RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 CLSPNQ9HAW4 1339 aa32.02■■■□□ 2.72
FAM228B-208ENST00000613899 SLC12A5Q9H2X9 1139 aa32.02■■■□□ 2.72
FAM228B-208ENST00000613899 SOX12O15370 315 aa32.01■■■□□ 2.71
FAM228B-208ENST00000613899 PDE3BQ13370 1112 aa32.01■■■□□ 2.71
FAM228B-208ENST00000613899 FAM196AQ6ZSG2 479 aa32.01■■■□□ 2.71
FAM228B-208ENST00000613899 A0A1W2PP64 1363 aa32.01■■■□□ 2.71
FAM228B-208ENST00000613899 RGPD5Q99666 1765 aa32■■■□□ 2.71
FAM228B-208ENST00000613899 USP47Q96K76 1375 aa31.99■■■□□ 2.71
FAM228B-208ENST00000613899 DISP2A7MBM2 1401 aa31.99■■■□□ 2.71
FAM228B-208ENST00000613899 WDR17Q8IZU2 1322 aa31.99■■■□□ 2.71
FAM228B-208ENST00000613899 WNK3Q9BYP7 1800 aa31.98■■■□□ 2.71
FAM228B-208ENST00000613899 TOM1L2Q6ZVM7 507 aa31.98■■■□□ 2.71
FAM228B-208ENST00000613899 TIMELESSQ9UNS1 1208 aa31.98■■■□□ 2.71
FAM228B-208ENST00000613899 AXIN2Q9Y2T1 843 aa31.97■■■□□ 2.71
FAM228B-208ENST00000613899 NME9Q86XW9 330 aa31.96■■■□□ 2.71
FAM228B-208ENST00000613899 LRRC37A3O60309 1634 aa31.95■■■□□ 2.71
FAM228B-208ENST00000613899 PCGF6Q9BYE7 350 aa31.94■■■□□ 2.7
FAM228B-208ENST00000613899 LTN1O94822 1766 aa31.94■■■□□ 2.7
FAM228B-208ENST00000613899 OVOS2A0A0J9YW53 1432 aa31.91■■■□□ 2.7
FAM228B-208ENST00000613899 OVOS2Q6IE36 1432 aa31.91■■■□□ 2.7
FAM228B-208ENST00000613899 TRIM37O94972 964 aa31.9■■■□□ 2.7
FAM228B-208ENST00000613899 CSB-PGBD3P0DP91 1061 aa31.9■■■□□ 2.7
FAM228B-208ENST00000613899 TMF1P82094 1093 aa31.9■■■□□ 2.7
FAM228B-208ENST00000613899 C11orf95C9JLR9 678 aaPredicted RBP31.89■■■□□ 2.7
FAM228B-208ENST00000613899 EN1Q05925 392 aaPredicted RBP31.89■■■□□ 2.7
FAM228B-208ENST00000613899 CDCA7Q9BWT1 371 aaPredicted RBP31.88■■■□□ 2.69
FAM228B-208ENST00000613899 OVOS2A0A0G2JMS6 1433 aa31.87■■■□□ 2.69
FAM228B-208ENST00000613899 CARD10Q9BWT7 1032 aa31.87■■■□□ 2.69
FAM228B-208ENST00000613899 ANKRD36BQ8N2N9 1353 aa31.86■■■□□ 2.69
FAM228B-208ENST00000613899 PEAK1Q9H792 1746 aa31.86■■■□□ 2.69
FAM228B-208ENST00000613899 DDB1Q16531 1140 aa31.85■■■□□ 2.69
FAM228B-208ENST00000613899 PARD3Q8TEW0 1356 aa31.84■■■□□ 2.69
FAM228B-208ENST00000613899 CCDC7Q96M83 1385 aa31.84■■■□□ 2.69
FAM228B-208ENST00000613899 ERBB3P21860 1342 aa31.82■■■□□ 2.68
FAM228B-208ENST00000613899 SRCAPQ6ZRS2 3230 aa31.82■■■□□ 2.68
FAM228B-208ENST00000613899 APBA3O96018 575 aa31.82■■■□□ 2.68
FAM228B-208ENST00000613899 CDCA8Q53HL2 280 aa31.82■■■□□ 2.68
FAM228B-208ENST00000613899 EZH2Q15910 746 aaKnown RBP31.79■■■□□ 2.68
FAM228B-208ENST00000613899 CAMKK2Q96RR4 588 aa31.79■■■□□ 2.68
FAM228B-208ENST00000613899 RREB1Q92766 1687 aa31.79■■■□□ 2.68
FAM228B-208ENST00000613899 SBF2Q86WG5 1849 aa31.78■■■□□ 2.68
FAM228B-208ENST00000613899 COG3Q96JB2 828 aa31.78■■■□□ 2.68
FAM228B-208ENST00000613899 FAM208AQ9UK61 1670 aaKnown RBP31.75■■■□□ 2.67
FAM228B-208ENST00000613899 TNS2Q63HR2 1409 aa31.74■■■□□ 2.67
FAM228B-208ENST00000613899 LRP5O75197 1615 aa31.73■■■□□ 2.67
FAM228B-208ENST00000613899 RGPD3A6NKT7 1758 aaPredicted RBP31.73■■■□□ 2.67
FAM228B-208ENST00000613899 RGPD4Q7Z3J3 1758 aa31.73■■■□□ 2.67
FAM228B-208ENST00000613899 BCL9O00512 1426 aa31.73■■■□□ 2.67
FAM228B-208ENST00000613899 MYOM1P52179 1685 aa31.73■■■□□ 2.67
FAM228B-208ENST00000613899 NUP188Q5SRE5 1749 aa31.72■■■□□ 2.67
FAM228B-208ENST00000613899 PSDA5PKW4 1024 aaPredicted RBP31.72■■■□□ 2.67
FAM228B-208ENST00000613899 ANKRD24Q8TF21 1146 aa31.72■■■□□ 2.67
FAM228B-208ENST00000613899 NLRP2Q9NX02 1062 aa31.72■■■□□ 2.67
FAM228B-208ENST00000613899 KIF20BQ96Q89 1820 aa31.7■■■□□ 2.67
FAM228B-208ENST00000613899 EXOC5O00471 708 aa31.7■■■□□ 2.67
FAM228B-208ENST00000613899 CCER1Q8TC90 406 aaPredicted RBP31.7■■■□□ 2.67
FAM228B-208ENST00000613899 MARCH10Q8NA82 808 aaPredicted RBP31.69■■■□□ 2.66
FAM228B-208ENST00000613899 IP6K1Q92551 441 aa31.69■■■□□ 2.66
FAM228B-208ENST00000613899 R3HDM1Q15032 1099 aaKnown RBP31.66■■■□□ 2.66
FAM228B-208ENST00000613899 MAP3K19Q56UN5 1328 aa31.66■■■□□ 2.66
FAM228B-208ENST00000613899 IL2RBP14784 551 aa31.65■■■□□ 2.66
FAM228B-208ENST00000613899 RTL1A6NKG5 1358 aa31.65■■■□□ 2.66
FAM228B-208ENST00000613899 FYB1O15117 783 aa31.64■■■□□ 2.66
FAM228B-208ENST00000613899 BCL11BQ9C0K0 894 aaPredicted RBP31.64■■■□□ 2.66
FAM228B-208ENST00000613899 AMPHP49418 695 aa31.63■■■□□ 2.65
FAM228B-208ENST00000613899 HOXC9P31274 260 aa31.61■■■□□ 2.65
FAM228B-208ENST00000613899 GGNBP2Q9H3C7 697 aa31.61■■■□□ 2.65
FAM228B-208ENST00000613899 PLSCR1O15162 318 aa31.6■■■□□ 2.65
FAM228B-208ENST00000613899 NBPF14Q5TI25 921 aa31.6■■■□□ 2.65
FAM228B-208ENST00000613899 NHSQ6T4R5 1651 aa31.58■■■□□ 2.65
FAM228B-208ENST00000613899 LTV1Q96GA3 475 aaPredicted RBP31.58■■■□□ 2.65
FAM228B-208ENST00000613899 NSD3Q9BZ95 1437 aa31.58■■■□□ 2.65
FAM228B-208ENST00000613899 FBLN1P23142 703 aa31.56■■■□□ 2.64
FAM228B-208ENST00000613899 RGPD2P0DJD1 1756 aa31.54■■■□□ 2.64
FAM228B-208ENST00000613899 EIF4G2P78344 907 aaKnown RBP eCLIP31.54■■■□□ 2.64
FAM228B-208ENST00000613899 RRS1Q15050 365 aaKnown RBP31.54■■■□□ 2.64
FAM228B-208ENST00000613899 PTF1AQ7RTS3 328 aa31.54■■■□□ 2.64
FAM228B-208ENST00000613899 SMG6Q86US8 1419 aaKnown RBP31.53■■■□□ 2.64
FAM228B-208ENST00000613899 CARD14Q9BXL6 1004 aa31.52■■■□□ 2.64
FAM228B-208ENST00000613899 KIF24Q5T7B8 1368 aa31.51■■■□□ 2.63
FAM228B-208ENST00000613899 FLT4P35916 1363 aa31.48■■■□□ 2.63
FAM228B-208ENST00000613899 HSPA5P11021 654 aaKnown RBP31.47■■■□□ 2.63
FAM228B-208ENST00000613899 POLR3GLQ9BT43 218 aa31.47■■■□□ 2.63
FAM228B-208ENST00000613899 CGNL1Q0VF96 1302 aa31.46■■■□□ 2.63
FAM228B-208ENST00000613899 INSRP06213 1382 aa31.45■■■□□ 2.63
FAM228B-208ENST00000613899 KCNQ2O43526 872 aa31.45■■■□□ 2.63
FAM228B-208ENST00000613899 ACSBG1Q96GR2 724 aa31.45■■■□□ 2.63
FAM228B-208ENST00000613899 BTAF1O14981 1849 aa31.45■■■□□ 2.62
FAM228B-208ENST00000613899 KAT6BQ8WYB5 2073 aa31.44■■■□□ 2.62
FAM228B-208ENST00000613899 MEGF6O75095 1541 aa31.44■■■□□ 2.62
FAM228B-208ENST00000613899 ANKRD26Q9UPS8 1709 aa31.44■■■□□ 2.62
FAM228B-208ENST00000613899 SHANK3Q9BYB0 1731 aa31.43■■■□□ 2.62
FAM228B-208ENST00000613899 TXNRD1Q16881 649 aa31.41■■■□□ 2.62
FAM228B-208ENST00000613899 PROM2Q8N271 834 aa31.41■■■□□ 2.62
FAM228B-208ENST00000613899 DDX54Q8TDD1 881 aaKnown RBP31.41■■■□□ 2.62
FAM228B-208ENST00000613899 HSP90AB2PQ58FF8 381 aa31.4■■■□□ 2.62
FAM228B-208ENST00000613899 NBPF6Q5VWK0 638 aa31.4■■■□□ 2.62
FAM228B-208ENST00000613899 NBPF4Q96M43 638 aa31.4■■■□□ 2.62
FAM228B-208ENST00000613899 ANO8Q9HCE9 1232 aaPredicted RBP31.4■■■□□ 2.62
FAM228B-208ENST00000613899 DOT1LQ8TEK3 1739 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms