RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 GPSM3Q9Y4H4 160 aa7.8□□□□□ -1.16
RFC3-203ENST00000616236 ICMTO60725 284 aa7.79□□□□□ -1.16
RFC3-203ENST00000616236 DKK1O94907 266 aa7.79□□□□□ -1.16
RFC3-203ENST00000616236 HOXB1P14653 301 aaPredicted RBP7.79□□□□□ -1.16
RFC3-203ENST00000616236 ATP1A2P50993 1020 aa7.79□□□□□ -1.16
RFC3-203ENST00000616236 PTPRNQ16849 979 aa7.79□□□□□ -1.16
RFC3-203ENST00000616236 LARGE2Q8N3Y3 721 aa7.79□□□□□ -1.16
RFC3-203ENST00000616236 SREK1Q8WXA9 508 aaKnown RBP7.79□□□□□ -1.16
RFC3-203ENST00000616236 SLC4A5Q9BY07 1137 aa7.79□□□□□ -1.16
RFC3-203ENST00000616236 CXXC1Q9P0U4 656 aaPredicted RBP7.79□□□□□ -1.16
RFC3-203ENST00000616236 KIAA1024Q9UPX6 916 aa7.79□□□□□ -1.16
RFC3-203ENST00000616236 ZBTB7BO15156 539 aaPredicted RBP7.78□□□□□ -1.16
RFC3-203ENST00000616236 JUNDP17535 347 aa7.78□□□□□ -1.16
RFC3-203ENST00000616236 MAPK1P28482 360 aa7.78□□□□□ -1.16
RFC3-203ENST00000616236 OCLNQ16625 522 aa7.78□□□□□ -1.16
RFC3-203ENST00000616236 PDXDC2PQ6P474 469 aa7.78□□□□□ -1.16
RFC3-203ENST00000616236 BRICD5Q6PL45 260 aa7.78□□□□□ -1.16
RFC3-203ENST00000616236 GLYCTKQ8IVS8 523 aa7.78□□□□□ -1.16
RFC3-203ENST00000616236 SIX5Q8N196 739 aa7.77□□□□□ -1.17
RFC3-203ENST00000616236 RECKO95980 971 aa7.76□□□□□ -1.17
RFC3-203ENST00000616236 SEC13P55735 322 aa7.76□□□□□ -1.17
RFC3-203ENST00000616236 DMRTA1Q5VZB9 504 aa7.76□□□□□ -1.17
RFC3-203ENST00000616236 LAPTM4BQ86VI4 370 aa7.76□□□□□ -1.17
RFC3-203ENST00000616236 CCDC125Q86Z20 511 aa7.76□□□□□ -1.17
RFC3-203ENST00000616236 ADAM32Q8TC27 787 aa7.76□□□□□ -1.17
RFC3-203ENST00000616236 ASB16Q96NS5 453 aa7.76□□□□□ -1.17
RFC3-203ENST00000616236 SALL2Q9Y467 1007 aaPredicted RBP7.76□□□□□ -1.17
RFC3-203ENST00000616236 SFI1A8K8P3 1242 aa7.75□□□□□ -1.17
RFC3-203ENST00000616236 ARHGAP33O14559 1287 aa7.75□□□□□ -1.17
RFC3-203ENST00000616236 ZC3H6P61129 1189 aaKnown RBP7.75□□□□□ -1.17
RFC3-203ENST00000616236 GTF2IP78347 998 aa7.75□□□□□ -1.17
RFC3-203ENST00000616236 ARMC2Q8NEN0 867 aa7.75□□□□□ -1.17
RFC3-203ENST00000616236 GPKOWQ92917 476 aaPredicted RBP eCLIP7.75□□□□□ -1.17
RFC3-203ENST00000616236 CCDC85AQ96PX6 553 aaPredicted RBP7.75□□□□□ -1.17
RFC3-203ENST00000616236 DCTN4Q9UJW0 460 aa7.75□□□□□ -1.17
RFC3-203ENST00000616236 DOLKQ9UPQ8 538 aa7.75□□□□□ -1.17
RFC3-203ENST00000616236 RBM19Q9Y4C8 960 aaKnown RBP7.75□□□□□ -1.17
RFC3-203ENST00000616236 C21orf2O43822 256 aa7.74□□□□□ -1.17
RFC3-203ENST00000616236 LGR5O75473 907 aa7.74□□□□□ -1.17
RFC3-203ENST00000616236 FMNL1O95466 1100 aaPredicted RBP7.74□□□□□ -1.17
RFC3-203ENST00000616236 ECM1Q16610 540 aa7.74□□□□□ -1.17
RFC3-203ENST00000616236 OXLD1Q5BKU9 147 aa7.74□□□□□ -1.17
RFC3-203ENST00000616236 CCDC102BQ68D86 513 aa7.74□□□□□ -1.17
RFC3-203ENST00000616236 GTF3C2Q8WUA4 911 aaPredicted RBP7.74□□□□□ -1.17
RFC3-203ENST00000616236 THAP11Q96EK4 314 aa7.74□□□□□ -1.17
RFC3-203ENST00000616236 ZFRQ96KR1 1074 aaKnown RBP7.74□□□□□ -1.17
RFC3-203ENST00000616236 SEPT3Q9UH03 358 aa7.74□□□□□ -1.17
RFC3-203ENST00000616236 VPS9D1Q9Y2B5 631 aa7.74□□□□□ -1.17
RFC3-203ENST00000616236 CCNYL3P0C7X3 344 aa7.73□□□□□ -1.17
RFC3-203ENST00000616236 TSNAXIP1Q2TAA8 658 aa7.73□□□□□ -1.17
RFC3-203ENST00000616236 NAALADL2Q58DX5 795 aa7.73□□□□□ -1.17
RFC3-203ENST00000616236 POTEEQ6S8J3 1075 aa7.73□□□□□ -1.17
RFC3-203ENST00000616236 ZSCAN29Q8IWY8 852 aaPredicted RBP7.73□□□□□ -1.17
RFC3-203ENST00000616236 SCUBE3Q8IX30 993 aa7.73□□□□□ -1.17
RFC3-203ENST00000616236 ARHGAP9Q9BRR9 750 aa7.73□□□□□ -1.17
RFC3-203ENST00000616236 EVA1BQ9NVM1 165 aa7.73□□□□□ -1.17
RFC3-203ENST00000616236 AXIN2Q9Y2T1 843 aa7.73□□□□□ -1.17
RFC3-203ENST00000616236 DNMT3AQ9Y6K1 912 aaPredicted RBP7.73□□□□□ -1.17
RFC3-203ENST00000616236 NBPF14Q5TI25 921 aa7.72□□□□□ -1.17
RFC3-203ENST00000616236 ZBTB33Q86T24 672 aa7.72□□□□□ -1.17
RFC3-203ENST00000616236 TPCN2Q8NHX9 752 aa7.72□□□□□ -1.17
RFC3-203ENST00000616236 HINFPQ9BQA5 517 aa7.72□□□□□ -1.17
RFC3-203ENST00000616236 PRR14Q9BWN1 585 aa7.72□□□□□ -1.17
RFC3-203ENST00000616236 PPP1R1BQ9UD71 204 aaPredicted RBP7.72□□□□□ -1.17
RFC3-203ENST00000616236 ARHGAP4P98171 946 aa7.71□□□□□ -1.18
RFC3-203ENST00000616236 FKBP4Q02790 459 aaKnown RBP eCLIP7.71□□□□□ -1.18
RFC3-203ENST00000616236 MTMR3Q13615 1198 aa7.71□□□□□ -1.18
RFC3-203ENST00000616236 EAPPQ56P03 285 aaPredicted RBP7.71□□□□□ -1.18
RFC3-203ENST00000616236 DZIP3Q86Y13 1208 aaKnown RBP7.71□□□□□ -1.18
RFC3-203ENST00000616236 MKNK1Q9BUB5 465 aa7.71□□□□□ -1.18
RFC3-203ENST00000616236 NBPF3Q9H094 633 aa7.71□□□□□ -1.18
RFC3-203ENST00000616236 PSME1Q06323 249 aa7.7□□□□□ -1.18
RFC3-203ENST00000616236 SF3B2Q13435 895 aaKnown RBP7.7□□□□□ -1.18
RFC3-203ENST00000616236 COL19A1Q14993 1142 aa7.7□□□□□ -1.18
RFC3-203ENST00000616236 CAPN12Q6ZSI9 719 aa7.7□□□□□ -1.18
RFC3-203ENST00000616236 LRCH3Q96II8 777 aa7.7□□□□□ -1.18
RFC3-203ENST00000616236 NUDT12Q9BQG2 462 aa7.7□□□□□ -1.18
RFC3-203ENST00000616236 PCDHGA11Q9Y5H2 935 aa7.7□□□□□ -1.18
RFC3-203ENST00000616236 BHMG1C9JSJ3 638 aaPredicted RBP7.69□□□□□ -1.18
RFC3-203ENST00000616236 POTEB2H3BUK9 544 aa7.69□□□□□ -1.18
RFC3-203ENST00000616236 SNPHO15079 494 aa7.69□□□□□ -1.18
RFC3-203ENST00000616236 GIGYF1O75420 1035 aaPredicted RBP7.69□□□□□ -1.18
RFC3-203ENST00000616236 NR1I2O75469 434 aa7.69□□□□□ -1.18
RFC3-203ENST00000616236 RGL4Q8IZJ4 473 aa7.69□□□□□ -1.18
RFC3-203ENST00000616236 BACH2Q9BYV9 841 aa7.69□□□□□ -1.18
RFC3-203ENST00000616236 BCL11AQ9H165 835 aa7.69□□□□□ -1.18
RFC3-203ENST00000616236 SCUBE2Q9NQ36 999 aa7.69□□□□□ -1.18
RFC3-203ENST00000616236 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.69□□□□□ -1.18
RFC3-203ENST00000616236 SMARCA5O60264 1052 aaPredicted RBP7.68□□□□□ -1.18
RFC3-203ENST00000616236 DXOO77932 396 aaKnown RBP7.68□□□□□ -1.18
RFC3-203ENST00000616236 ERCC5P28715 1186 aaPredicted RBP7.68□□□□□ -1.18
RFC3-203ENST00000616236 SH3BP5LQ7L8J4 393 aa7.68□□□□□ -1.18
RFC3-203ENST00000616236 UBXN4Q92575 508 aa7.68□□□□□ -1.18
RFC3-203ENST00000616236 WEE1P30291 646 aa7.67□□□□□ -1.18
RFC3-203ENST00000616236 FKBP5Q13451 457 aaPredicted RBP7.67□□□□□ -1.18
RFC3-203ENST00000616236 SF3A1Q15459 793 aaKnown RBP7.67□□□□□ -1.18
RFC3-203ENST00000616236 OTUD5Q96G74 571 aa7.67□□□□□ -1.18
RFC3-203ENST00000616236 PURBQ96QR8 312 aaKnown RBP7.67□□□□□ -1.18
RFC3-203ENST00000616236 CARD14Q9BXL6 1004 aa7.67□□□□□ -1.18
RFC3-203ENST00000616236 PCDHB3Q9Y5E6 796 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms