RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 TBC1D9Q6ZT07 1266 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 HOMER1Q86YM7 354 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 RTEL1-TNFRSF6BF6WH68 1400 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 NOS1P29475 1434 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 GTF2E1P29083 439 aaPredicted RBP4.58□□□□□ -1.68
RNF38-210ENST00000611646 AAMPQ13685 434 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 CLASRPQ8N2M8 674 aaKnown RBP4.58□□□□□ -1.68
RNF38-210ENST00000611646 STAC3Q96MF2 364 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 TESK2Q96S53 571 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 TRIM5Q9C035 493 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 UGGT2Q9NYU1 1516 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 RAD21O60216 631 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 EVA1CP58658 441 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 KRT24Q2M2I5 525 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 NFXL1Q6ZNB6 911 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 CARD14Q9BXL6 1004 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 CUL7Q14999 1698 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 FCHSD2O94868 740 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 GNAI3P08754 354 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 PRKCSHP14314 528 aaPredicted RBP4.57□□□□□ -1.68
RNF38-210ENST00000611646 CCDC173Q0VFZ6 552 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 TTLL5Q6EMB2 1281 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 NUDT16Q96DE0 195 aaKnown RBP4.57□□□□□ -1.68
RNF38-210ENST00000611646 CCDC39Q9UFE4 941 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 IDI1Q13907 227 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 RNF20Q5VTR2 975 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 JAKMIP1Q96N16 626 aaKnown RBP4.57□□□□□ -1.68
RNF38-210ENST00000611646 TBC1D32Q96NH3 1257 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 PRDM10Q9NQV6 1147 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 MBIPQ9NS73 344 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 HDAC5Q9UQL6 1122 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 GRIN2AQ12879 1464 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 UQCRHLA0A096LP55 91 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 DDX58O95786 925 aaKnown RBP4.57□□□□□ -1.68
RNF38-210ENST00000611646 ANXA1P04083 346 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 UQCRHP07919 91 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 TPD52L1Q16890 204 aaPredicted RBP4.57□□□□□ -1.68
RNF38-210ENST00000611646 AACSQ86V21 672 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 JARID2Q92833 1246 aaPredicted RBP4.57□□□□□ -1.68
RNF38-210ENST00000611646 DDX11Q96FC9 970 aa4.57□□□□□ -1.68
RNF38-210ENST00000611646 CASTP20810 708 aaKnown RBP4.56□□□□□ -1.68
RNF38-210ENST00000611646 RAPGEF4Q8WZA2 1011 aa4.56□□□□□ -1.68
RNF38-210ENST00000611646 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.56□□□□□ -1.68
RNF38-210ENST00000611646 PARD3Q8TEW0 1356 aa4.56□□□□□ -1.68
RNF38-210ENST00000611646 PER1O15534 1290 aaPredicted RBP4.56□□□□□ -1.68
RNF38-210ENST00000611646 CCDC83Q8IWF9 413 aa4.56□□□□□ -1.68
RNF38-210ENST00000611646 TSPYL6Q8N831 410 aa4.56□□□□□ -1.68
RNF38-210ENST00000611646 SDF4Q9BRK5 362 aa4.56□□□□□ -1.68
RNF38-210ENST00000611646 SPG7Q9UQ90 795 aa4.56□□□□□ -1.68
RNF38-210ENST00000611646 NCKAP5LQ9HCH0 1330 aa4.56□□□□□ -1.68
RNF38-210ENST00000611646 KIF14Q15058 1648 aa4.56□□□□□ -1.68
RNF38-210ENST00000611646 PDILTQ8N807 584 aa4.56□□□□□ -1.68
RNF38-210ENST00000611646 GAS2L2Q8NHY3 880 aa4.56□□□□□ -1.68
RNF38-210ENST00000611646 SRCIN1Q9C0H9 1055 aa4.56□□□□□ -1.68
RNF38-210ENST00000611646 NUP153P49790 1475 aaKnown RBP4.56□□□□□ -1.68
RNF38-210ENST00000611646 XRCC6P12956 609 aaKnown RBP eCLIP4.56□□□□□ -1.68
RNF38-210ENST00000611646 TNNT3P45378 269 aaPredicted RBP4.56□□□□□ -1.68
RNF38-210ENST00000611646 VPS53Q5VIR6 699 aa4.56□□□□□ -1.68
RNF38-210ENST00000611646 ZNF530Q6P9A1 599 aaPredicted RBP4.56□□□□□ -1.68
RNF38-210ENST00000611646 KIF3AQ9Y496 699 aa4.56□□□□□ -1.68
RNF38-210ENST00000611646 LRRFIP2Q9Y608 721 aaKnown RBP4.56□□□□□ -1.68
RNF38-210ENST00000611646 NINLQ9Y2I6 1382 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 SMC2O95347 1197 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 PRPF40BQ6NWY9 871 aaKnown RBP4.55□□□□□ -1.68
RNF38-210ENST00000611646 CCDC73Q6ZRK6 1079 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 AEBP1Q8IUX7 1158 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 ZNF830Q96NB3 372 aaPredicted RBP4.55□□□□□ -1.68
RNF38-210ENST00000611646 CHMP4AQ9BY43 222 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 PRAG1Q86YV5 1406 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 SCAF11Q99590 1463 aaKnown RBP4.55□□□□□ -1.68
RNF38-210ENST00000611646 MX1P20591 662 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 CCT4P50991 539 aaKnown RBP4.55□□□□□ -1.68
RNF38-210ENST00000611646 RRP12Q5JTH9 1297 aaKnown RBP4.55□□□□□ -1.68
RNF38-210ENST00000611646 LARP1BQ659C4 914 aaKnown RBP4.55□□□□□ -1.68
RNF38-210ENST00000611646 FAM177A1Q8N128 213 aaPredicted RBP4.55□□□□□ -1.68
RNF38-210ENST00000611646 BTBD11A6QL63 1104 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 CEBPAP49715 358 aaPredicted RBP4.55□□□□□ -1.68
RNF38-210ENST00000611646 ZC3H6P61129 1189 aaKnown RBP4.55□□□□□ -1.68
RNF38-210ENST00000611646 C8orf58Q8NAV2 365 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 STRN4Q9NRL3 753 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 CYP46A1Q9Y6A2 500 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 RALGAPBQ86X10 1494 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 MBD3O95983 291 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 AKAP17AQ02040 695 aaKnown RBP4.55□□□□□ -1.68
RNF38-210ENST00000611646 TRIM29Q14134 588 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 SKIDA1Q1XH10 827 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 HSP90AB4PQ58FF6 505 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 NOC3LQ8WTT2 800 aaKnown RBP4.55□□□□□ -1.68
RNF38-210ENST00000611646 MEIS3Q99687 375 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 CCDC8Q9H0W5 538 aaPredicted RBP4.55□□□□□ -1.68
RNF38-210ENST00000611646 BOLA2Q9H3K6 86 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 PDRG1Q9NUG6 133 aa4.55□□□□□ -1.68
RNF38-210ENST00000611646 ATAD2Q6PL18 1390 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 CT47B1P0C2W7 299 aaPredicted RBP4.54□□□□□ -1.68
RNF38-210ENST00000611646 GUCY1B3Q02153 619 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 FKBP4Q02790 459 aaKnown RBP eCLIP4.54□□□□□ -1.68
RNF38-210ENST00000611646 TRDNQ13061 729 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 MAPK8IP2Q13387 824 aaPredicted RBP4.54□□□□□ -1.68
RNF38-210ENST00000611646 MPRIPQ6WCQ1 1025 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 SYNE3Q6ZMZ3 975 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms