RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 NFAT5O94916 1531 aa24.44■■□□□ 1.5
PRKN-209ENST00000612485 DISP2A7MBM2 1401 aa24.44■■□□□ 1.5
PRKN-209ENST00000612485 EDC4Q6P2E9 1401 aaKnown RBP24.44■■□□□ 1.5
PRKN-209ENST00000612485 NINLQ9Y2I6 1382 aa24.43■■□□□ 1.5
PRKN-209ENST00000612485 EN1Q05925 392 aaPredicted RBP24.43■■□□□ 1.5
PRKN-209ENST00000612485 TRIM37O94972 964 aa24.42■■□□□ 1.5
PRKN-209ENST00000612485 NME9Q86XW9 330 aa24.42■■□□□ 1.5
PRKN-209ENST00000612485 A0A1W2PP64 1363 aa24.42■■□□□ 1.5
PRKN-209ENST00000612485 PARP4Q9UKK3 1724 aaKnown RBP24.41■■□□□ 1.5
PRKN-209ENST00000612485 TNS1Q9HBL0 1735 aaKnown RBP24.41■■□□□ 1.5
PRKN-209ENST00000612485 USP54Q70EL1 1684 aa24.4■■□□□ 1.5
PRKN-209ENST00000612485 SRCAPQ6ZRS2 3230 aa24.4■■□□□ 1.5
PRKN-209ENST00000612485 C11orf95C9JLR9 678 aaPredicted RBP24.4■■□□□ 1.5
PRKN-209ENST00000612485 CSB-PGBD3P0DP91 1061 aa24.4■■□□□ 1.5
PRKN-209ENST00000612485 ABCC6O95255 1503 aa24.4■■□□□ 1.5
PRKN-209ENST00000612485 TIMELESSQ9UNS1 1208 aa24.39■■□□□ 1.49
PRKN-209ENST00000612485 CLSPNQ9HAW4 1339 aa24.38■■□□□ 1.49
PRKN-209ENST00000612485 CDCA7Q9BWT1 371 aaPredicted RBP24.38■■□□□ 1.49
PRKN-209ENST00000612485 USP47Q96K76 1375 aa24.38■■□□□ 1.49
PRKN-209ENST00000612485 DDB1Q16531 1140 aa24.37■■□□□ 1.49
PRKN-209ENST00000612485 CARD10Q9BWT7 1032 aa24.37■■□□□ 1.49
PRKN-209ENST00000612485 APBA3O96018 575 aa24.36■■□□□ 1.49
PRKN-209ENST00000612485 TMF1P82094 1093 aa24.36■■□□□ 1.49
PRKN-209ENST00000612485 PCGF6Q9BYE7 350 aa24.36■■□□□ 1.49
PRKN-209ENST00000612485 RGPD5Q99666 1765 aa24.35■■□□□ 1.49
PRKN-209ENST00000612485 EZH2Q15910 746 aaKnown RBP24.35■■□□□ 1.49
PRKN-209ENST00000612485 PARD3Q8TEW0 1356 aa24.34■■□□□ 1.49
PRKN-209ENST00000612485 OVOS2A0A0G2JMS6 1433 aa24.34■■□□□ 1.49
PRKN-209ENST00000612485 OVOS2A0A0J9YW53 1432 aa24.34■■□□□ 1.49
PRKN-209ENST00000612485 OVOS2Q6IE36 1432 aa24.34■■□□□ 1.49
PRKN-209ENST00000612485 CCDC7Q96M83 1385 aa24.33■■□□□ 1.49
PRKN-209ENST00000612485 LRRC37A3O60309 1634 aa24.33■■□□□ 1.49
PRKN-209ENST00000612485 CAMKK2Q96RR4 588 aa24.33■■□□□ 1.49
PRKN-209ENST00000612485 WNK3Q9BYP7 1800 aa24.31■■□□□ 1.48
PRKN-209ENST00000612485 ANKRD36BQ8N2N9 1353 aa24.3■■□□□ 1.48
PRKN-209ENST00000612485 PSDA5PKW4 1024 aaPredicted RBP24.3■■□□□ 1.48
PRKN-209ENST00000612485 CDCA8Q53HL2 280 aa24.3■■□□□ 1.48
PRKN-209ENST00000612485 ERBB3P21860 1342 aa24.29■■□□□ 1.48
PRKN-209ENST00000612485 LTN1O94822 1766 aa24.29■■□□□ 1.48
PRKN-209ENST00000612485 COG3Q96JB2 828 aa24.28■■□□□ 1.48
PRKN-209ENST00000612485 PEAK1Q9H792 1746 aa24.27■■□□□ 1.48
PRKN-209ENST00000612485 EXOC5O00471 708 aa24.26■■□□□ 1.47
PRKN-209ENST00000612485 ANKRD24Q8TF21 1146 aa24.26■■□□□ 1.47
PRKN-209ENST00000612485 NLRP2Q9NX02 1062 aa24.26■■□□□ 1.47
PRKN-209ENST00000612485 R3HDM1Q15032 1099 aaKnown RBP24.25■■□□□ 1.47
PRKN-209ENST00000612485 MARCH10Q8NA82 808 aaPredicted RBP24.25■■□□□ 1.47
PRKN-209ENST00000612485 BCL9O00512 1426 aa24.24■■□□□ 1.47
PRKN-209ENST00000612485 IP6K1Q92551 441 aa24.23■■□□□ 1.47
PRKN-209ENST00000612485 RREB1Q92766 1687 aa24.22■■□□□ 1.47
PRKN-209ENST00000612485 BCL11BQ9C0K0 894 aaPredicted RBP24.22■■□□□ 1.47
PRKN-209ENST00000612485 LRP5O75197 1615 aa24.21■■□□□ 1.47
PRKN-209ENST00000612485 TNS2Q63HR2 1409 aa24.21■■□□□ 1.47
PRKN-209ENST00000612485 NBPF14Q5TI25 921 aa24.21■■□□□ 1.47
PRKN-209ENST00000612485 SBF2Q86WG5 1849 aa24.2■■□□□ 1.46
PRKN-209ENST00000612485 IL2RBP14784 551 aa24.2■■□□□ 1.46
PRKN-209ENST00000612485 PLSCR1O15162 318 aa24.19■■□□□ 1.46
PRKN-209ENST00000612485 MAP3K19Q56UN5 1328 aa24.18■■□□□ 1.46
PRKN-209ENST00000612485 AMPHP49418 695 aa24.18■■□□□ 1.46
PRKN-209ENST00000612485 NUP188Q5SRE5 1749 aa24.18■■□□□ 1.46
PRKN-209ENST00000612485 FYB1O15117 783 aa24.17■■□□□ 1.46
PRKN-209ENST00000612485 CCER1Q8TC90 406 aaPredicted RBP24.17■■□□□ 1.46
PRKN-209ENST00000612485 LTV1Q96GA3 475 aaPredicted RBP24.16■■□□□ 1.46
PRKN-209ENST00000612485 GGNBP2Q9H3C7 697 aa24.16■■□□□ 1.46
PRKN-209ENST00000612485 RGPD3A6NKT7 1758 aaPredicted RBP24.16■■□□□ 1.46
PRKN-209ENST00000612485 RGPD4Q7Z3J3 1758 aa24.16■■□□□ 1.46
PRKN-209ENST00000612485 HOXC9P31274 260 aa24.15■■□□□ 1.46
PRKN-209ENST00000612485 FAM208AQ9UK61 1670 aaKnown RBP24.15■■□□□ 1.46
PRKN-209ENST00000612485 RTL1A6NKG5 1358 aa24.14■■□□□ 1.45
PRKN-209ENST00000612485 FBLN1P23142 703 aa24.13■■□□□ 1.45
PRKN-209ENST00000612485 PTF1AQ7RTS3 328 aa24.13■■□□□ 1.45
PRKN-209ENST00000612485 RRS1Q15050 365 aaKnown RBP24.1■■□□□ 1.45
PRKN-209ENST00000612485 MYOM1P52179 1685 aa24.09■■□□□ 1.45
PRKN-209ENST00000612485 KIF20BQ96Q89 1820 aa24.09■■□□□ 1.45
PRKN-209ENST00000612485 NSD3Q9BZ95 1437 aa24.09■■□□□ 1.45
PRKN-209ENST00000612485 CARD14Q9BXL6 1004 aa24.08■■□□□ 1.45
PRKN-209ENST00000612485 EIF4G2P78344 907 aaKnown RBP eCLIP24.07■■□□□ 1.44
PRKN-209ENST00000612485 NHSQ6T4R5 1651 aa24.06■■□□□ 1.44
PRKN-209ENST00000612485 KCNQ2O43526 872 aa24.06■■□□□ 1.44
PRKN-209ENST00000612485 ACSBG1Q96GR2 724 aa24.06■■□□□ 1.44
PRKN-209ENST00000612485 SMG6Q86US8 1419 aaKnown RBP24.06■■□□□ 1.44
PRKN-209ENST00000612485 PROM2Q8N271 834 aa24.05■■□□□ 1.44
PRKN-209ENST00000612485 KIF24Q5T7B8 1368 aa24.04■■□□□ 1.44
PRKN-209ENST00000612485 TXNRD1Q16881 649 aa24.04■■□□□ 1.44
PRKN-209ENST00000612485 POLR3GLQ9BT43 218 aa24.04■■□□□ 1.44
PRKN-209ENST00000612485 DDX54Q8TDD1 881 aaKnown RBP24.03■■□□□ 1.44
PRKN-209ENST00000612485 FLT4P35916 1363 aa24.03■■□□□ 1.44
PRKN-209ENST00000612485 INSRP06213 1382 aa24.02■■□□□ 1.44
PRKN-209ENST00000612485 HSPA5P11021 654 aaKnown RBP24.01■■□□□ 1.43
PRKN-209ENST00000612485 ANO8Q9HCE9 1232 aaPredicted RBP24.01■■□□□ 1.43
PRKN-209ENST00000612485 CGNL1Q0VF96 1302 aa24.01■■□□□ 1.43
PRKN-209ENST00000612485 HSP90AB2PQ58FF8 381 aa24■■□□□ 1.43
PRKN-209ENST00000612485 NBPF6Q5VWK0 638 aa24■■□□□ 1.43
PRKN-209ENST00000612485 ZCRB1Q8TBF4 217 aaKnown RBP24■■□□□ 1.43
PRKN-209ENST00000612485 NBPF4Q96M43 638 aa24■■□□□ 1.43
PRKN-209ENST00000612485 RGPD2P0DJD1 1756 aa23.99■■□□□ 1.43
PRKN-209ENST00000612485 SPON1Q9HCB6 807 aa23.98■■□□□ 1.43
PRKN-209ENST00000612485 STK32BQ9NY57 414 aa23.98■■□□□ 1.43
PRKN-209ENST00000612485 MEGF6O75095 1541 aa23.98■■□□□ 1.43
PRKN-209ENST00000612485 RAPGEF4Q8WZA2 1011 aa23.97■■□□□ 1.43
PRKN-209ENST00000612485 USHBP1Q8N6Y0 703 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms