RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 POGZQ7Z3K3 1410 aa5.43□□□□□ -1.54
CHD9-221ENST00000615216 CCDC158Q5M9N0 1113 aa5.43□□□□□ -1.54
CHD9-221ENST00000615216 HMGB2P26583 209 aaKnown RBP5.43□□□□□ -1.54
CHD9-221ENST00000615216 TCP11L2Q8N4U5 519 aa5.43□□□□□ -1.54
CHD9-221ENST00000615216 NOB1Q9ULX3 412 aaKnown RBP5.43□□□□□ -1.54
CHD9-221ENST00000615216 PATL2C9JE40 543 aaKnown RBP5.43□□□□□ -1.54
CHD9-221ENST00000615216 ZRSR2Q15696 482 aaKnown RBP5.43□□□□□ -1.54
CHD9-221ENST00000615216 TWISTNBQ3B726 338 aaPredicted RBP5.43□□□□□ -1.54
CHD9-221ENST00000615216 GOLGA6L10A6NI86 522 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 K7ELQ4 463 aaPredicted RBP5.42□□□□□ -1.54
CHD9-221ENST00000615216 TRIM22Q8IYM9 498 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 ZNF692Q9BU19 519 aaPredicted RBP5.42□□□□□ -1.54
CHD9-221ENST00000615216 NACAP1Q9BZK3 213 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.42□□□□□ -1.546e-7■■■■■ 88.2
CHD9-221ENST00000615216 AKNAQ7Z591 1439 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 LEKR1Q6ZMV7 388 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 CCAR1Q8IX12 1150 aaKnown RBP5.42□□□□□ -1.54
CHD9-221ENST00000615216 ZNF644Q9H582 1327 aaPredicted RBP5.42□□□□□ -1.54
CHD9-221ENST00000615216 STK38Q15208 465 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 NLRP2Q9NX02 1062 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 PDZRN3Q9UPQ7 1066 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 NKTRP30414 1462 aaKnown RBP5.42□□□□□ -1.54
CHD9-221ENST00000615216 SYCP1Q15431 976 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 ZSCAN31Q96LW9 406 aaPredicted RBP5.42□□□□□ -1.54
CHD9-221ENST00000615216 SURF6O75683 361 aaKnown RBP5.42□□□□□ -1.54
CHD9-221ENST00000615216 WWC2Q6AWC2 1192 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 RTEL1-TNFRSF6BF6WH68 1400 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 PRKAR2BP31323 418 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 NEK4P51957 841 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 KRT32Q14532 448 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 ABTB2Q8N961 1025 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 CNKSR2Q8WXI2 1034 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 TNMDQ9H2S6 317 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 GGNBP2Q9H3C7 697 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 FAM69CQ0P6D2 419 aa5.42□□□□□ -1.54
CHD9-221ENST00000615216 AIMP1Q12904 312 aaKnown RBP5.42□□□□□ -1.54
CHD9-221ENST00000615216 MVPQ14764 893 aaKnown RBP5.42□□□□□ -1.54
CHD9-221ENST00000615216 ABCC11Q96J66 1382 aa5.41□□□□□ -1.54
CHD9-221ENST00000615216 ABCA10Q8WWZ4 1543 aa5.41□□□□□ -1.54
CHD9-221ENST00000615216 PPFIBP1Q86W92 1011 aa5.41□□□□□ -1.54
CHD9-221ENST00000615216 WASF1Q92558 559 aa5.41□□□□□ -1.54
CHD9-221ENST00000615216 KRT85P78386 507 aa5.41□□□□□ -1.54
CHD9-221ENST00000615216 AEBP2Q6ZN18 517 aaPredicted RBP5.41□□□□□ -1.54
CHD9-221ENST00000615216 ANKRD18AQ8IVF6 992 aa5.41□□□□□ -1.54
CHD9-221ENST00000615216 DNAJC2Q99543 621 aaKnown RBP5.41□□□□□ -1.54
CHD9-221ENST00000615216 CFAP45Q9UL16 551 aa5.41□□□□□ -1.54
CHD9-221ENST00000615216 CDK13Q14004 1512 aaKnown RBP5.41□□□□□ -1.54
CHD9-221ENST00000615216 EIF3JO75822 258 aaKnown RBP5.41□□□□□ -1.54
CHD9-221ENST00000615216 NLRP6P59044 892 aa5.41□□□□□ -1.54
CHD9-221ENST00000615216 NOL7Q9UMY1 257 aaKnown RBP5.41□□□□□ -1.54
CHD9-221ENST00000615216 FYB1O15117 783 aa5.41□□□□□ -1.54
CHD9-221ENST00000615216 ERLIN1O75477 346 aa5.41□□□□□ -1.54
CHD9-221ENST00000615216 TATP17735 454 aaPredicted RBP5.41□□□□□ -1.54
CHD9-221ENST00000615216 SLC52A1Q9NWF4 448 aa5.41□□□□□ -1.54
CHD9-221ENST00000615216 SPG7Q9UQ90 795 aa5.41□□□□□ -1.54
CHD9-221ENST00000615216 CCDC69A6NI79 296 aa5.41□□□□□ -1.54
CHD9-221ENST00000615216 CTNNA3Q9UI47 895 aa5.41□□□□□ -1.54
CHD9-221ENST00000615216 MAGI1Q96QZ7 1491 aaPredicted RBP5.41□□□□□ -1.54
CHD9-221ENST00000615216 H0YHG0 523 aa5.4□□□□□ -1.54
CHD9-221ENST00000615216 RAPGEF6Q8TEU7 1601 aa5.4□□□□□ -1.54
CHD9-221ENST00000615216 CHD1LQ86WJ1 897 aa5.4□□□□□ -1.54
CHD9-221ENST00000615216 PRPF40AO75400 957 aaKnown RBP5.4□□□□□ -1.54
CHD9-221ENST00000615216 KRT18P05783 430 aaKnown RBP5.4□□□□□ -1.54
CHD9-221ENST00000615216 ADGBQ8N7X0 1667 aa5.4□□□□□ -1.54
CHD9-221ENST00000615216 ATF7IPQ6VMQ6 1270 aa5.4□□□□□ -1.54
CHD9-221ENST00000615216 NSD3Q9BZ95 1437 aa5.4□□□□□ -1.55
CHD9-221ENST00000615216 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.4□□□□□ -1.55
CHD9-221ENST00000615216 PRAM1Q96QH2 718 aa5.4□□□□□ -1.55
CHD9-221ENST00000615216 CDK19Q9BWU1 502 aa5.4□□□□□ -1.55
CHD9-221ENST00000615216 CNNM1Q9NRU3 951 aa5.4□□□□□ -1.55
CHD9-221ENST00000615216 KIAA0586Q9BVV6 1533 aa5.4□□□□□ -1.55
CHD9-221ENST00000615216 EXOSC9Q06265 439 aaKnown RBP5.4□□□□□ -1.55
CHD9-221ENST00000615216 CEP131Q9UPN4 1083 aa5.4□□□□□ -1.55
CHD9-221ENST00000615216 KIF2AO00139 706 aaPredicted RBP5.4□□□□□ -1.55
CHD9-221ENST00000615216 SERPINC1P01008 464 aa5.4□□□□□ -1.55
CHD9-221ENST00000615216 CCDC57Q2TAC2 916 aa5.4□□□□□ -1.55
CHD9-221ENST00000615216 PPP6R1Q9UPN7 881 aa5.4□□□□□ -1.55
CHD9-221ENST00000615216 IKQ13123 557 aaPredicted RBP5.4□□□□□ -1.55
CHD9-221ENST00000615216 HDGFL1Q5TGJ6 251 aa5.4□□□□□ -1.55
CHD9-221ENST00000615216 IL27Q8NEV9 243 aa5.4□□□□□ -1.55
CHD9-221ENST00000615216 NSD2O96028 1365 aa5.39□□□□□ -1.55
CHD9-221ENST00000615216 SMTNL1A8MU46 457 aa5.39□□□□□ -1.55
CHD9-221ENST00000615216 BACH2Q9BYV9 841 aa5.39□□□□□ -1.55
CHD9-221ENST00000615216 GOLGA6L7A0A1B0GV03 622 aa5.39□□□□□ -1.55
CHD9-221ENST00000615216 FIBPO43427 364 aa5.39□□□□□ -1.55
CHD9-221ENST00000615216 RAB11FIP3O75154 756 aa5.39□□□□□ -1.55
CHD9-221ENST00000615216 TAF3Q5VWG9 929 aa5.39□□□□□ -1.55
CHD9-221ENST00000615216 ZFYVE27Q5T4F4 411 aa5.39□□□□□ -1.55
CHD9-221ENST00000615216 KIAA0754O94854 1291 aa5.39□□□□□ -1.55
CHD9-221ENST00000615216 CEP57L1Q8IYX8 460 aa5.39□□□□□ -1.55
CHD9-221ENST00000615216 DHX29Q7Z478 1369 aaKnown RBP5.39□□□□□ -1.55
CHD9-221ENST00000615216 ME1P48163 572 aa5.39□□□□□ -1.55
CHD9-221ENST00000615216 GRPEL1Q9HAV7 217 aa5.39□□□□□ -1.55
CHD9-221ENST00000615216 FCHSD2O94868 740 aa5.39□□□□□ -1.55
CHD9-221ENST00000615216 CYB5RLQ6IPT4 315 aa5.39□□□□□ -1.55
CHD9-221ENST00000615216 SLC4A2P04920 1241 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 CABP4P57796 275 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 RNF214Q8ND24 703 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 CCDC112Q8NEF3 446 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 TMEM132AQ24JP5 1023 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms