RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	ZNF692	Q9BU19	519 aa	Predicted RBP	30.23	■■■□□ 2.43
NECAB3-222	ENST00000607805	ARHGEF25	Q86VW2	580 aa		30.22	■■■□□ 2.43
NECAB3-222	ENST00000607805	USP54	Q70EL1	1684 aa		30.22	■■■□□ 2.43
NECAB3-222	ENST00000607805	NFAT5	O94916	1531 aa		30.22	■■■□□ 2.43
NECAB3-222	ENST00000607805	WDR17	Q8IZU2	1322 aa		30.22	■■■□□ 2.43
NECAB3-222	ENST00000607805	ZBTB7C	A1YPR0	619 aa		30.21	■■■□□ 2.43
NECAB3-222	ENST00000607805	ROCK2	O75116	1388 aa	Known RBP	30.2	■■■□□ 2.43
NECAB3-222	ENST00000607805	NBPF14	Q5TI25	921 aa		30.19	■■■□□ 2.42
NECAB3-222	ENST00000607805	DDB1	Q16531	1140 aa		30.18	■■■□□ 2.42
NECAB3-222	ENST00000607805	TOM1L2	Q6ZVM7	507 aa		30.18	■■■□□ 2.42
NECAB3-222	ENST00000607805	BCL9	O00512	1426 aa		30.18	■■■□□ 2.42
NECAB3-222	ENST00000607805	TTC21A	Q8NDW8	1320 aa		30.18	■■■□□ 2.42
NECAB3-222	ENST00000607805	PLSCR1	O15162	318 aa		30.17	■■■□□ 2.42
NECAB3-222	ENST00000607805	ABCC6	O95255	1503 aa		30.17	■■■□□ 2.42
NECAB3-222	ENST00000607805	CASZ1	Q86V15	1759 aa		30.15	■■■□□ 2.42
NECAB3-222	ENST00000607805	KCNH5	Q8NCM2	988 aa		30.15	■■■□□ 2.42
NECAB3-222	ENST00000607805	MARCH10	Q8NA82	808 aa	Predicted RBP	30.14	■■■□□ 2.42
NECAB3-222	ENST00000607805	SBNO2	Q9Y2G9	1366 aa		30.14	■■■□□ 2.41
NECAB3-222	ENST00000607805	LTN1	O94822	1766 aa		30.13	■■■□□ 2.41
NECAB3-222	ENST00000607805	PTF1A	Q7RTS3	328 aa		30.13	■■■□□ 2.41
NECAB3-222	ENST00000607805	CDCA7	Q9BWT1	371 aa	Predicted RBP	30.13	■■■□□ 2.41
NECAB3-222	ENST00000607805	CARD10	Q9BWT7	1032 aa		30.12	■■■□□ 2.41
NECAB3-222	ENST00000607805	BCL11B	Q9C0K0	894 aa	Predicted RBP	30.12	■■■□□ 2.41
NECAB3-222	ENST00000607805	KTN1	Q86UP2	1357 aa	Known RBP	30.11	■■■□□ 2.41
NECAB3-222	ENST00000607805	NEUROD1	Q13562	356 aa		30.1	■■■□□ 2.41
NECAB3-222	ENST00000607805	CD163L1	Q9NR16	1453 aa		30.1	■■■□□ 2.41
NECAB3-222	ENST00000607805	USP31	Q70CQ4	1352 aa		30.08	■■■□□ 2.41
NECAB3-222	ENST00000607805	KAT6B	Q8WYB5	2073 aa		30.08	■■■□□ 2.41
NECAB3-222	ENST00000607805	PROM2	Q8N271	834 aa		30.07	■■■□□ 2.4
NECAB3-222	ENST00000607805	KCNQ2	O43526	872 aa		30.06	■■■□□ 2.4
NECAB3-222	ENST00000607805	SPON1	Q9HCB6	807 aa		30.06	■■■□□ 2.4
NECAB3-222	ENST00000607805	ANO8	Q9HCE9	1232 aa	Predicted RBP	30.06	■■■□□ 2.4
NECAB3-222	ENST00000607805	SOX12	O15370	315 aa		30.05	■■■□□ 2.4
NECAB3-222	ENST00000607805	CCDC7	Q96M83	1385 aa		30.03	■■■□□ 2.4
NECAB3-222	ENST00000607805	NHS	Q6T4R5	1651 aa		30.03	■■■□□ 2.4
NECAB3-222	ENST00000607805	CSB-PGBD3	P0DP91	1061 aa		30.01	■■■□□ 2.39
NECAB3-222	ENST00000607805	TNS2	Q63HR2	1409 aa		30.01	■■■□□ 2.39
NECAB3-222	ENST00000607805	UTRN	P46939	3433 aa		29.99	■■■□□ 2.39
NECAB3-222	ENST00000607805	EXOC5	O00471	708 aa		29.99	■■■□□ 2.39
NECAB3-222	ENST00000607805	NINL	Q9Y2I6	1382 aa		29.98	■■■□□ 2.39
NECAB3-222	ENST00000607805	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	29.97	■■■□□ 2.39	3e-6	■□□□□ 9.1
NECAB3-222	ENST00000607805	ERBB3	P21860	1342 aa		29.96	■■■□□ 2.39
NECAB3-222	ENST00000607805	NME9	Q86XW9	330 aa		29.96	■■■□□ 2.39
NECAB3-222	ENST00000607805	PDGFD	Q9GZP0	370 aa	Predicted RBP	29.96	■■■□□ 2.39
NECAB3-222	ENST00000607805	BTAF1	O14981	1849 aa		29.96	■■■□□ 2.39
NECAB3-222	ENST00000607805	CARD11	Q9BXL7	1154 aa		29.95	■■■□□ 2.39
NECAB3-222	ENST00000607805	MYOM1	P52179	1685 aa		29.93	■■■□□ 2.38
NECAB3-222	ENST00000607805	TXNRD1	Q16881	649 aa		29.93	■■■□□ 2.38
NECAB3-222	ENST00000607805	PPP1R1B	Q9UD71	204 aa	Predicted RBP	29.93	■■■□□ 2.38
NECAB3-222	ENST00000607805	EDC4	Q6P2E9	1401 aa	Known RBP	29.93	■■■□□ 2.38
NECAB3-222	ENST00000607805	SLC12A5	Q9H2X9	1139 aa		29.92	■■■□□ 2.38
NECAB3-222	ENST00000607805	PAPPA	Q13219	1627 aa		29.91	■■■□□ 2.38
NECAB3-222	ENST00000607805	PUS7	Q96PZ0	661 aa	Known RBP	29.9	■■■□□ 2.38
NECAB3-222	ENST00000607805	FAM208A	Q9UK61	1670 aa	Known RBP	29.9	■■■□□ 2.38
NECAB3-222	ENST00000607805		A0A1W2PP64	1363 aa		29.89	■■■□□ 2.37
NECAB3-222	ENST00000607805	PTGER2	P43116	358 aa		29.87	■■■□□ 2.37
NECAB3-222	ENST00000607805	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	29.87	■■■□□ 2.37
NECAB3-222	ENST00000607805	TMC1	Q8TDI8	760 aa		29.87	■■■□□ 2.37
NECAB3-222	ENST00000607805	NLRP2	Q9NX02	1062 aa		29.87	■■■□□ 2.37
NECAB3-222	ENST00000607805	SLC15A2	Q16348	729 aa		29.86	■■■□□ 2.37
NECAB3-222	ENST00000607805	IL2RB	P14784	551 aa		29.85	■■■□□ 2.37
NECAB3-222	ENST00000607805	ANKRD24	Q8TF21	1146 aa		29.85	■■■□□ 2.37
NECAB3-222	ENST00000607805	RGPD2	P0DJD1	1756 aa		29.85	■■■□□ 2.37
NECAB3-222	ENST00000607805	YY1	P25490	414 aa		29.84	■■■□□ 2.37
NECAB3-222	ENST00000607805	ZBTB7A	O95365	584 aa		29.83	■■■□□ 2.37
NECAB3-222	ENST00000607805	STK32B	Q9NY57	414 aa		29.83	■■■□□ 2.37
NECAB3-222	ENST00000607805	TERF2IP	Q9NYB0	399 aa		29.83	■■■□□ 2.37
NECAB3-222	ENST00000607805	ACSBG1	Q96GR2	724 aa		29.81	■■■□□ 2.36
NECAB3-222	ENST00000607805	TESK2	Q96S53	571 aa		29.81	■■■□□ 2.36
NECAB3-222	ENST00000607805	QSER1	Q2KHR3	1735 aa		29.81	■■■□□ 2.36
NECAB3-222	ENST00000607805	SHANK3	Q9BYB0	1731 aa		29.8	■■■□□ 2.36
NECAB3-222	ENST00000607805	TONSL	Q96HA7	1378 aa		29.79	■■■□□ 2.36
NECAB3-222	ENST00000607805	CHD4	Q14839	1912 aa		29.79	■■■□□ 2.36
NECAB3-222	ENST00000607805	SGIP1	Q9BQI5	828 aa		29.79	■■■□□ 2.36
NECAB3-222	ENST00000607805	IP6K1	Q92551	441 aa		29.78	■■■□□ 2.36
NECAB3-222	ENST00000607805	ATF5	Q9Y2D1	282 aa	Predicted RBP	29.78	■■■□□ 2.36
NECAB3-222	ENST00000607805	COL24A1	Q17RW2	1714 aa		29.76	■■■□□ 2.36
NECAB3-222	ENST00000607805	TUBGCP6	Q96RT7	1819 aa		29.75	■■■□□ 2.35
NECAB3-222	ENST00000607805	MTFR1L	Q9H019	292 aa		29.75	■■■□□ 2.35
NECAB3-222	ENST00000607805	DCAF8L1	A6NGE4	600 aa		29.74	■■■□□ 2.35
NECAB3-222	ENST00000607805	LY75	O60449	1722 aa		29.74	■■■□□ 2.35
NECAB3-222	ENST00000607805	DOT1L	Q8TEK3	1739 aa		29.72	■■■□□ 2.35
NECAB3-222	ENST00000607805	LRRC4B	Q9NT99	713 aa		29.72	■■■□□ 2.35
NECAB3-222	ENST00000607805	ST20-MTHFS	A0A0A6YYL1	179 aa		29.71	■■■□□ 2.35
NECAB3-222	ENST00000607805	GOLGB1	Q14789	3259 aa	Known RBP	29.7	■■■□□ 2.35
NECAB3-222	ENST00000607805	ZNF827	Q17R98	1081 aa		29.69	■■■□□ 2.34
NECAB3-222	ENST00000607805	SYT17	Q9BSW7	474 aa		29.69	■■■□□ 2.34
NECAB3-222	ENST00000607805	MAP3K19	Q56UN5	1328 aa		29.69	■■■□□ 2.34
NECAB3-222	ENST00000607805	FHDC1	Q9C0D6	1143 aa	Predicted RBP	29.68	■■■□□ 2.34
NECAB3-222	ENST00000607805	HOXC9	P31274	260 aa		29.66	■■■□□ 2.34
NECAB3-222	ENST00000607805	COG3	Q96JB2	828 aa		29.66	■■■□□ 2.34
NECAB3-222	ENST00000607805	FBLN1	P23142	703 aa		29.65	■■■□□ 2.34
NECAB3-222	ENST00000607805	AKT1S1	Q96B36	256 aa		29.65	■■■□□ 2.34
NECAB3-222	ENST00000607805	LTV1	Q96GA3	475 aa	Predicted RBP	29.65	■■■□□ 2.34
NECAB3-222	ENST00000607805	ANKRD36B	Q8N2N9	1353 aa		29.64	■■■□□ 2.34
NECAB3-222	ENST00000607805	MAP3K5	Q99683	1374 aa		29.64	■■■□□ 2.34
NECAB3-222	ENST00000607805	SLC24A1	O60721	1099 aa		29.64	■■■□□ 2.34
NECAB3-222	ENST00000607805	DDX54	Q8TDD1	881 aa	Known RBP	29.63	■■■□□ 2.33
NECAB3-222	ENST00000607805	KIF20B	Q96Q89	1820 aa		29.63	■■■□□ 2.33
NECAB3-222	ENST00000607805	MEGF6	O75095	1541 aa		29.62	■■■□□ 2.33

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms