RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 MPHOSPH10O00566 681 aaKnown RBP13.28□□□□□ -0.28
SHANK2-219ENST00000606715 FOSBP53539 338 aa13.28□□□□□ -0.28
SHANK2-219ENST00000606715 EXOC6Q8TAG9 804 aa13.28□□□□□ -0.28
SHANK2-219ENST00000606715 CEBPAP49715 358 aaPredicted RBP13.27□□□□□ -0.28
SHANK2-219ENST00000606715 ERC1Q8IUD2 1116 aa13.27□□□□□ -0.28
SHANK2-219ENST00000606715 TWISTNBQ3B726 338 aaPredicted RBP13.27□□□□□ -0.29
SHANK2-219ENST00000606715 UHRF1BP1LA0JNW5 1464 aa13.27□□□□□ -0.29
SHANK2-219ENST00000606715 NAP1L1P55209 391 aaKnown RBP13.26□□□□□ -0.29
SHANK2-219ENST00000606715 BICD2Q8TD16 824 aa13.26□□□□□ -0.29
SHANK2-219ENST00000606715 PHF8Q9UPP1 1060 aa13.26□□□□□ -0.29
SHANK2-219ENST00000606715 GOLGA6L3A6NEY3 463 aa13.26□□□□□ -0.29
SHANK2-219ENST00000606715 OFD1O75665 1012 aa13.26□□□□□ -0.29
SHANK2-219ENST00000606715 INTS3Q68E01 1043 aaKnown RBP13.26□□□□□ -0.29
SHANK2-219ENST00000606715 CDK5RAP3Q96JB5 506 aa13.26□□□□□ -0.29
SHANK2-219ENST00000606715 TMOD2Q9NZR1 351 aa13.26□□□□□ -0.29
SHANK2-219ENST00000606715 BICDL1Q6ZP65 573 aa13.25□□□□□ -0.29
SHANK2-219ENST00000606715 CLASRPQ8N2M8 674 aaKnown RBP13.25□□□□□ -0.29
SHANK2-219ENST00000606715 PBRM1Q86U86 1689 aa13.25□□□□□ -0.29
SHANK2-219ENST00000606715 HDGFL1Q5TGJ6 251 aa13.25□□□□□ -0.29
SHANK2-219ENST00000606715 CCT4P50991 539 aaKnown RBP13.25□□□□□ -0.29
SHANK2-219ENST00000606715 TTC39AQ5SRH9 613 aa13.25□□□□□ -0.29
SHANK2-219ENST00000606715 FBXO31Q5XUX0 539 aaPredicted RBP13.25□□□□□ -0.29
SHANK2-219ENST00000606715 WASLO00401 505 aaPredicted RBP13.24□□□□□ -0.29
SHANK2-219ENST00000606715 RRP12Q5JTH9 1297 aaKnown RBP13.24□□□□□ -0.29
SHANK2-219ENST00000606715 DNAJC2Q99543 621 aaKnown RBP13.24□□□□□ -0.29
SHANK2-219ENST00000606715 MPHOSPH8Q99549 860 aa13.24□□□□□ -0.29
SHANK2-219ENST00000606715 NUP153P49790 1475 aaKnown RBP13.24□□□□□ -0.29
SHANK2-219ENST00000606715 IBSPP21815 317 aaPredicted RBP13.24□□□□□ -0.29
SHANK2-219ENST00000606715 PDE3AQ14432 1141 aa13.24□□□□□ -0.29
SHANK2-219ENST00000606715 KDM4AO75164 1064 aa13.24□□□□□ -0.29
SHANK2-219ENST00000606715 KRT18P05783 430 aaKnown RBP13.24□□□□□ -0.29
SHANK2-219ENST00000606715 CCDC158Q5M9N0 1113 aa13.24□□□□□ -0.29
SHANK2-219ENST00000606715 FSD1Q9BTV5 496 aa13.24□□□□□ -0.29
SHANK2-219ENST00000606715 TTLL12Q14166 644 aaPredicted RBP13.24□□□□□ -0.29
SHANK2-219ENST00000606715 AMOTQ4VCS5 1084 aa13.24□□□□□ -0.29
SHANK2-219ENST00000606715 IPO9Q96P70 1041 aaKnown RBP13.23□□□□□ -0.29
SHANK2-219ENST00000606715 NSD3Q9BZ95 1437 aa13.23□□□□□ -0.29
SHANK2-219ENST00000606715 HIP1O00291 1037 aa13.23□□□□□ -0.29
SHANK2-219ENST00000606715 C14orf93Q9H972 538 aaKnown RBP13.23□□□□□ -0.29
SHANK2-219ENST00000606715 NSD2O96028 1365 aa13.23□□□□□ -0.29
SHANK2-219ENST00000606715 RDXP35241 583 aaKnown RBP13.23□□□□□ -0.29
SHANK2-219ENST00000606715 VPS37CA5D8V6 355 aaPredicted RBP13.22□□□□□ -0.29
SHANK2-219ENST00000606715 HSP90AB2PQ58FF8 381 aa13.22□□□□□ -0.29
SHANK2-219ENST00000606715 EXOSC9Q06265 439 aaKnown RBP13.22□□□□□ -0.29
SHANK2-219ENST00000606715 SCAF11Q99590 1463 aaKnown RBP13.21□□□□□ -0.29
SHANK2-219ENST00000606715 GNAI2P04899 355 aa13.21□□□□□ -0.29
SHANK2-219ENST00000606715 SMC3Q9UQE7 1217 aa13.21□□□□□ -0.29
SHANK2-219ENST00000606715 NGLY1Q96IV0 654 aa13.21□□□□□ -0.29
SHANK2-219ENST00000606715 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.21□□□□□ -0.29
SHANK2-219ENST00000606715 ADAMTS2O95450 1211 aa13.21□□□□□ -0.3
SHANK2-219ENST00000606715 DDX11L8A8MPP1 907 aa13.2□□□□□ -0.3
SHANK2-219ENST00000606715 CNTROBQ8N137 903 aa13.2□□□□□ -0.3
SHANK2-219ENST00000606715 NFE2L2Q16236 605 aa13.2□□□□□ -0.3
SHANK2-219ENST00000606715 WAPLQ7Z5K2 1190 aa13.2□□□□□ -0.3
SHANK2-219ENST00000606715 GCC1Q96CN9 775 aa13.2□□□□□ -0.3
SHANK2-219ENST00000606715 UBAP1LF5GYI3 381 aa13.2□□□□□ -0.3
SHANK2-219ENST00000606715 PDE4AP27815 886 aa13.2□□□□□ -0.3
SHANK2-219ENST00000606715 SRCIN1Q9C0H9 1055 aa13.2□□□□□ -0.3
SHANK2-219ENST00000606715 GNAT3A8MTJ3 354 aa13.19□□□□□ -0.3
SHANK2-219ENST00000606715 STARD3NLO95772 234 aa13.19□□□□□ -0.3
SHANK2-219ENST00000606715 CCDC73Q6ZRK6 1079 aa13.19□□□□□ -0.3
SHANK2-219ENST00000606715 TMEM87AQ8NBN3 555 aa13.19□□□□□ -0.3
SHANK2-219ENST00000606715 SYCP2Q9BX26 1530 aa13.19□□□□□ -0.3
SHANK2-219ENST00000606715 ZPR1O75312 459 aa13.19□□□□□ -0.3
SHANK2-219ENST00000606715 XPCQ01831 940 aaPredicted RBP13.19□□□□□ -0.3
SHANK2-219ENST00000606715 NACAP1Q9BZK3 213 aa13.19□□□□□ -0.3
SHANK2-219ENST00000606715 DDX49Q9Y6V7 483 aaKnown RBP13.19□□□□□ -0.3
SHANK2-219ENST00000606715 SETQ01105 290 aaPredicted RBP13.19□□□□□ -0.3
SHANK2-219ENST00000606715 SYCP1Q15431 976 aa13.19□□□□□ -0.3
SHANK2-219ENST00000606715 ABCC11Q96J66 1382 aa13.19□□□□□ -0.3
SHANK2-219ENST00000606715 NOS1P29475 1434 aa13.19□□□□□ -0.3
SHANK2-219ENST00000606715 PATL2C9JE40 543 aaKnown RBP13.18□□□□□ -0.3
SHANK2-219ENST00000606715 SURF6O75683 361 aaKnown RBP13.18□□□□□ -0.3
SHANK2-219ENST00000606715 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
SHANK2-219ENST00000606715 ADGRF5Q8IZF2 1346 aa13.18□□□□□ -0.3
SHANK2-219ENST00000606715 CEP170Q5SW79 1584 aa13.18□□□□□ -0.3
SHANK2-219ENST00000606715 SPDYE4A6NLX3 237 aa13.18□□□□□ -0.3
SHANK2-219ENST00000606715 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-219ENST00000606715 ZC3H6P61129 1189 aaKnown RBP13.18□□□□□ -0.3
SHANK2-219ENST00000606715 RPRD2Q5VT52 1461 aaKnown RBP13.18□□□□□ -0.3
SHANK2-219ENST00000606715 BTBD11A6QL63 1104 aa13.18□□□□□ -0.3
SHANK2-219ENST00000606715 PSMA5P28066 241 aa13.18□□□□□ -0.3
SHANK2-219ENST00000606715 UHRF1BP1Q6BDS2 1440 aa13.18□□□□□ -0.3
SHANK2-219ENST00000606715 ATP2B1P20020 1258 aa13.18□□□□□ -0.3
SHANK2-219ENST00000606715 TTC21BQ7Z4L5 1316 aa13.18□□□□□ -0.3
SHANK2-219ENST00000606715 CDC45O75419 566 aa13.17□□□□□ -0.3
SHANK2-219ENST00000606715 TXLNAP40222 546 aa13.17□□□□□ -0.3
SHANK2-219ENST00000606715 RRS1Q15050 365 aaKnown RBP13.17□□□□□ -0.3
SHANK2-219ENST00000606715 SKOR2Q2VWA4 1001 aaPredicted RBP13.17□□□□□ -0.3
SHANK2-219ENST00000606715 CFAP74Q9C0B2 1584 aa13.17□□□□□ -0.3
SHANK2-219ENST00000606715 GPS2Q13227 327 aa13.17□□□□□ -0.3
SHANK2-219ENST00000606715 CCDC57Q2TAC2 916 aa13.17□□□□□ -0.3
SHANK2-219ENST00000606715 KRT28Q7Z3Y7 464 aa13.17□□□□□ -0.3
SHANK2-219ENST00000606715 CCDC173Q0VFZ6 552 aa13.17□□□□□ -0.3
SHANK2-219ENST00000606715 SOGA3Q5TF21 947 aa13.17□□□□□ -0.3
SHANK2-219ENST00000606715 PDCL3Q9H2J4 239 aa13.17□□□□□ -0.3
SHANK2-219ENST00000606715 ATP10AO60312 1499 aa13.17□□□□□ -0.3
SHANK2-219ENST00000606715 CHMP4BP1P59074 171 aa13.16□□□□□ -0.3
SHANK2-219ENST00000606715 STK11IPQ8N1F8 1099 aa13.16□□□□□ -0.3
SHANK2-219ENST00000606715 MYL6BP14649 208 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms