RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 PRDM11Q9NQV5 511 aa12.65□□□□□ -0.39
CTCFL-216ENST00000608263 CCDC27Q2M243 656 aa12.64□□□□□ -0.39
CTCFL-216ENST00000608263 CFAP65Q6ZU64 1925 aaKnown RBP12.64□□□□□ -0.39
CTCFL-216ENST00000608263 ZNF521Q96K83 1311 aa12.64□□□□□ -0.39
CTCFL-216ENST00000608263 SHANK2Q9UPX8 1470 aa12.64□□□□□ -0.39
CTCFL-216ENST00000608263 TULP1O00294 542 aaPredicted RBP12.64□□□□□ -0.39
CTCFL-216ENST00000608263 SYAP1Q96A49 352 aaPredicted RBP12.64□□□□□ -0.39
CTCFL-216ENST00000608263 PHACTR3Q96KR7 559 aa12.64□□□□□ -0.39
CTCFL-216ENST00000608263 IL1RAPL2Q9NP60 686 aa12.64□□□□□ -0.39
CTCFL-216ENST00000608263 CCDC61Q9Y6R9 512 aa12.64□□□□□ -0.39
CTCFL-216ENST00000608263 POLR3AO14802 1390 aaPredicted RBP12.63□□□□□ -0.39
CTCFL-216ENST00000608263 ADAMTS2O95450 1211 aa12.63□□□□□ -0.39
CTCFL-216ENST00000608263 UPF3BQ9BZI7 483 aaKnown RBP12.63□□□□□ -0.39
CTCFL-216ENST00000608263 RTEL1-TNFRSF6BF6WH68 1400 aa12.63□□□□□ -0.39
CTCFL-216ENST00000608263 RABEP1Q15276 862 aa12.63□□□□□ -0.39
CTCFL-216ENST00000608263 ISY1Q9ULR0 285 aaKnown RBP12.63□□□□□ -0.39
CTCFL-216ENST00000608263 PLCH2O75038 1416 aa12.63□□□□□ -0.39
CTCFL-216ENST00000608263 FAM177BA6PVY3 158 aa12.63□□□□□ -0.39
CTCFL-216ENST00000608263 PLA2R1Q13018 1463 aa12.63□□□□□ -0.39
CTCFL-216ENST00000608263 LARP6Q9BRS8 491 aaKnown RBP12.62□□□□□ -0.39
CTCFL-216ENST00000608263 GORABQ5T7V8 394 aa12.62□□□□□ -0.39
CTCFL-216ENST00000608263 KLHL34Q8N239 644 aa12.62□□□□□ -0.39
CTCFL-216ENST00000608263 MBIPQ9NS73 344 aa12.62□□□□□ -0.39
CTCFL-216ENST00000608263 TOM1L2Q6ZVM7 507 aa12.62□□□□□ -0.39
CTCFL-216ENST00000608263 C8orf58Q8NAV2 365 aa12.61□□□□□ -0.39
CTCFL-216ENST00000608263 DUOX2Q9NRD8 1548 aa12.61□□□□□ -0.39
CTCFL-216ENST00000608263 VPS37CA5D8V6 355 aaPredicted RBP12.61□□□□□ -0.39
CTCFL-216ENST00000608263 SURF6O75683 361 aaKnown RBP12.61□□□□□ -0.39
CTCFL-216ENST00000608263 NCKAP5LQ9HCH0 1330 aa12.61□□□□□ -0.39
CTCFL-216ENST00000608263 NUCB1Q02818 461 aa12.6□□□□□ -0.39
CTCFL-216ENST00000608263 HDAC1Q13547 482 aaPredicted RBP12.6□□□□□ -0.39
CTCFL-216ENST00000608263 ZRSR1Q15695 479 aaKnown RBP12.6□□□□□ -0.39
CTCFL-216ENST00000608263 ATAD2Q6PL18 1390 aa12.6□□□□□ -0.39
CTCFL-216ENST00000608263 ABCC10Q5T3U5 1492 aa12.6□□□□□ -0.39
CTCFL-216ENST00000608263 TRMT2AQ8IZ69 625 aaKnown RBP12.6□□□□□ -0.39
CTCFL-216ENST00000608263 GDPD2Q9HCC8 539 aa12.6□□□□□ -0.39
CTCFL-216ENST00000608263 ZBTB40Q9NUA8 1239 aa12.6□□□□□ -0.39
CTCFL-216ENST00000608263 RBM27Q9P2N5 1060 aaKnown RBP12.6□□□□□ -0.39
CTCFL-216ENST00000608263 GAS2L2Q8NHY3 880 aa12.59□□□□□ -0.39
CTCFL-216ENST00000608263 KAT6BQ8WYB5 2073 aa12.59□□□□□ -0.39
CTCFL-216ENST00000608263 SYCE3A1L190 88 aa12.59□□□□□ -0.39
CTCFL-216ENST00000608263 BMP2KLQ5H9B9 411 aa12.59□□□□□ -0.39
CTCFL-216ENST00000608263 DIAPH3Q9NSV4 1193 aa12.59□□□□□ -0.39
CTCFL-216ENST00000608263 TRIM35Q9UPQ4 493 aa12.59□□□□□ -0.39
CTCFL-216ENST00000608263 RPGRIP1LQ68CZ1 1315 aa12.59□□□□□ -0.39
CTCFL-216ENST00000608263 USHBP1Q8N6Y0 703 aa12.59□□□□□ -0.39
CTCFL-216ENST00000608263 FOSBP53539 338 aa12.58□□□□□ -0.4
CTCFL-216ENST00000608263 ALDH1L2Q3SY69 923 aa12.58□□□□□ -0.4
CTCFL-216ENST00000608263 WDR7Q9Y4E6 1490 aa12.58□□□□□ -0.4
CTCFL-216ENST00000608263 ERC2O15083 957 aa12.58□□□□□ -0.4
CTCFL-216ENST00000608263 FIBPO43427 364 aa12.58□□□□□ -0.4
CTCFL-216ENST00000608263 AEBP1Q8IUX7 1158 aa12.58□□□□□ -0.4
CTCFL-216ENST00000608263 SMC5Q8IY18 1101 aa12.58□□□□□ -0.4
CTCFL-216ENST00000608263 UBTFL1P0CB47 393 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-216ENST00000608263 CHAF1AQ13111 956 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-216ENST00000608263 CIZ1Q9ULV3 898 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-216ENST00000608263 OTUD7AQ8TE49 926 aaPredicted RBP12.57□□□□□ -0.4
CTCFL-216ENST00000608263 C9orf78Q9NZ63 289 aaPredicted RBP12.57□□□□□ -0.4
CTCFL-216ENST00000608263 DTNBO60941 627 aa12.57□□□□□ -0.4
CTCFL-216ENST00000608263 BAG4O95429 457 aaKnown RBP12.57□□□□□ -0.4
CTCFL-216ENST00000608263 HSP90B1P14625 803 aaKnown RBP12.57□□□□□ -0.4
CTCFL-216ENST00000608263 MEIS3Q99687 375 aa12.57□□□□□ -0.4
CTCFL-216ENST00000608263 NUTM1Q86Y26 1132 aa12.56□□□□□ -0.4
CTCFL-216ENST00000608263 POLKQ9UBT6 870 aa12.56□□□□□ -0.4
CTCFL-216ENST00000608263 PPP6R1Q9UPN7 881 aa12.56□□□□□ -0.4
CTCFL-216ENST00000608263 GNAI2P04899 355 aa12.56□□□□□ -0.4
CTCFL-216ENST00000608263 USP19O94966 1318 aa12.56□□□□□ -0.4
CTCFL-216ENST00000608263 VAMP4O75379 141 aa12.56□□□□□ -0.4
CTCFL-216ENST00000608263 CCDC173Q0VFZ6 552 aa12.56□□□□□ -0.4
CTCFL-216ENST00000608263 SMC3Q9UQE7 1217 aa12.55□□□□□ -0.4
CTCFL-216ENST00000608263 ADGBQ8N7X0 1667 aa12.55□□□□□ -0.4
CTCFL-216ENST00000608263 A0A1W2PP64 1363 aa12.55□□□□□ -0.4
CTCFL-216ENST00000608263 FBXW7Q969H0 707 aa12.55□□□□□ -0.4
CTCFL-216ENST00000608263 ANKRD36BQ8N2N9 1353 aa12.55□□□□□ -0.4
CTCFL-216ENST00000608263 IFT57Q9NWB7 429 aa12.55□□□□□ -0.4
CTCFL-216ENST00000608263 ZGPATQ8N5A5 531 aaKnown RBP12.54□□□□□ -0.4
CTCFL-216ENST00000608263 PHF14O94880 888 aa12.54□□□□□ -0.4
CTCFL-216ENST00000608263 SDSP20132 328 aa12.54□□□□□ -0.4
CTCFL-216ENST00000608263 CHRNA2Q15822 529 aa12.54□□□□□ -0.4
CTCFL-216ENST00000608263 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-216ENST00000608263 MRPL50Q8N5N7 158 aaKnown RBP12.54□□□□□ -0.4
CTCFL-216ENST00000608263 PKNOX2Q96KN3 472 aa12.54□□□□□ -0.4
CTCFL-216ENST00000608263 ZNF692Q9BU19 519 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-216ENST00000608263 LRRCC1Q9C099 1032 aa12.54□□□□□ -0.4
CTCFL-216ENST00000608263 CHAMP1Q96JM3 812 aa12.53□□□□□ -0.4
CTCFL-216ENST00000608263 PHF8Q9UPP1 1060 aa12.53□□□□□ -0.4
CTCFL-216ENST00000608263 KDM5DQ9BY66 1539 aa12.53□□□□□ -0.4
CTCFL-216ENST00000608263 EIF2AK4Q9P2K8 1649 aaKnown RBP12.53□□□□□ -0.4
CTCFL-216ENST00000608263 ZNF530Q6P9A1 599 aaPredicted RBP12.53□□□□□ -0.4
CTCFL-216ENST00000608263 RPAP2Q8IXW5 612 aaPredicted RBP12.53□□□□□ -0.4
CTCFL-216ENST00000608263 ABCC11Q96J66 1382 aa12.53□□□□□ -0.4
CTCFL-216ENST00000608263 UGGT1Q9NYU2 1555 aa12.53□□□□□ -0.4
CTCFL-216ENST00000608263 IFIT2P09913 472 aaKnown RBP12.53□□□□□ -0.4
CTCFL-216ENST00000608263 HSP90AB2PQ58FF8 381 aa12.53□□□□□ -0.4
CTCFL-216ENST00000608263 PTPRTO14522 1441 aa12.53□□□□□ -0.4
CTCFL-216ENST00000608263 G3V3G9 751 aa12.53□□□□□ -0.4
CTCFL-216ENST00000608263 DCAF8Q5TAQ9 597 aa12.53□□□□□ -0.4
CTCFL-216ENST00000608263 HDGFL1Q5TGJ6 251 aa12.53□□□□□ -0.4
CTCFL-216ENST00000608263 ZBTB7BO15156 539 aaPredicted RBP12.52□□□□□ -0.4
CTCFL-216ENST00000608263 NPC1L1Q9UHC9 1359 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms