RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 PARP4Q9UKK3 1724 aaKnown RBP22.63■■□□□ 1.21
HDDC2-210ENST00000609574 ARHGEF25Q86VW2 580 aa22.63■■□□□ 1.21
HDDC2-210ENST00000609574 MARCH10Q8NA82 808 aaPredicted RBP22.63■■□□□ 1.21
HDDC2-210ENST00000609574 AXIN2Q9Y2T1 843 aa22.63■■□□□ 1.21
HDDC2-210ENST00000609574 NUP188Q5SRE5 1749 aa22.62■■□□□ 1.21
HDDC2-210ENST00000609574 TTC21BQ7Z4L5 1316 aa22.62■■□□□ 1.21
HDDC2-210ENST00000609574 TTC21AQ8NDW8 1320 aa22.61■■□□□ 1.21
HDDC2-210ENST00000609574 L3MBTL2Q969R5 705 aa22.61■■□□□ 1.21
HDDC2-210ENST00000609574 SLIT3O75094 1523 aa22.59■■□□□ 1.21
HDDC2-210ENST00000609574 ZBTB7AO95365 584 aa22.59■■□□□ 1.21
HDDC2-210ENST00000609574 CPSF1Q10570 1443 aaKnown RBP22.58■■□□□ 1.21
HDDC2-210ENST00000609574 TXNRD1Q16881 649 aa22.58■■□□□ 1.21
HDDC2-210ENST00000609574 ANO8Q9HCE9 1232 aaPredicted RBP22.58■■□□□ 1.21
HDDC2-210ENST00000609574 BCL9O00512 1426 aa22.57■■□□□ 1.2
HDDC2-210ENST00000609574 ROCK2O75116 1388 aaKnown RBP22.56■■□□□ 1.2
HDDC2-210ENST00000609574 CCDC7Q96M83 1385 aa22.56■■□□□ 1.2
HDDC2-210ENST00000609574 PTF1AQ7RTS3 328 aa22.56■■□□□ 1.2
HDDC2-210ENST00000609574 PROM2Q8N271 834 aa22.56■■□□□ 1.2
HDDC2-210ENST00000609574 ATF5Q9Y2D1 282 aaPredicted RBP22.56■■□□□ 1.2
HDDC2-210ENST00000609574 KTN1Q86UP2 1357 aaKnown RBP22.55■■□□□ 1.2
HDDC2-210ENST00000609574 SLC15A2Q16348 729 aa22.55■■□□□ 1.2
HDDC2-210ENST00000609574 QRICH2Q9H0J4 1663 aa22.55■■□□□ 1.2
HDDC2-210ENST00000609574 NEUROD1Q13562 356 aa22.53■■□□□ 1.2
HDDC2-210ENST00000609574 NLRP2Q9NX02 1062 aa22.53■■□□□ 1.2
HDDC2-210ENST00000609574 LRRC37A3O60309 1634 aa22.52■■□□□ 1.2
HDDC2-210ENST00000609574 PEAK1Q9H792 1746 aa22.51■■□□□ 1.19
HDDC2-210ENST00000609574 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.51■■□□□ 1.19
HDDC2-210ENST00000609574 MTFR1LQ9H019 292 aa22.51■■□□□ 1.19
HDDC2-210ENST00000609574 RGPD3A6NKT7 1758 aaPredicted RBP22.5■■□□□ 1.19
HDDC2-210ENST00000609574 RGPD4Q7Z3J3 1758 aa22.5■■□□□ 1.19
HDDC2-210ENST00000609574 PDGFDQ9GZP0 370 aaPredicted RBP22.5■■□□□ 1.19
HDDC2-210ENST00000609574 HDGFL2Q7Z4V5 671 aaPredicted RBP22.49■■□□□ 1.19
HDDC2-210ENST00000609574 TMC1Q8TDI8 760 aa22.49■■□□□ 1.19
HDDC2-210ENST00000609574 IL2RBP14784 551 aa22.48■■□□□ 1.19
HDDC2-210ENST00000609574 PTGER2P43116 358 aa22.48■■□□□ 1.19
HDDC2-210ENST00000609574 ACSBG1Q96GR2 724 aa22.48■■□□□ 1.19
HDDC2-210ENST00000609574 PIK3C2AO00443 1686 aa22.48■■□□□ 1.19
HDDC2-210ENST00000609574 TRPM1Q7Z4N2 1603 aa22.47■■□□□ 1.19
HDDC2-210ENST00000609574 SIN3AQ96ST3 1273 aa22.47■■□□□ 1.19
HDDC2-210ENST00000609574 COL18A1P39060 1754 aa22.46■■□□□ 1.19
HDDC2-210ENST00000609574 SYT17Q9BSW7 474 aa22.46■■□□□ 1.19
HDDC2-210ENST00000609574 FHDC1Q9C0D6 1143 aaPredicted RBP22.46■■□□□ 1.19
HDDC2-210ENST00000609574 SBF2Q86WG5 1849 aa22.45■■□□□ 1.18
HDDC2-210ENST00000609574 TNS2Q63HR2 1409 aa22.43■■□□□ 1.18
HDDC2-210ENST00000609574 ERBB3P21860 1342 aa22.43■■□□□ 1.18
HDDC2-210ENST00000609574 ANKRD24Q8TF21 1146 aa22.43■■□□□ 1.18
HDDC2-210ENST00000609574 ARXQ96QS3 562 aa22.43■■□□□ 1.18
HDDC2-210ENST00000609574 TERF2IPQ9NYB0 399 aa22.43■■□□□ 1.18
HDDC2-210ENST00000609574 CARD11Q9BXL7 1154 aa22.42■■□□□ 1.18
HDDC2-210ENST00000609574 USP31Q70CQ4 1352 aa22.41■■□□□ 1.18
HDDC2-210ENST00000609574 AKAP12Q02952 1782 aa22.41■■□□□ 1.18
HDDC2-210ENST00000609574 NME9Q86XW9 330 aa22.41■■□□□ 1.18
HDDC2-210ENST00000609574 ABCC6O95255 1503 aa22.4■■□□□ 1.18
HDDC2-210ENST00000609574 ZNF784Q8NCA9 323 aaPredicted RBP22.39■■□□□ 1.17
HDDC2-210ENST00000609574 NFAT5O94916 1531 aa22.39■■□□□ 1.17
HDDC2-210ENST00000609574 CASZ1Q86V15 1759 aa22.39■■□□□ 1.17
HDDC2-210ENST00000609574 DDX54Q8TDD1 881 aaKnown RBP22.38■■□□□ 1.17
HDDC2-210ENST00000609574 POLD1P28340 1107 aa22.37■■□□□ 1.17
HDDC2-210ENST00000609574 SLC27A3Q5K4L6 730 aa22.37■■□□□ 1.17
HDDC2-210ENST00000609574 WNK3Q9BYP7 1800 aa22.36■■□□□ 1.17
HDDC2-210ENST00000609574 GPR162Q16538 588 aa22.36■■□□□ 1.17
HDDC2-210ENST00000609574 SLC16A10Q8TF71 515 aa22.36■■□□□ 1.17
HDDC2-210ENST00000609574 SLC12A5Q9H2X9 1139 aa22.36■■□□□ 1.17
HDDC2-210ENST00000609574 SGIP1Q9BQI5 828 aa22.35■■□□□ 1.17
HDDC2-210ENST00000609574 SBNO2Q9Y2G9 1366 aa22.35■■□□□ 1.17
HDDC2-210ENST00000609574 RGPD5Q99666 1765 aa22.35■■□□□ 1.17
HDDC2-210ENST00000609574 KLHL34Q8N239 644 aa22.34■■□□□ 1.17
HDDC2-210ENST00000609574 LTV1Q96GA3 475 aaPredicted RBP22.34■■□□□ 1.17
HDDC2-210ENST00000609574 IP6K1Q92551 441 aa22.33■■□□□ 1.17
HDDC2-210ENST00000609574 SYTL4Q96C24 671 aaPredicted RBP22.33■■□□□ 1.17
HDDC2-210ENST00000609574 MYOM1P52179 1685 aa22.33■■□□□ 1.16
HDDC2-210ENST00000609574 SLC24A1O60721 1099 aa22.32■■□□□ 1.16
HDDC2-210ENST00000609574 PUS7Q96PZ0 661 aaKnown RBP22.32■■□□□ 1.16
HDDC2-210ENST00000609574 TFCP2L1Q9NZI6 479 aa22.32■■□□□ 1.16
HDDC2-210ENST00000609574 EDC4Q6P2E9 1401 aaKnown RBP22.31■■□□□ 1.16
HDDC2-210ENST00000609574 AMPHP49418 695 aa22.3■■□□□ 1.16
HDDC2-210ENST00000609574 ZNF827Q17R98 1081 aa22.3■■□□□ 1.16
HDDC2-210ENST00000609574 COG3Q96JB2 828 aa22.3■■□□□ 1.16
HDDC2-210ENST00000609574 LRRC4BQ9NT99 713 aa22.3■■□□□ 1.16
HDDC2-210ENST00000609574 NHSQ6T4R5 1651 aa22.3■■□□□ 1.16
HDDC2-210ENST00000609574 PELP1Q8IZL8 1130 aaKnown RBP22.29■■□□□ 1.16
HDDC2-210ENST00000609574 MAP3K5Q99683 1374 aa22.28■■□□□ 1.16
HDDC2-210ENST00000609574 HMGB2P26583 209 aaKnown RBP22.28■■□□□ 1.16
HDDC2-210ENST00000609574 AKT1S1Q96B36 256 aa22.28■■□□□ 1.16
HDDC2-210ENST00000609574 KAT6BQ8WYB5 2073 aa22.27■■□□□ 1.16
HDDC2-210ENST00000609574 PRIM1P49642 420 aaKnown RBP22.27■■□□□ 1.16
HDDC2-210ENST00000609574 SENP3-EIF4A1A0A087X0R7 540 aa22.26■■□□□ 1.15
HDDC2-210ENST00000609574 ZCRB1Q8TBF4 217 aaKnown RBP22.26■■□□□ 1.15
HDDC2-210ENST00000609574 MON2Q7Z3U7 1717 aa22.26■■□□□ 1.15
HDDC2-210ENST00000609574 MSH5O43196 834 aa22.25■■□□□ 1.15
HDDC2-210ENST00000609574 C1QTNF8P60827 252 aa22.25■■□□□ 1.15
HDDC2-210ENST00000609574 CD163L1Q9NR16 1453 aa22.24■■□□□ 1.15
HDDC2-210ENST00000609574 A0A1W2PP64 1363 aa22.24■■□□□ 1.15
HDDC2-210ENST00000609574 TONSLQ96HA7 1378 aa22.24■■□□□ 1.15
HDDC2-210ENST00000609574 UTRNP46939 3433 aa22.21■■□□□ 1.15
HDDC2-210ENST00000609574 HOXC9P31274 260 aa22.21■■□□□ 1.15
HDDC2-210ENST00000609574 CCNL1Q9UK58 526 aaPredicted RBP22.21■■□□□ 1.15
HDDC2-210ENST00000609574 PNPLA7Q6ZV29 1317 aa22.21■■□□□ 1.15
HDDC2-210ENST00000609574 ANKRD36BQ8N2N9 1353 aa22.21■■□□□ 1.15
HDDC2-210ENST00000609574 GRIN3BO60391 1043 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms