RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 FYB1O15117 783 aa13.59□□□□□ -0.23
CDH4-202ENST00000611855 PTMSP20962 102 aa13.59□□□□□ -0.23
CDH4-202ENST00000611855 ANKRD36BQ8N2N9 1353 aa13.58□□□□□ -0.24
CDH4-202ENST00000611855 ABCC11Q96J66 1382 aa13.58□□□□□ -0.24
CDH4-202ENST00000611855 ZSCAN23Q3MJ62 389 aa13.58□□□□□ -0.24
CDH4-202ENST00000611855 CDC45O75419 566 aa13.58□□□□□ -0.24
CDH4-202ENST00000611855 CBX1P83916 185 aa13.58□□□□□ -0.24
CDH4-202ENST00000611855 NOL8Q76FK4 1167 aaKnown RBP13.58□□□□□ -0.24
CDH4-202ENST00000611855 NOL7Q9UMY1 257 aaKnown RBP13.58□□□□□ -0.24
CDH4-202ENST00000611855 SMARCA5O60264 1052 aaPredicted RBP13.57□□□□□ -0.24
CDH4-202ENST00000611855 ATP7AQ04656 1500 aa13.57□□□□□ -0.24
CDH4-202ENST00000611855 SMAP1Q8IYB5 467 aaPredicted RBP13.57□□□□□ -0.24
CDH4-202ENST00000611855 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.56□□□□□ -0.24
CDH4-202ENST00000611855 DCTN1Q14203 1278 aa13.56□□□□□ -0.24
CDH4-202ENST00000611855 GCC1Q96CN9 775 aa13.56□□□□□ -0.24
CDH4-202ENST00000611855 ZCCHC11Q5TAX3 1644 aaKnown RBP13.56□□□□□ -0.24
CDH4-202ENST00000611855 VAMP4O75379 141 aa13.56□□□□□ -0.24
CDH4-202ENST00000611855 NSFL1CQ9UNZ2 370 aaKnown RBP13.56□□□□□ -0.24
CDH4-202ENST00000611855 ZKSCAN5Q9Y2L8 839 aa13.56□□□□□ -0.24
CDH4-202ENST00000611855 FAM83GA6ND36 823 aa13.55□□□□□ -0.24
CDH4-202ENST00000611855 MRPL50Q8N5N7 158 aaKnown RBP13.55□□□□□ -0.24
CDH4-202ENST00000611855 LMBRD1Q9NUN5 540 aa13.55□□□□□ -0.24
CDH4-202ENST00000611855 SYCE3A1L190 88 aa13.55□□□□□ -0.24
CDH4-202ENST00000611855 DYNC1I1O14576 645 aa13.55□□□□□ -0.24
CDH4-202ENST00000611855 FANCAO15360 1455 aa13.55□□□□□ -0.24
CDH4-202ENST00000611855 ADGRB2O60241 1585 aa13.54□□□□□ -0.24
CDH4-202ENST00000611855 TERF1P54274 439 aa13.54□□□□□ -0.24
CDH4-202ENST00000611855 PLEKHM2Q8IWE5 1019 aa13.54□□□□□ -0.24
CDH4-202ENST00000611855 GPT2Q8TD30 523 aa13.54□□□□□ -0.24
CDH4-202ENST00000611855 IGSF3O75054 1194 aa13.54□□□□□ -0.24
CDH4-202ENST00000611855 ALDH1L2Q3SY69 923 aa13.54□□□□□ -0.24
CDH4-202ENST00000611855 SASS6Q6UVJ0 657 aa13.54□□□□□ -0.24
CDH4-202ENST00000611855 C8orf58Q8NAV2 365 aa13.54□□□□□ -0.24
CDH4-202ENST00000611855 TULP4Q9NRJ4 1543 aa13.54□□□□□ -0.24
CDH4-202ENST00000611855 ZNF500O60304 480 aaPredicted RBP13.53□□□□□ -0.24
CDH4-202ENST00000611855 CSPP1Q1MSJ5 1256 aa13.53□□□□□ -0.24
CDH4-202ENST00000611855 KRT24Q2M2I5 525 aa13.53□□□□□ -0.24
CDH4-202ENST00000611855 DEPDC5O75140 1603 aa13.53□□□□□ -0.24
CDH4-202ENST00000611855 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
CDH4-202ENST00000611855 ADGRL1O94910 1474 aa13.53□□□□□ -0.24
CDH4-202ENST00000611855 CFAP74Q9C0B2 1584 aa13.53□□□□□ -0.24
CDH4-202ENST00000611855 ZNF830Q96NB3 372 aaPredicted RBP13.52□□□□□ -0.24
CDH4-202ENST00000611855 FGD1P98174 961 aa13.52□□□□□ -0.24
CDH4-202ENST00000611855 TWISTNBQ3B726 338 aaPredicted RBP13.52□□□□□ -0.24
CDH4-202ENST00000611855 PRAM1Q96QH2 718 aa13.52□□□□□ -0.24
CDH4-202ENST00000611855 CABP1Q9NZU7 370 aa13.52□□□□□ -0.24
CDH4-202ENST00000611855 PPRC1Q5VV67 1664 aaKnown RBP13.52□□□□□ -0.25
CDH4-202ENST00000611855 IL16Q14005 1332 aa13.52□□□□□ -0.25
CDH4-202ENST00000611855 MYO3AQ8NEV4 1616 aa13.52□□□□□ -0.25
CDH4-202ENST00000611855 TSHZ3Q63HK5 1081 aa13.52□□□□□ -0.25
CDH4-202ENST00000611855 MTERF4Q7Z6M4 381 aaKnown RBP13.52□□□□□ -0.25
CDH4-202ENST00000611855 RABEP1Q15276 862 aa13.51□□□□□ -0.25
CDH4-202ENST00000611855 ADGRB1O14514 1584 aa13.51□□□□□ -0.25
CDH4-202ENST00000611855 ZNF445P59923 1031 aa13.51□□□□□ -0.25
CDH4-202ENST00000611855 USP26Q9BXU7 913 aa13.51□□□□□ -0.25
CDH4-202ENST00000611855 TMEM63CQ9P1W3 806 aa13.51□□□□□ -0.25
CDH4-202ENST00000611855 NRXN1Q9ULB1 1477 aa13.51□□□□□ -0.25
CDH4-202ENST00000611855 MROH1Q8NDA8 1641 aa13.51□□□□□ -0.25
CDH4-202ENST00000611855 CCDC94Q9BW85 323 aaPredicted RBP13.51□□□□□ -0.25
CDH4-202ENST00000611855 TERF2IPQ9NYB0 399 aa13.51□□□□□ -0.25
CDH4-202ENST00000611855 EMILIN1Q9Y6C2 1016 aa13.51□□□□□ -0.25
CDH4-202ENST00000611855 NPATQ14207 1427 aa13.5□□□□□ -0.25
CDH4-202ENST00000611855 EFCAB6Q5THR3 1501 aa13.5□□□□□ -0.25
CDH4-202ENST00000611855 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
CDH4-202ENST00000611855 NUCB2P80303 420 aa13.5□□□□□ -0.25
CDH4-202ENST00000611855 ZDHHC9Q9Y397 364 aa13.5□□□□□ -0.25
CDH4-202ENST00000611855 SDSP20132 328 aa13.5□□□□□ -0.25
CDH4-202ENST00000611855 TTC22Q5TAA0 569 aa13.5□□□□□ -0.25
CDH4-202ENST00000611855 C17orf53Q8N3J3 647 aaPredicted RBP13.5□□□□□ -0.25
CDH4-202ENST00000611855 CCDC39Q9UFE4 941 aa13.5□□□□□ -0.25
CDH4-202ENST00000611855 NSD2O96028 1365 aa13.5□□□□□ -0.25
CDH4-202ENST00000611855 VWDEQ8N2E2 1590 aa13.5□□□□□ -0.25
CDH4-202ENST00000611855 IFT172Q9UG01 1749 aa13.5□□□□□ -0.25
CDH4-202ENST00000611855 BBXQ8WY36 941 aaPredicted RBP13.49□□□□□ -0.25
CDH4-202ENST00000611855 GDPD2Q9HCC8 539 aa13.49□□□□□ -0.25
CDH4-202ENST00000611855 ZRANB1Q9UGI0 708 aa13.49□□□□□ -0.25
CDH4-202ENST00000611855 PLCB2Q00722 1185 aa13.49□□□□□ -0.25
CDH4-202ENST00000611855 HS1BP3Q53T59 392 aa13.49□□□□□ -0.25
CDH4-202ENST00000611855 COL3A1P02461 1466 aaPredicted RBP13.48□□□□□ -0.25
CDH4-202ENST00000611855 ZC3H13Q5T200 1668 aaKnown RBP13.48□□□□□ -0.25
CDH4-202ENST00000611855 FCHSD2O94868 740 aa13.48□□□□□ -0.25
CDH4-202ENST00000611855 DMTNQ08495 405 aa13.48□□□□□ -0.25
CDH4-202ENST00000611855 NFE2L2Q16236 605 aa13.48□□□□□ -0.25
CDH4-202ENST00000611855 VGFO15240 615 aaPredicted RBP13.47□□□□□ -0.25
CDH4-202ENST00000611855 ZSCAN20P17040 1043 aaPredicted RBP13.47□□□□□ -0.25
CDH4-202ENST00000611855 PPP4R3BQ5MIZ7 849 aa13.47□□□□□ -0.25
CDH4-202ENST00000611855 PDLIM2Q96JY6 352 aa13.47□□□□□ -0.25
CDH4-202ENST00000611855 POLKQ9UBT6 870 aa13.47□□□□□ -0.25
CDH4-202ENST00000611855 ADGRB3O60242 1522 aa13.47□□□□□ -0.25
CDH4-202ENST00000611855 ASXL2Q76L83 1435 aa13.47□□□□□ -0.25
CDH4-202ENST00000611855 DTNBO60941 627 aa13.47□□□□□ -0.25
CDH4-202ENST00000611855 KIAA2012Q0VF49 1180 aa13.47□□□□□ -0.25
CDH4-202ENST00000611855 GLI2P10070 1586 aa13.47□□□□□ -0.25
CDH4-202ENST00000611855 NCBP3Q53F19 620 aaKnown RBP13.47□□□□□ -0.25
CDH4-202ENST00000611855 INTS3Q68E01 1043 aaKnown RBP13.47□□□□□ -0.25
CDH4-202ENST00000611855 HDGFL2Q7Z4V5 671 aaPredicted RBP13.47□□□□□ -0.25
CDH4-202ENST00000611855 ST18O60284 1047 aa13.46□□□□□ -0.25
CDH4-202ENST00000611855 CYP2E1P05181 493 aaPredicted RBP13.46□□□□□ -0.25
CDH4-202ENST00000611855 NEK4P51957 841 aa13.46□□□□□ -0.25
CDH4-202ENST00000611855 CDK19Q9BWU1 502 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms