RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 NLRP6P59044 892 aa8.38□□□□□ -1.07
SYNPO2-206ENST00000610556 SMC5Q8IY18 1101 aa8.38□□□□□ -1.07
SYNPO2-206ENST00000610556 CCDC61Q9Y6R9 512 aa8.38□□□□□ -1.07
SYNPO2-206ENST00000610556 SAMD9LQ8IVG5 1584 aa8.38□□□□□ -1.07
SYNPO2-206ENST00000610556 IL1RAPL2Q9NP60 686 aa8.38□□□□□ -1.07
SYNPO2-206ENST00000610556 CIZ1Q9ULV3 898 aaPredicted RBP8.38□□□□□ -1.07
SYNPO2-206ENST00000610556 SURF6O75683 361 aaKnown RBP8.37□□□□□ -1.07
SYNPO2-206ENST00000610556 IFT57Q9NWB7 429 aa8.37□□□□□ -1.07
SYNPO2-206ENST00000610556 POLKQ9UBT6 870 aa8.37□□□□□ -1.07
SYNPO2-206ENST00000610556 KIF13AQ9H1H9 1805 aa8.37□□□□□ -1.07
SYNPO2-206ENST00000610556 R3HCC1Q9Y3T6 440 aaKnown RBP8.37□□□□□ -1.07
SYNPO2-206ENST00000610556 A0A1W2PP64 1363 aa8.37□□□□□ -1.07
SYNPO2-206ENST00000610556 UPF3BQ9BZI7 483 aaKnown RBP8.37□□□□□ -1.07
SYNPO2-206ENST00000610556 NCKAP5LQ9HCH0 1330 aa8.37□□□□□ -1.07
SYNPO2-206ENST00000610556 PTPRTO14522 1441 aa8.37□□□□□ -1.07
SYNPO2-206ENST00000610556 ERC2O15083 957 aa8.36□□□□□ -1.07
SYNPO2-206ENST00000610556 UBTFL1P0CB47 393 aaPredicted RBP8.36□□□□□ -1.07
SYNPO2-206ENST00000610556 TEFQ10587 303 aa8.36□□□□□ -1.07
SYNPO2-206ENST00000610556 DIAPH3Q9NSV4 1193 aa8.36□□□□□ -1.07
SYNPO2-206ENST00000610556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.36□□□□□ -1.07
SYNPO2-206ENST00000610556 VAMP4O75379 141 aa8.36□□□□□ -1.07
SYNPO2-206ENST00000610556 GNAI2P04899 355 aa8.36□□□□□ -1.07
SYNPO2-206ENST00000610556 AEBP1Q8IUX7 1158 aa8.36□□□□□ -1.07
SYNPO2-206ENST00000610556 MAST1Q9Y2H9 1570 aa8.36□□□□□ -1.07
SYNPO2-206ENST00000610556 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.36□□□□□ -1.07
SYNPO2-206ENST00000610556 ZRSR1Q15695 479 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-206ENST00000610556 ARHGEF5Q12774 1597 aa8.36□□□□□ -1.07
SYNPO2-206ENST00000610556 NSD2O96028 1365 aa8.36□□□□□ -1.07
SYNPO2-206ENST00000610556 RRAGDQ9NQL2 400 aaPredicted RBP8.35□□□□□ -1.07
SYNPO2-206ENST00000610556 C9orf78Q9NZ63 289 aaPredicted RBP8.35□□□□□ -1.07
SYNPO2-206ENST00000610556 ATP10AO60312 1499 aa8.35□□□□□ -1.07
SYNPO2-206ENST00000610556 IL16Q14005 1332 aa8.35□□□□□ -1.07
SYNPO2-206ENST00000610556 VPS37CA5D8V6 355 aaPredicted RBP8.35□□□□□ -1.07
SYNPO2-206ENST00000610556 RPAP2Q8IXW5 612 aaPredicted RBP8.35□□□□□ -1.07
SYNPO2-206ENST00000610556 MRPL50Q8N5N7 158 aaKnown RBP8.35□□□□□ -1.07
SYNPO2-206ENST00000610556 GAS2L2Q8NHY3 880 aa8.35□□□□□ -1.07
SYNPO2-206ENST00000610556 PREX2Q70Z35 1606 aa8.35□□□□□ -1.07
SYNPO2-206ENST00000610556 UGGT1Q9NYU2 1555 aa8.35□□□□□ -1.07
SYNPO2-206ENST00000610556 RBM10P98175 930 aaKnown RBP8.35□□□□□ -1.07
SYNPO2-206ENST00000610556 MEIS3Q99687 375 aa8.35□□□□□ -1.07
SYNPO2-206ENST00000610556 ZNF330Q9Y3S2 320 aaPredicted RBP8.35□□□□□ -1.07
SYNPO2-206ENST00000610556 USP19O94966 1318 aa8.34□□□□□ -1.07
SYNPO2-206ENST00000610556 WASLO00401 505 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-206ENST00000610556 PHF14O94880 888 aa8.34□□□□□ -1.07
SYNPO2-206ENST00000610556 GNAI3P08754 354 aa8.34□□□□□ -1.07
SYNPO2-206ENST00000610556 LRRCC1Q9C099 1032 aa8.34□□□□□ -1.07
SYNPO2-206ENST00000610556 ASXL2Q76L83 1435 aa8.34□□□□□ -1.07
SYNPO2-206ENST00000610556 TTC37Q6PGP7 1564 aa8.34□□□□□ -1.07
SYNPO2-206ENST00000610556 ERVK-7P63135 1459 aa8.34□□□□□ -1.07
SYNPO2-206ENST00000610556 CFAP65Q6ZU64 1925 aaKnown RBP8.34□□□□□ -1.07
SYNPO2-206ENST00000610556 BAG4O95429 457 aaKnown RBP8.34□□□□□ -1.07
SYNPO2-206ENST00000610556 CCDC173Q0VFZ6 552 aa8.34□□□□□ -1.07
SYNPO2-206ENST00000610556 CHAF1AQ13111 956 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-206ENST00000610556 GPATCH3Q96I76 525 aa8.34□□□□□ -1.07
SYNPO2-206ENST00000610556 LARP6Q9BRS8 491 aaKnown RBP8.34□□□□□ -1.07
SYNPO2-206ENST00000610556 SYCE3A1L190 88 aa8.34□□□□□ -1.08
SYNPO2-206ENST00000610556 ZBTB7BO15156 539 aaPredicted RBP8.34□□□□□ -1.08
SYNPO2-206ENST00000610556 AIMP1Q12904 312 aaKnown RBP8.34□□□□□ -1.08
SYNPO2-206ENST00000610556 CCDC30Q5VVM6 783 aa8.34□□□□□ -1.08
SYNPO2-206ENST00000610556 OTUD7AQ8TE49 926 aaPredicted RBP8.34□□□□□ -1.08
SYNPO2-206ENST00000610556 ZNF692Q9BU19 519 aaPredicted RBP8.34□□□□□ -1.08
SYNPO2-206ENST00000610556 SMC3Q9UQE7 1217 aa8.34□□□□□ -1.08
SYNPO2-206ENST00000610556 PRDM15P57071 1507 aaPredicted RBP8.34□□□□□ -1.08
SYNPO2-206ENST00000610556 SDSP20132 328 aa8.33□□□□□ -1.08
SYNPO2-206ENST00000610556 HSP90AB2PQ58FF8 381 aa8.33□□□□□ -1.08
SYNPO2-206ENST00000610556 HDGFL1Q5TGJ6 251 aa8.33□□□□□ -1.08
SYNPO2-206ENST00000610556 NUTM1Q86Y26 1132 aa8.33□□□□□ -1.08
SYNPO2-206ENST00000610556 RBM27Q9P2N5 1060 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-206ENST00000610556 ABCA9Q8IUA7 1624 aa8.33□□□□□ -1.08
SYNPO2-206ENST00000610556 MAP3K4Q9Y6R4 1608 aa8.33□□□□□ -1.08
SYNPO2-206ENST00000610556 FIBPO43427 364 aa8.33□□□□□ -1.08
SYNPO2-206ENST00000610556 IFIT2P09913 472 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-206ENST00000610556 CSB-PGBD3P0DP91 1061 aa8.33□□□□□ -1.08
SYNPO2-206ENST00000610556 HSP90B1P14625 803 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-206ENST00000610556 GDPD2Q9HCC8 539 aa8.33□□□□□ -1.08
SYNPO2-206ENST00000610556 CCT4P50991 539 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-206ENST00000610556 ISY1Q9ULR0 285 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-206ENST00000610556 TTC22Q5TAA0 569 aa8.32□□□□□ -1.08
SYNPO2-206ENST00000610556 ABTB2Q8N961 1025 aa8.32□□□□□ -1.08
SYNPO2-206ENST00000610556 DDX54Q8TDD1 881 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-206ENST00000610556 CWC22Q9HCG8 908 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-206ENST00000610556 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.32□□□□□ -1.08
SYNPO2-206ENST00000610556 BCL11BQ9C0K0 894 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-206ENST00000610556 SRGAP3O43295 1099 aa8.31□□□□□ -1.08
SYNPO2-206ENST00000610556 ZKSCAN1P17029 563 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-206ENST00000610556 FOSBP53539 338 aa8.31□□□□□ -1.08
SYNPO2-206ENST00000610556 ZGPATQ8N5A5 531 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-206ENST00000610556 ARHGAP45Q92619 1136 aa8.31□□□□□ -1.08
SYNPO2-206ENST00000610556 SNX21Q969T3 373 aa8.31□□□□□ -1.08
SYNPO2-206ENST00000610556 MBD3O95983 291 aa8.31□□□□□ -1.08
SYNPO2-206ENST00000610556 TRHP20396 242 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-206ENST00000610556 C1orf141Q5JVX7 400 aa8.31□□□□□ -1.08
SYNPO2-206ENST00000610556 PLEKHM2Q8IWE5 1019 aa8.31□□□□□ -1.08
SYNPO2-206ENST00000610556 USHBP1Q8N6Y0 703 aa8.31□□□□□ -1.08
SYNPO2-206ENST00000610556 ATP6V1DQ9Y5K8 247 aa8.31□□□□□ -1.08
SYNPO2-206ENST00000610556 FOXO3O43524 673 aa8.3□□□□□ -1.08
SYNPO2-206ENST00000610556 MX1P20591 662 aa8.3□□□□□ -1.08
SYNPO2-206ENST00000610556 CWC27Q6UX04 472 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-206ENST00000610556 RUFY2Q8WXA3 655 aa8.3□□□□□ -1.08
SYNPO2-206ENST00000610556 ANTXR1Q9H6X2 564 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms