLC35F4A4IF30 521 aa9.44□□□□□ -0.9
C3orf49-203ENST00000616659 ATP5J2-PTCD1G3V325 749 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms