RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 TSR2Q969E8 191 aaKnown RBP15.34■□□□□ 0.05
USP6NL-206ENST00000609853 ANP32EQ9BTT0 268 aa15.34■□□□□ 0.05
USP6NL-206ENST00000609853 COG6Q9Y2V7 657 aa15.34■□□□□ 0.05
USP6NL-206ENST00000609853 FMN2Q9NZ56 1722 aa15.34■□□□□ 0.05
USP6NL-206ENST00000609853 GNAI1P63096 354 aa15.33■□□□□ 0.04
USP6NL-206ENST00000609853 RRS1Q15050 365 aaKnown RBP15.33■□□□□ 0.04
USP6NL-206ENST00000609853 IFT57Q9NWB7 429 aa15.33■□□□□ 0.04
USP6NL-206ENST00000609853 RGPD8O14715 1765 aaPredicted RBP15.33■□□□□ 0.04
USP6NL-206ENST00000609853 KIF16BQ96L93 1317 aa15.33■□□□□ 0.04
USP6NL-206ENST00000609853 DLG5Q8TDM6 1919 aa15.32■□□□□ 0.04
USP6NL-206ENST00000609853 IPO8O15397 1037 aaKnown RBP15.32■□□□□ 0.04
USP6NL-206ENST00000609853 HMOX1P09601 288 aa15.32■□□□□ 0.04
USP6NL-206ENST00000609853 BRPF1P55201 1214 aaPredicted RBP15.32■□□□□ 0.04
USP6NL-206ENST00000609853 SMC4Q9NTJ3 1288 aa15.32■□□□□ 0.04
USP6NL-206ENST00000609853 DZIP1LQ8IYY4 767 aaKnown RBP15.31■□□□□ 0.04
USP6NL-206ENST00000609853 NGDNQ8NEJ9 315 aaKnown RBP15.31■□□□□ 0.04
USP6NL-206ENST00000609853 PHACTR3Q96KR7 559 aa15.31■□□□□ 0.04
USP6NL-206ENST00000609853 USP54Q70EL1 1684 aa15.31■□□□□ 0.04
USP6NL-206ENST00000609853 MVPQ14764 893 aaKnown RBP15.31■□□□□ 0.04
USP6NL-206ENST00000609853 FTSJ3Q8IY81 847 aaKnown RBP15.31■□□□□ 0.04
USP6NL-206ENST00000609853 KIF24Q5T7B8 1368 aa15.3■□□□□ 0.04
USP6NL-206ENST00000609853 RGPD1P0DJD0 1748 aa15.3■□□□□ 0.04
USP6NL-206ENST00000609853 KCNA6P17658 529 aa15.3■□□□□ 0.04
USP6NL-206ENST00000609853 SSH1Q8WYL5 1049 aa15.3■□□□□ 0.04
USP6NL-206ENST00000609853 NUTM2FA1L443 756 aa15.29■□□□□ 0.04
USP6NL-206ENST00000609853 ZNF853P0CG23 659 aa15.29■□□□□ 0.04
USP6NL-206ENST00000609853 EIF4A2Q14240 407 aaKnown RBP15.29■□□□□ 0.04
USP6NL-206ENST00000609853 ATF7IPQ6VMQ6 1270 aa15.29■□□□□ 0.04
USP6NL-206ENST00000609853 BCL2L13Q9BXK5 485 aa15.29■□□□□ 0.04
USP6NL-206ENST00000609853 RLBP1P12271 317 aa15.29■□□□□ 0.04
USP6NL-206ENST00000609853 ERICH6Q7L0X2 663 aa15.29■□□□□ 0.04
USP6NL-206ENST00000609853 IPO9Q96P70 1041 aaKnown RBP15.29■□□□□ 0.04
USP6NL-206ENST00000609853 SBNO1A3KN83 1393 aa15.28■□□□□ 0.04
USP6NL-206ENST00000609853 PEAK1Q9H792 1746 aa15.28■□□□□ 0.04
USP6NL-206ENST00000609853 CFAP44Q96MT7 982 aa15.28■□□□□ 0.04
USP6NL-206ENST00000609853 RWDD1Q9H446 243 aaPredicted RBP15.28■□□□□ 0.04
USP6NL-206ENST00000609853 DDX19BQ9UMR2 479 aa15.28■□□□□ 0.04
USP6NL-206ENST00000609853 ARHGEF10O15013 1369 aa15.28■□□□□ 0.04
USP6NL-206ENST00000609853 FLT4P35916 1363 aa15.28■□□□□ 0.04
USP6NL-206ENST00000609853 HAP1P54257 671 aaPredicted RBP15.27■□□□□ 0.04
USP6NL-206ENST00000609853 PIK3C2AO00443 1686 aa15.27■□□□□ 0.03
USP6NL-206ENST00000609853 IGHDP01880 384 aa15.26■□□□□ 0.03
USP6NL-206ENST00000609853 FAM161AQ3B820 660 aa15.26■□□□□ 0.03
USP6NL-206ENST00000609853 ARHGAP45Q92619 1136 aa15.26■□□□□ 0.03
USP6NL-206ENST00000609853 CHMP4BQ9H444 224 aaKnown RBP15.26■□□□□ 0.03
USP6NL-206ENST00000609853 TRIM27P14373 513 aa15.26■□□□□ 0.03
USP6NL-206ENST00000609853 SULT6B1Q6IMI4 303 aa15.25■□□□□ 0.03
USP6NL-206ENST00000609853 MAP3K19Q56UN5 1328 aa15.24■□□□□ 0.03
USP6NL-206ENST00000609853 NOB1Q9ULX3 412 aaKnown RBP15.24■□□□□ 0.03
USP6NL-206ENST00000609853 HSP90AB2PQ58FF8 381 aa15.23■□□□□ 0.03
USP6NL-206ENST00000609853 NOP58Q9Y2X3 529 aaKnown RBP15.23■□□□□ 0.03
USP6NL-206ENST00000609853 VAMP4O75379 141 aa15.23■□□□□ 0.03
USP6NL-206ENST00000609853 LAS1LQ9Y4W2 734 aaKnown RBP15.23■□□□□ 0.03
USP6NL-206ENST00000609853 PCDHB15Q9Y5E8 787 aa15.23■□□□□ 0.03
USP6NL-206ENST00000609853 ADGRL3Q9HAR2 1447 aa15.22■□□□□ 0.03
USP6NL-206ENST00000609853 KDRP35968 1356 aa15.22■□□□□ 0.03
USP6NL-206ENST00000609853 MBIPQ9NS73 344 aa15.22■□□□□ 0.03
USP6NL-206ENST00000609853 TNNQ9UQP3 1299 aa15.22■□□□□ 0.03
USP6NL-206ENST00000609853 VIRMAQ69YN4 1812 aaKnown RBP15.22■□□□□ 0.03
USP6NL-206ENST00000609853 NPHP4O75161 1426 aaPredicted RBP15.22■□□□□ 0.03
USP6NL-206ENST00000609853 AMPHP49418 695 aa15.21■□□□□ 0.03
USP6NL-206ENST00000609853 NLRP6P59044 892 aa15.21■□□□□ 0.03
USP6NL-206ENST00000609853 HDAC1Q13547 482 aaPredicted RBP15.21■□□□□ 0.03
USP6NL-206ENST00000609853 MARF1Q9Y4F3 1742 aaKnown RBP15.21■□□□□ 0.03
USP6NL-206ENST00000609853 ZBTB47Q9UFB7 747 aaPredicted RBP15.2■□□□□ 0.02
USP6NL-206ENST00000609853 PHF8Q9UPP1 1060 aa15.2■□□□□ 0.02
USP6NL-206ENST00000609853 RGS3P49796 1198 aa15.2■□□□□ 0.02
USP6NL-206ENST00000609853 AEBP1Q8IUX7 1158 aa15.2■□□□□ 0.02
USP6NL-206ENST00000609853 ITPRIPQ8IWB1 547 aa15.2■□□□□ 0.02
USP6NL-206ENST00000609853 DDRGK1Q96HY6 314 aa15.2■□□□□ 0.02
USP6NL-206ENST00000609853 THUMPD2Q9BTF0 503 aaKnown RBP15.2■□□□□ 0.02
USP6NL-206ENST00000609853 RTL1A6NKG5 1358 aa15.19■□□□□ 0.02
USP6NL-206ENST00000609853 IGSF1Q8N6C5 1336 aa15.19■□□□□ 0.02
USP6NL-206ENST00000609853 TWISTNBQ3B726 338 aaPredicted RBP15.19■□□□□ 0.02
USP6NL-206ENST00000609853 C8orf34Q49A92 452 aa15.19■□□□□ 0.02
USP6NL-206ENST00000609853 SKAP1Q86WV1 359 aa15.19■□□□□ 0.02
USP6NL-206ENST00000609853 MRPL50Q8N5N7 158 aaKnown RBP15.19■□□□□ 0.02
USP6NL-206ENST00000609853 KIAA0232Q92628 1395 aa15.19■□□□□ 0.02
USP6NL-206ENST00000609853 NWD1Q149M9 1564 aa15.19■□□□□ 0.02
USP6NL-206ENST00000609853 HTATSF1O43719 755 aaKnown RBP15.18■□□□□ 0.02
USP6NL-206ENST00000609853 CHL1O00533 1208 aa15.17■□□□□ 0.02
USP6NL-206ENST00000609853 TMEM57Q8N5G2 664 aa15.17■□□□□ 0.02
USP6NL-206ENST00000609853 ABTB2Q8N961 1025 aa15.17■□□□□ 0.02
USP6NL-206ENST00000609853 GAS2L2Q8NHY3 880 aa15.17■□□□□ 0.02
USP6NL-206ENST00000609853 ZBTB40Q9NUA8 1239 aa15.17■□□□□ 0.02
USP6NL-206ENST00000609853 API5Q9BZZ5 524 aaKnown RBP15.17■□□□□ 0.02
USP6NL-206ENST00000609853 FAM83GA6ND36 823 aa15.15■□□□□ 0.02
USP6NL-206ENST00000609853 SOX12O15370 315 aa15.15■□□□□ 0.02
USP6NL-206ENST00000609853 HOXC9P31274 260 aa15.15■□□□□ 0.02
USP6NL-206ENST00000609853 TSPYL6Q8N831 410 aa15.15■□□□□ 0.02
USP6NL-206ENST00000609853 NPM2Q86SE8 214 aaKnown RBP15.14■□□□□ 0.01
USP6NL-206ENST00000609853 C8orf58Q8NAV2 365 aa15.14■□□□□ 0.01
USP6NL-206ENST00000609853 RTF1Q92541 710 aaKnown RBP15.14■□□□□ 0.01
USP6NL-206ENST00000609853 EYA1Q99502 592 aa15.14■□□□□ 0.01
USP6NL-206ENST00000609853 ABCC4O15439 1325 aa15.14■□□□□ 0.01
USP6NL-206ENST00000609853 CRB1P82279 1406 aa15.14■□□□□ 0.01
USP6NL-206ENST00000609853 KCNH5Q8NCM2 988 aa15.14■□□□□ 0.01
USP6NL-206ENST00000609853 PDZRN3Q9UPQ7 1066 aa15.14■□□□□ 0.01
USP6NL-206ENST00000609853 PHRF1Q9P1Y6 1649 aaKnown RBP15.14■□□□□ 0.01
USP6NL-206ENST00000609853 PAK3O75914 559 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms