RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 NLRP6P59044 892 aa11.32□□□□□ -0.6
PSMB3-208ENST00000613870 KRT27Q7Z3Y8 459 aa11.32□□□□□ -0.6
PSMB3-208ENST00000613870 GGNBP2Q9H3C7 697 aa11.32□□□□□ -0.6
PSMB3-208ENST00000613870 STRN4Q9NRL3 753 aa11.32□□□□□ -0.6
PSMB3-208ENST00000613870 LMO7Q8WWI1 1683 aa11.32□□□□□ -0.6
PSMB3-208ENST00000613870 SPATA31A1Q5TZJ5 1347 aa11.32□□□□□ -0.6
PSMB3-208ENST00000613870 TTC21BQ7Z4L5 1316 aa11.32□□□□□ -0.6
PSMB3-208ENST00000613870 SLIT3O75094 1523 aa11.31□□□□□ -0.6
PSMB3-208ENST00000613870 CCDC125Q86Z20 511 aa11.31□□□□□ -0.6
PSMB3-208ENST00000613870 THSD7AQ9UPZ6 1657 aa11.3□□□□□ -0.6
PSMB3-208ENST00000613870 MON2Q7Z3U7 1717 aa11.3□□□□□ -0.6
PSMB3-208ENST00000613870 EDC4Q6P2E9 1401 aaKnown RBP11.3□□□□□ -0.6
PSMB3-208ENST00000613870 A0A0G2JS52 829 aa11.3□□□□□ -0.6
PSMB3-208ENST00000613870 MYT1Q01538 1121 aa11.3□□□□□ -0.6
PSMB3-208ENST00000613870 CD163L1Q9NR16 1453 aa11.3□□□□□ -0.6
PSMB3-208ENST00000613870 NSD2O96028 1365 aa11.29□□□□□ -0.6
PSMB3-208ENST00000613870 PARD3Q8TEW0 1356 aa11.29□□□□□ -0.6
PSMB3-208ENST00000613870 NPC1L1Q9UHC9 1359 aa11.29□□□□□ -0.6
PSMB3-208ENST00000613870 EVA1CP58658 441 aa11.29□□□□□ -0.6
PSMB3-208ENST00000613870 LARP1Q6PKG0 1096 aaKnown RBP11.29□□□□□ -0.6
PSMB3-208ENST00000613870 NME9Q86XW9 330 aa11.29□□□□□ -0.6
PSMB3-208ENST00000613870 SRCAPQ6ZRS2 3230 aa11.29□□□□□ -0.6
PSMB3-208ENST00000613870 COL18A1P39060 1754 aa11.28□□□□□ -0.6
PSMB3-208ENST00000613870 BLMP54132 1417 aaPredicted RBP11.28□□□□□ -0.6
PSMB3-208ENST00000613870 FYB1O15117 783 aa11.28□□□□□ -0.6
PSMB3-208ENST00000613870 PPP2R1AP30153 589 aa11.28□□□□□ -0.6
PSMB3-208ENST00000613870 FAM182BQ5T319 152 aa11.28□□□□□ -0.6
PSMB3-208ENST00000613870 FAM9BQ8IZU0 186 aa11.28□□□□□ -0.6
PSMB3-208ENST00000613870 COG3Q96JB2 828 aa11.28□□□□□ -0.6
PSMB3-208ENST00000613870 USP35Q9P2H5 1018 aa11.28□□□□□ -0.6
PSMB3-208ENST00000613870 TTC21AQ8NDW8 1320 aa11.28□□□□□ -0.6
PSMB3-208ENST00000613870 ZBTB7CA1YPR0 619 aa11.27□□□□□ -0.61
PSMB3-208ENST00000613870 CCDC184Q52MB2 194 aa11.27□□□□□ -0.61
PSMB3-208ENST00000613870 ZRANB1Q9UGI0 708 aa11.27□□□□□ -0.61
PSMB3-208ENST00000613870 AATKQ6ZMQ8 1374 aa11.27□□□□□ -0.61
PSMB3-208ENST00000613870 COL5A2P05997 1499 aaPredicted RBP11.26□□□□□ -0.61
PSMB3-208ENST00000613870 RGPD5Q99666 1765 aa11.26□□□□□ -0.61
PSMB3-208ENST00000613870 SOX12O15370 315 aa11.26□□□□□ -0.61
PSMB3-208ENST00000613870 BARGINQ6ZT62 677 aa11.26□□□□□ -0.61
PSMB3-208ENST00000613870 DEFB132Q7Z7B7 95 aa11.26□□□□□ -0.61
PSMB3-208ENST00000613870 ARHGEF25Q86VW2 580 aa11.26□□□□□ -0.61
PSMB3-208ENST00000613870 AXIN2Q9Y2T1 843 aa11.26□□□□□ -0.61
PSMB3-208ENST00000613870 PPM1GO15355 546 aaPredicted RBP11.25□□□□□ -0.61
PSMB3-208ENST00000613870 KCNH5Q8NCM2 988 aa11.25□□□□□ -0.61
PSMB3-208ENST00000613870 CFAP53Q96M91 514 aa11.25□□□□□ -0.61
PSMB3-208ENST00000613870 USP31Q70CQ4 1352 aa11.25□□□□□ -0.61
PSMB3-208ENST00000613870 USP54Q70EL1 1684 aa11.24□□□□□ -0.61
PSMB3-208ENST00000613870 TCP11L2Q8N4U5 519 aa11.24□□□□□ -0.61
PSMB3-208ENST00000613870 CRB1P82279 1406 aa11.24□□□□□ -0.61
PSMB3-208ENST00000613870 NFAT5O94916 1531 aa11.24□□□□□ -0.61
PSMB3-208ENST00000613870 SF3B2Q13435 895 aaKnown RBP11.23□□□□□ -0.61
PSMB3-208ENST00000613870 WDR43Q15061 677 aaKnown RBP eCLIP11.23□□□□□ -0.61
PSMB3-208ENST00000613870 THRAP3Q9Y2W1 955 aaKnown RBP11.23□□□□□ -0.61
PSMB3-208ENST00000613870 KIF20BQ96Q89 1820 aa11.23□□□□□ -0.61
PSMB3-208ENST00000613870 RGPD1P0DJD0 1748 aa11.22□□□□□ -0.61
PSMB3-208ENST00000613870 MTHFSP49914 203 aa11.22□□□□□ -0.61
PSMB3-208ENST00000613870 PARP4Q9UKK3 1724 aaKnown RBP11.22□□□□□ -0.61
PSMB3-208ENST00000613870 WDR17Q8IZU2 1322 aa11.21□□□□□ -0.61
PSMB3-208ENST00000613870 TOM1L2Q6ZVM7 507 aa11.21□□□□□ -0.61
PSMB3-208ENST00000613870 LTN1O94822 1766 aa11.21□□□□□ -0.62
PSMB3-208ENST00000613870 TNS1Q9HBL0 1735 aaKnown RBP11.21□□□□□ -0.62
PSMB3-208ENST00000613870 PDE3BQ13370 1112 aa11.2□□□□□ -0.62
PSMB3-208ENST00000613870 FAM196AQ6ZSG2 479 aa11.2□□□□□ -0.62
PSMB3-208ENST00000613870 OVOS2A0A0J9YW53 1432 aa11.19□□□□□ -0.62
PSMB3-208ENST00000613870 OVOS2Q6IE36 1432 aa11.19□□□□□ -0.62
PSMB3-208ENST00000613870 WNK3Q9BYP7 1800 aa11.19□□□□□ -0.62
PSMB3-208ENST00000613870 TRIM37O94972 964 aa11.19□□□□□ -0.62
PSMB3-208ENST00000613870 FBLN1P23142 703 aa11.19□□□□□ -0.62
PSMB3-208ENST00000613870 BAG6P46379 1132 aa11.19□□□□□ -0.62
PSMB3-208ENST00000613870 EN1Q05925 392 aaPredicted RBP11.19□□□□□ -0.62
PSMB3-208ENST00000613870 PNISRQ8TF01 805 aaKnown RBP11.19□□□□□ -0.62
PSMB3-208ENST00000613870 LRRC37A3O60309 1634 aa11.18□□□□□ -0.62
PSMB3-208ENST00000613870 HNRNPUQ00839 825 aaKnown RBP eCLIP11.18□□□□□ -0.62
PSMB3-208ENST00000613870 RRS1Q15050 365 aaKnown RBP11.18□□□□□ -0.62
PSMB3-208ENST00000613870 CARD10Q9BWT7 1032 aa11.18□□□□□ -0.62
PSMB3-208ENST00000613870 NUDCQ9Y266 331 aa11.18□□□□□ -0.62
PSMB3-208ENST00000613870 ABCC6O95255 1503 aa11.18□□□□□ -0.62
PSMB3-208ENST00000613870 ANKRD26Q9UPS8 1709 aa11.18□□□□□ -0.62
PSMB3-208ENST00000613870 U2SURPO15042 1029 aaKnown RBP11.17□□□□□ -0.62
PSMB3-208ENST00000613870 CSB-PGBD3P0DP91 1061 aa11.17□□□□□ -0.62
PSMB3-208ENST00000613870 AMPHP49418 695 aa11.17□□□□□ -0.62
PSMB3-208ENST00000613870 EZH2Q15910 746 aaKnown RBP11.17□□□□□ -0.62
PSMB3-208ENST00000613870 POLKQ9UBT6 870 aa11.17□□□□□ -0.62
PSMB3-208ENST00000613870 EMILIN1Q9Y6C2 1016 aa11.17□□□□□ -0.62
PSMB3-208ENST00000613870 PEAK1Q9H792 1746 aa11.17□□□□□ -0.62
PSMB3-208ENST00000613870 DISP2A7MBM2 1401 aa11.17□□□□□ -0.62
PSMB3-208ENST00000613870 SBF2Q86WG5 1849 aa11.16□□□□□ -0.62
PSMB3-208ENST00000613870 ERBB3P21860 1342 aa11.16□□□□□ -0.62
PSMB3-208ENST00000613870 DDB1Q16531 1140 aa11.16□□□□□ -0.62
PSMB3-208ENST00000613870 CAMKK2Q96RR4 588 aa11.16□□□□□ -0.62
PSMB3-208ENST00000613870 DIAPH1O60610 1272 aaKnown RBP11.15□□□□□ -0.62
PSMB3-208ENST00000613870 APBA3O96018 575 aa11.15□□□□□ -0.62
PSMB3-208ENST00000613870 CENPBP07199 599 aaPredicted RBP11.15□□□□□ -0.62
PSMB3-208ENST00000613870 U2AF1L5P0DN76 240 aaPredicted RBP11.15□□□□□ -0.62
PSMB3-208ENST00000613870 U2AF1Q01081 240 aaKnown RBP eCLIP11.15□□□□□ -0.62
PSMB3-208ENST00000613870 SENP3-EIF4A1A0A087X0R7 540 aa11.14□□□□□ -0.63
PSMB3-208ENST00000613870 MARCH10Q8NA82 808 aaPredicted RBP11.14□□□□□ -0.63
PSMB3-208ENST00000613870 ANKRD24Q8TF21 1146 aa11.14□□□□□ -0.63
PSMB3-208ENST00000613870 IP6K1Q92551 441 aa11.14□□□□□ -0.63
PSMB3-208ENST00000613870 CDCA7Q9BWT1 371 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms