RNA–Protein interactions for RNA: ENST00000613217.4

NCAM1-220, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 3

Gene NCAM1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-220ENST00000613217 CPSF1Q10570 1443 aaKnown RBP17.63■□□□□ 0.41
NCAM1-220ENST00000613217 RGPD3A6NKT7 1758 aaPredicted RBP17.62■□□□□ 0.41
NCAM1-220ENST00000613217 RGPD4Q7Z3J3 1758 aa17.62■□□□□ 0.41
NCAM1-220ENST00000613217 CSB-PGBD3P0DP91 1061 aa17.62■□□□□ 0.41
NCAM1-220ENST00000613217 TTC21BQ7Z4L5 1316 aa17.62■□□□□ 0.41
NCAM1-220ENST00000613217 NUP188Q5SRE5 1749 aa17.61■□□□□ 0.41
NCAM1-220ENST00000613217 KCNQ2O43526 872 aa17.61■□□□□ 0.41
NCAM1-220ENST00000613217 ARHGEF25Q86VW2 580 aa17.61■□□□□ 0.41
NCAM1-220ENST00000613217 CARD10Q9BWT7 1032 aa17.61■□□□□ 0.41
NCAM1-220ENST00000613217 CCDC7Q96M83 1385 aa17.6■□□□□ 0.41
NCAM1-220ENST00000613217 NINLQ9Y2I6 1382 aa17.6■□□□□ 0.41
NCAM1-220ENST00000613217 ABCC6O95255 1503 aa17.6■□□□□ 0.41
NCAM1-220ENST00000613217 EXOC5O00471 708 aa17.59■□□□□ 0.41
NCAM1-220ENST00000613217 KTN1Q86UP2 1357 aaKnown RBP17.58■□□□□ 0.4
NCAM1-220ENST00000613217 PIK3C2AO00443 1686 aa17.58■□□□□ 0.4
NCAM1-220ENST00000613217 LRRC37A3O60309 1634 aa17.58■□□□□ 0.4
NCAM1-220ENST00000613217 SBNO2Q9Y2G9 1366 aa17.57■□□□□ 0.4
NCAM1-220ENST00000613217 PEAK1Q9H792 1746 aa17.56■□□□□ 0.4
NCAM1-220ENST00000613217 AXIN2Q9Y2T1 843 aa17.55■□□□□ 0.4
NCAM1-220ENST00000613217 COL18A1P39060 1754 aa17.54■□□□□ 0.4
NCAM1-220ENST00000613217 SLC24A1O60721 1099 aa17.54■□□□□ 0.4
NCAM1-220ENST00000613217 HDGFL2Q7Z4V5 671 aaPredicted RBP17.54■□□□□ 0.4
NCAM1-220ENST00000613217 YY1P25490 414 aa17.53■□□□□ 0.4
NCAM1-220ENST00000613217 NEUROD1Q13562 356 aa17.53■□□□□ 0.4
NCAM1-220ENST00000613217 MARCH10Q8NA82 808 aaPredicted RBP17.53■□□□□ 0.4
NCAM1-220ENST00000613217 STK32BQ9NY57 414 aa17.53■□□□□ 0.4
NCAM1-220ENST00000613217 AKAP12Q02952 1782 aa17.53■□□□□ 0.4
NCAM1-220ENST00000613217 USP31Q70CQ4 1352 aa17.53■□□□□ 0.4
NCAM1-220ENST00000613217 SOX12O15370 315 aa17.52■□□□□ 0.4
NCAM1-220ENST00000613217 PUS7Q96PZ0 661 aaKnown RBP17.51■□□□□ 0.39
NCAM1-220ENST00000613217 TERF2IPQ9NYB0 399 aa17.51■□□□□ 0.39
NCAM1-220ENST00000613217 SBF2Q86WG5 1849 aa17.51■□□□□ 0.39
NCAM1-220ENST00000613217 WNK3Q9BYP7 1800 aa17.51■□□□□ 0.39
NCAM1-220ENST00000613217 TNS2Q63HR2 1409 aa17.5■□□□□ 0.39
NCAM1-220ENST00000613217 SIN3AQ96ST3 1273 aa17.5■□□□□ 0.39
NCAM1-220ENST00000613217 CARD11Q9BXL7 1154 aa17.5■□□□□ 0.39
NCAM1-220ENST00000613217 NFAT5O94916 1531 aa17.5■□□□□ 0.39
NCAM1-220ENST00000613217 TXNRD1Q16881 649 aa17.49■□□□□ 0.39
NCAM1-220ENST00000613217 ERBB3P21860 1342 aa17.48■□□□□ 0.39
NCAM1-220ENST00000613217 IL2RBP14784 551 aa17.48■□□□□ 0.39
NCAM1-220ENST00000613217 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.48■□□□□ 0.39
NCAM1-220ENST00000613217 TMC1Q8TDI8 760 aa17.48■□□□□ 0.39
NCAM1-220ENST00000613217 NLRP2Q9NX02 1062 aa17.48■□□□□ 0.39
NCAM1-220ENST00000613217 EDC4Q6P2E9 1401 aaKnown RBP17.47■□□□□ 0.39
NCAM1-220ENST00000613217 SLC15A2Q16348 729 aa17.47■□□□□ 0.39
NCAM1-220ENST00000613217 MON2Q7Z3U7 1717 aa17.47■□□□□ 0.39
NCAM1-220ENST00000613217 ANO8Q9HCE9 1232 aaPredicted RBP17.46■□□□□ 0.39
NCAM1-220ENST00000613217 PROM2Q8N271 834 aa17.45■□□□□ 0.38
NCAM1-220ENST00000613217 MTFR1LQ9H019 292 aa17.45■□□□□ 0.38
NCAM1-220ENST00000613217 USP54Q70EL1 1684 aa17.45■□□□□ 0.38
NCAM1-220ENST00000613217 CASZ1Q86V15 1759 aa17.43■□□□□ 0.38
NCAM1-220ENST00000613217 TONSLQ96HA7 1378 aa17.43■□□□□ 0.38
NCAM1-220ENST00000613217 HMGB2P26583 209 aaKnown RBP17.43■□□□□ 0.38
NCAM1-220ENST00000613217 ZBTB7AO95365 584 aa17.42■□□□□ 0.38
NCAM1-220ENST00000613217 NME9Q86XW9 330 aa17.42■□□□□ 0.38
NCAM1-220ENST00000613217 ANKRD24Q8TF21 1146 aa17.42■□□□□ 0.38
NCAM1-220ENST00000613217 RGPD5Q99666 1765 aa17.42■□□□□ 0.38
NCAM1-220ENST00000613217 PTF1AQ7RTS3 328 aa17.41■□□□□ 0.38
NCAM1-220ENST00000613217 NHSQ6T4R5 1651 aa17.41■□□□□ 0.38
NCAM1-220ENST00000613217 CD163L1Q9NR16 1453 aa17.39■□□□□ 0.37
NCAM1-220ENST00000613217 PTGER2P43116 358 aa17.39■□□□□ 0.37
NCAM1-220ENST00000613217 SLC27A3Q5K4L6 730 aa17.39■□□□□ 0.37
NCAM1-220ENST00000613217 IP6K1Q92551 441 aa17.39■□□□□ 0.37
NCAM1-220ENST00000613217 SLC12A5Q9H2X9 1139 aa17.39■□□□□ 0.37
NCAM1-220ENST00000613217 SLC16A10Q8TF71 515 aa17.38■□□□□ 0.37
NCAM1-220ENST00000613217 ACSBG1Q96GR2 724 aa17.38■□□□□ 0.37
NCAM1-220ENST00000613217 COG3Q96JB2 828 aa17.38■□□□□ 0.37
NCAM1-220ENST00000613217 ATF5Q9Y2D1 282 aaPredicted RBP17.38■□□□□ 0.37
NCAM1-220ENST00000613217 A0A1W2PP64 1363 aa17.37■□□□□ 0.37
NCAM1-220ENST00000613217 FAM208AQ9UK61 1670 aaKnown RBP17.36■□□□□ 0.37
NCAM1-220ENST00000613217 LTN1O94822 1766 aa17.36■□□□□ 0.37
NCAM1-220ENST00000613217 SYT17Q9BSW7 474 aa17.36■□□□□ 0.37
NCAM1-220ENST00000613217 ARXQ96QS3 562 aa17.35■□□□□ 0.37
NCAM1-220ENST00000613217 FHDC1Q9C0D6 1143 aaPredicted RBP17.35■□□□□ 0.37
NCAM1-220ENST00000613217 MAP3K5Q99683 1374 aa17.35■□□□□ 0.37
NCAM1-220ENST00000613217 POLD1P28340 1107 aa17.34■□□□□ 0.37
NCAM1-220ENST00000613217 AMPHP49418 695 aa17.34■□□□□ 0.37
NCAM1-220ENST00000613217 PDGFDQ9GZP0 370 aaPredicted RBP17.34■□□□□ 0.37
NCAM1-220ENST00000613217 CGNL1Q0VF96 1302 aa17.33■□□□□ 0.36
NCAM1-220ENST00000613217 MYOM1P52179 1685 aa17.32■□□□□ 0.36
NCAM1-220ENST00000613217 RTL1A6NKG5 1358 aa17.32■□□□□ 0.36
NCAM1-220ENST00000613217 DDX54Q8TDD1 881 aaKnown RBP17.32■□□□□ 0.36
NCAM1-220ENST00000613217 SGIP1Q9BQI5 828 aa17.32■□□□□ 0.36
NCAM1-220ENST00000613217 CDCA8Q53HL2 280 aa17.31■□□□□ 0.36
NCAM1-220ENST00000613217 SMG6Q86US8 1419 aaKnown RBP17.3■□□□□ 0.36
NCAM1-220ENST00000613217 ANKRD36BQ8N2N9 1353 aa17.3■□□□□ 0.36
NCAM1-220ENST00000613217 PAPPAQ13219 1627 aa17.3■□□□□ 0.36
NCAM1-220ENST00000613217 LTV1Q96GA3 475 aaPredicted RBP17.3■□□□□ 0.36
NCAM1-220ENST00000613217 BTAF1O14981 1849 aa17.3■□□□□ 0.36
NCAM1-220ENST00000613217 HOXC9P31274 260 aa17.29■□□□□ 0.36
NCAM1-220ENST00000613217 TMF1P82094 1093 aa17.29■□□□□ 0.36
NCAM1-220ENST00000613217 ZCRB1Q8TBF4 217 aaKnown RBP17.29■□□□□ 0.36
NCAM1-220ENST00000613217 SYTL4Q96C24 671 aaPredicted RBP17.29■□□□□ 0.36
NCAM1-220ENST00000613217 KAT6BQ8WYB5 2073 aa17.28■□□□□ 0.36
NCAM1-220ENST00000613217 MAP3K19Q56UN5 1328 aa17.28■□□□□ 0.36
NCAM1-220ENST00000613217 ST20-MTHFSA0A0A6YYL1 179 aa17.28■□□□□ 0.36
NCAM1-220ENST00000613217 TESK2Q96S53 571 aa17.28■□□□□ 0.36
NCAM1-220ENST00000613217 TFCP2L1Q9NZI6 479 aa17.28■□□□□ 0.36
NCAM1-220ENST00000613217 RAPGEF4Q8WZA2 1011 aa17.27■□□□□ 0.36
NCAM1-220ENST00000613217 AKT1S1Q96B36 256 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms