RNA–Protein interactions for RNA: ENST00000611589.4

NRXN1-220, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-220ENST00000611589 EXOSC9Q06265 439 aaKnown RBP23.14■■□□□ 1.29
NRXN1-220ENST00000611589 PHACTR3Q96KR7 559 aa23.14■■□□□ 1.29
NRXN1-220ENST00000611589 EIF4A2Q14240 407 aaKnown RBP23.13■■□□□ 1.29
NRXN1-220ENST00000611589 ZNF428Q96B54 188 aa23.13■■□□□ 1.29
NRXN1-220ENST00000611589 SBNO1A3KN83 1393 aa23.13■■□□□ 1.29
NRXN1-220ENST00000611589 KIF24Q5T7B8 1368 aa23.13■■□□□ 1.29
NRXN1-220ENST00000611589 FRAT1Q92837 279 aaPredicted RBP23.12■■□□□ 1.29
NRXN1-220ENST00000611589 FLT4P35916 1363 aa23.12■■□□□ 1.29
NRXN1-220ENST00000611589 CLUAP1Q96AJ1 413 aa23.11■■□□□ 1.29
NRXN1-220ENST00000611589 ARHGEF10O15013 1369 aa23.1■■□□□ 1.29
NRXN1-220ENST00000611589 ZKSCAN2Q63HK3 967 aa23.1■■□□□ 1.29
NRXN1-220ENST00000611589 PANK1Q8TE04 598 aa23.1■■□□□ 1.29
NRXN1-220ENST00000611589 IFT57Q9NWB7 429 aa23.1■■□□□ 1.29
NRXN1-220ENST00000611589 GNAI1P63096 354 aa23.09■■□□□ 1.29
NRXN1-220ENST00000611589 ALDH1L2Q3SY69 923 aa23.09■■□□□ 1.29
NRXN1-220ENST00000611589 COG6Q9Y2V7 657 aa23.09■■□□□ 1.29
NRXN1-220ENST00000611589 MAP3K19Q56UN5 1328 aa23.08■■□□□ 1.29
NRXN1-220ENST00000611589 SMC4Q9NTJ3 1288 aa23.07■■□□□ 1.28
NRXN1-220ENST00000611589 ZNF853P0CG23 659 aa23.07■■□□□ 1.28
NRXN1-220ENST00000611589 KIF16BQ96L93 1317 aa23.06■■□□□ 1.28
NRXN1-220ENST00000611589 BCL2L13Q9BXK5 485 aa23.06■■□□□ 1.28
NRXN1-220ENST00000611589 BRPF1P55201 1214 aaPredicted RBP23.05■■□□□ 1.28
NRXN1-220ENST00000611589 PHF8Q9UPP1 1060 aa23.05■■□□□ 1.28
NRXN1-220ENST00000611589 SSH1Q8WYL5 1049 aa23.05■■□□□ 1.28
NRXN1-220ENST00000611589 HSP90AB2PQ58FF8 381 aa23.04■■□□□ 1.28
NRXN1-220ENST00000611589 SULT6B1Q6IMI4 303 aa23.04■■□□□ 1.28
NRXN1-220ENST00000611589 RLBP1P12271 317 aa23.03■■□□□ 1.28
NRXN1-220ENST00000611589 DZIP1LQ8IYY4 767 aaKnown RBP23.03■■□□□ 1.28
NRXN1-220ENST00000611589 KDRP35968 1356 aa23.03■■□□□ 1.28
NRXN1-220ENST00000611589 MVPQ14764 893 aaKnown RBP23.02■■□□□ 1.28
NRXN1-220ENST00000611589 NLRP6P59044 892 aa23.02■■□□□ 1.28
NRXN1-220ENST00000611589 CFAP44Q96MT7 982 aa23.02■■□□□ 1.28
NRXN1-220ENST00000611589 IPO8O15397 1037 aaKnown RBP23.01■■□□□ 1.27
NRXN1-220ENST00000611589 FTSJ3Q8IY81 847 aaKnown RBP23.01■■□□□ 1.27
NRXN1-220ENST00000611589 RTL1A6NKG5 1358 aa23.01■■□□□ 1.27
NRXN1-220ENST00000611589 ATF7IPQ6VMQ6 1270 aa23■■□□□ 1.27
NRXN1-220ENST00000611589 AEBP1Q8IUX7 1158 aa23■■□□□ 1.27
NRXN1-220ENST00000611589 PDE4AP27815 886 aa23■■□□□ 1.27
NRXN1-220ENST00000611589 BACH2Q9BYV9 841 aa23■■□□□ 1.27
NRXN1-220ENST00000611589 AMPHP49418 695 aa22.99■■□□□ 1.27
NRXN1-220ENST00000611589 PHRF1Q9P1Y6 1649 aaKnown RBP22.99■■□□□ 1.27
NRXN1-220ENST00000611589 IGSF1Q8N6C5 1336 aa22.99■■□□□ 1.27
NRXN1-220ENST00000611589 LTN1O94822 1766 aa22.99■■□□□ 1.27
NRXN1-220ENST00000611589 TNNQ9UQP3 1299 aa22.98■■□□□ 1.27
NRXN1-220ENST00000611589 TRIM27P14373 513 aa22.98■■□□□ 1.27
NRXN1-220ENST00000611589 KIF1AQ12756 1690 aa22.98■■□□□ 1.27
NRXN1-220ENST00000611589 ABTB2Q8N961 1025 aa22.97■■□□□ 1.27
NRXN1-220ENST00000611589 THUMPD2Q9BTF0 503 aaKnown RBP22.97■■□□□ 1.27
NRXN1-220ENST00000611589 MBIPQ9NS73 344 aa22.97■■□□□ 1.27
NRXN1-220ENST00000611589 LAS1LQ9Y4W2 734 aaKnown RBP22.97■■□□□ 1.27
NRXN1-220ENST00000611589 NFAT5O94916 1531 aa22.96■■□□□ 1.27
NRXN1-220ENST00000611589 SOX12O15370 315 aa22.96■■□□□ 1.27
NRXN1-220ENST00000611589 VAMP4O75379 141 aa22.96■■□□□ 1.27
NRXN1-220ENST00000611589 IGHDP01880 384 aa22.96■■□□□ 1.27
NRXN1-220ENST00000611589 DDX19BQ9UMR2 479 aa22.96■■□□□ 1.27
NRXN1-220ENST00000611589 NOB1Q9ULX3 412 aaKnown RBP22.95■■□□□ 1.26
NRXN1-220ENST00000611589 ARHGAP45Q92619 1136 aa22.94■■□□□ 1.26
NRXN1-220ENST00000611589 ANP32AP39687 249 aaKnown RBP22.94■■□□□ 1.26
NRXN1-220ENST00000611589 HOXC9P31274 260 aa22.93■■□□□ 1.26
NRXN1-220ENST00000611589 HAP1P54257 671 aaPredicted RBP22.93■■□□□ 1.26
NRXN1-220ENST00000611589 VIRMAQ69YN4 1812 aaKnown RBP22.93■■□□□ 1.26
NRXN1-220ENST00000611589 PAK3O75914 559 aaPredicted RBP22.92■■□□□ 1.26
NRXN1-220ENST00000611589 RWDD1Q9H446 243 aaPredicted RBP22.92■■□□□ 1.26
NRXN1-220ENST00000611589 LRRC37A3O60309 1634 aa22.92■■□□□ 1.26
NRXN1-220ENST00000611589 FAM83GA6ND36 823 aa22.91■■□□□ 1.26
NRXN1-220ENST00000611589 EYA1Q99502 592 aa22.91■■□□□ 1.26
NRXN1-220ENST00000611589 PCDHB15Q9Y5E8 787 aa22.91■■□□□ 1.26
NRXN1-220ENST00000611589 TRPM3Q9HCF6 1732 aaPredicted RBP22.91■■□□□ 1.26
NRXN1-220ENST00000611589 MSH5O43196 834 aa22.9■■□□□ 1.26
NRXN1-220ENST00000611589 TWISTNBQ3B726 338 aaPredicted RBP22.9■■□□□ 1.26
NRXN1-220ENST00000611589 ESCO1Q5FWF5 840 aa22.9■■□□□ 1.26
NRXN1-220ENST00000611589 MRPL50Q8N5N7 158 aaKnown RBP22.9■■□□□ 1.26
NRXN1-220ENST00000611589 KIAA0232Q92628 1395 aa22.9■■□□□ 1.26
NRXN1-220ENST00000611589 C14orf37Q86TY3 774 aa22.9■■□□□ 1.26
NRXN1-220ENST00000611589 GAS2L2Q8NHY3 880 aa22.9■■□□□ 1.26
NRXN1-220ENST00000611589 SLIT3O75094 1523 aa22.89■■□□□ 1.26
NRXN1-220ENST00000611589 CHL1O00533 1208 aa22.89■■□□□ 1.25
NRXN1-220ENST00000611589 CRB1P82279 1406 aa22.89■■□□□ 1.25
NRXN1-220ENST00000611589 PSME1Q06323 249 aa22.89■■□□□ 1.25
NRXN1-220ENST00000611589 NCOA3Q9Y6Q9 1424 aa22.88■■□□□ 1.25
NRXN1-220ENST00000611589 HTATSF1O43719 755 aaKnown RBP22.88■■□□□ 1.25
NRXN1-220ENST00000611589 SKAP1Q86WV1 359 aa22.88■■□□□ 1.25
NRXN1-220ENST00000611589 KCNH5Q8NCM2 988 aa22.88■■□□□ 1.25
NRXN1-220ENST00000611589 CHMP4BQ9H444 224 aaKnown RBP22.88■■□□□ 1.25
NRXN1-220ENST00000611589 DCTN1Q14203 1278 aa22.88■■□□□ 1.25
NRXN1-220ENST00000611589 ITPRIPQ8IWB1 547 aa22.88■■□□□ 1.25
NRXN1-220ENST00000611589 TSPYL6Q8N831 410 aa22.88■■□□□ 1.25
NRXN1-220ENST00000611589 FAM161AQ3B820 660 aa22.87■■□□□ 1.25
NRXN1-220ENST00000611589 TMEM57Q8N5G2 664 aa22.87■■□□□ 1.25
NRXN1-220ENST00000611589 RBM33Q96EV2 1170 aaKnown RBP22.87■■□□□ 1.25
NRXN1-220ENST00000611589 DCCP43146 1447 aa22.86■■□□□ 1.25
NRXN1-220ENST00000611589 NUTM2GQ5VZR2 741 aa22.86■■□□□ 1.25
NRXN1-220ENST00000611589 PROSER2Q86WR7 435 aaPredicted RBP22.86■■□□□ 1.25
NRXN1-220ENST00000611589 MST1RQ04912 1400 aa22.86■■□□□ 1.25
NRXN1-220ENST00000611589 C8orf58Q8NAV2 365 aa22.85■■□□□ 1.25
NRXN1-220ENST00000611589 HDAC1Q13547 482 aaPredicted RBP22.85■■□□□ 1.25
NRXN1-220ENST00000611589 MTHFSDQ2M296 383 aaKnown RBP22.85■■□□□ 1.25
NRXN1-220ENST00000611589 IP6K1Q92551 441 aa22.85■■□□□ 1.25
NRXN1-220ENST00000611589 C1orf167Q5SNV9 1468 aa22.84■■□□□ 1.25
NRXN1-220ENST00000611589 RTF1Q92541 710 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms