RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 STRN4Q9NRL3 753 aa16.08■□□□□ 0.16
CHMP2A-207ENST00000600804 ACEP12821 1306 aa16.08■□□□□ 0.16
CHMP2A-207ENST00000600804 TERF2IPQ9NYB0 399 aa16.07■□□□□ 0.16
CHMP2A-207ENST00000600804 PIK3C2AO00443 1686 aa16.07■□□□□ 0.16
CHMP2A-207ENST00000600804 CASZ1Q86V15 1759 aa16.07■□□□□ 0.16
CHMP2A-207ENST00000600804 MON2Q7Z3U7 1717 aa16.06■□□□□ 0.16
CHMP2A-207ENST00000600804 UTRNP46939 3433 aa16.06■□□□□ 0.16
CHMP2A-207ENST00000600804 COL5A2P05997 1499 aaPredicted RBP16.05■□□□□ 0.16
CHMP2A-207ENST00000600804 USP19O94966 1318 aa16.05■□□□□ 0.16
CHMP2A-207ENST00000600804 LARP1Q6PKG0 1096 aaKnown RBP16.05■□□□□ 0.16
CHMP2A-207ENST00000600804 FAM196AQ6ZSG2 479 aa16.05■□□□□ 0.16
CHMP2A-207ENST00000600804 TMC1Q8TDI8 760 aa16.05■□□□□ 0.16
CHMP2A-207ENST00000600804 USP35Q9P2H5 1018 aa16.05■□□□□ 0.16
CHMP2A-207ENST00000600804 A0A1W2PP64 1363 aa16.04■□□□□ 0.16
CHMP2A-207ENST00000600804 CPDO75976 1380 aa16.04■□□□□ 0.16
CHMP2A-207ENST00000600804 BARGINQ6ZT62 677 aa16.04■□□□□ 0.16
CHMP2A-207ENST00000600804 HDGFL2Q7Z4V5 671 aaPredicted RBP16.04■□□□□ 0.16
CHMP2A-207ENST00000600804 SLIT3O75094 1523 aa16.04■□□□□ 0.16
CHMP2A-207ENST00000600804 USP6P35125 1406 aa16.03■□□□□ 0.16
CHMP2A-207ENST00000600804 PARD3Q8TEW0 1356 aa16.03■□□□□ 0.16
CHMP2A-207ENST00000600804 APBA3O96018 575 aa16.03■□□□□ 0.16
CHMP2A-207ENST00000600804 POLR3GLQ9BT43 218 aa16.03■□□□□ 0.16
CHMP2A-207ENST00000600804 EDC4Q6P2E9 1401 aaKnown RBP16.02■□□□□ 0.15
CHMP2A-207ENST00000600804 PANK3Q9H999 370 aa16.01■□□□□ 0.15
CHMP2A-207ENST00000600804 KTN1Q86UP2 1357 aaKnown RBP16■□□□□ 0.15
CHMP2A-207ENST00000600804 PER1O15534 1290 aaPredicted RBP16■□□□□ 0.15
CHMP2A-207ENST00000600804 ABTB2Q8N961 1025 aa15.99■□□□□ 0.15
CHMP2A-207ENST00000600804 CARD14Q9BXL6 1004 aa15.99■□□□□ 0.15
CHMP2A-207ENST00000600804 NPC1L1Q9UHC9 1359 aa15.99■□□□□ 0.15
CHMP2A-207ENST00000600804 TTC21AQ8NDW8 1320 aa15.98■□□□□ 0.15
CHMP2A-207ENST00000600804 TCP11L2Q8N4U5 519 aa15.98■□□□□ 0.15
CHMP2A-207ENST00000600804 CRB1P82279 1406 aa15.97■□□□□ 0.15
CHMP2A-207ENST00000600804 EVA1CP58658 441 aa15.97■□□□□ 0.15
CHMP2A-207ENST00000600804 DDX10Q13206 875 aaKnown RBP15.97■□□□□ 0.15
CHMP2A-207ENST00000600804 PDE3BQ13370 1112 aa15.97■□□□□ 0.15
CHMP2A-207ENST00000600804 TTC21BQ7Z4L5 1316 aa15.96■□□□□ 0.15
CHMP2A-207ENST00000600804 USP54Q70EL1 1684 aa15.96■□□□□ 0.15
CHMP2A-207ENST00000600804 NSD3Q9BZ95 1437 aa15.96■□□□□ 0.15
CHMP2A-207ENST00000600804 GCP02774 474 aa15.96■□□□□ 0.15
CHMP2A-207ENST00000600804 PTF1AQ7RTS3 328 aa15.96■□□□□ 0.15
CHMP2A-207ENST00000600804 NSD2O96028 1365 aa15.96■□□□□ 0.15
CHMP2A-207ENST00000600804 KNSTRNQ9Y448 316 aa15.95■□□□□ 0.14
CHMP2A-207ENST00000600804 CGNL1Q0VF96 1302 aa15.94■□□□□ 0.14
CHMP2A-207ENST00000600804 OVOS2A0A0G2JMS6 1433 aa15.94■□□□□ 0.14
CHMP2A-207ENST00000600804 OVOS2A0A0J9YW53 1432 aa15.94■□□□□ 0.14
CHMP2A-207ENST00000600804 OVOS2Q6IE36 1432 aa15.94■□□□□ 0.14
CHMP2A-207ENST00000600804 AMER1Q5JTC6 1135 aaPredicted RBP15.94■□□□□ 0.14
CHMP2A-207ENST00000600804 THRAP3Q9Y2W1 955 aaKnown RBP15.94■□□□□ 0.14
CHMP2A-207ENST00000600804 USP31Q70CQ4 1352 aa15.94■□□□□ 0.14
CHMP2A-207ENST00000600804 KIF20BQ96Q89 1820 aa15.94■□□□□ 0.14
CHMP2A-207ENST00000600804 LTN1O94822 1766 aa15.93■□□□□ 0.14
CHMP2A-207ENST00000600804 ANO8Q9HCE9 1232 aaPredicted RBP15.93■□□□□ 0.14
CHMP2A-207ENST00000600804 AATKQ6ZMQ8 1374 aa15.92■□□□□ 0.14
CHMP2A-207ENST00000600804 ANKRD26Q9UPS8 1709 aa15.92■□□□□ 0.14
CHMP2A-207ENST00000600804 NLRP13Q86W25 1043 aa15.92■□□□□ 0.14
CHMP2A-207ENST00000600804 NHSQ6T4R5 1651 aa15.92■□□□□ 0.14
CHMP2A-207ENST00000600804 NFAT5O94916 1531 aa15.91■□□□□ 0.14
CHMP2A-207ENST00000600804 FYB1O15117 783 aa15.91■□□□□ 0.14
CHMP2A-207ENST00000600804 PDGFDQ9GZP0 370 aaPredicted RBP15.91■□□□□ 0.14
CHMP2A-207ENST00000600804 AXIN2Q9Y2T1 843 aa15.91■□□□□ 0.14
CHMP2A-207ENST00000600804 CHD4Q14839 1912 aa15.9■□□□□ 0.14
CHMP2A-207ENST00000600804 ZBTB7CA1YPR0 619 aa15.89■□□□□ 0.13
CHMP2A-207ENST00000600804 KCNQ2O43526 872 aa15.89■□□□□ 0.13
CHMP2A-207ENST00000600804 NBPF14Q5TI25 921 aa15.89■□□□□ 0.13
CHMP2A-207ENST00000600804 PROM2Q8N271 834 aa15.89■□□□□ 0.13
CHMP2A-207ENST00000600804 PAPPAQ13219 1627 aa15.89■□□□□ 0.13
CHMP2A-207ENST00000600804 BTAF1O14981 1849 aa15.89■□□□□ 0.13
CHMP2A-207ENST00000600804 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.88■□□□□ 0.13
CHMP2A-207ENST00000600804 KAT6BQ8WYB5 2073 aa15.87■□□□□ 0.13
CHMP2A-207ENST00000600804 YY1P25490 414 aa15.87■□□□□ 0.13
CHMP2A-207ENST00000600804 NLRP6P59044 892 aa15.87■□□□□ 0.13
CHMP2A-207ENST00000600804 NME9Q86XW9 330 aa15.87■□□□□ 0.13
CHMP2A-207ENST00000600804 MARCH10Q8NA82 808 aaPredicted RBP15.87■□□□□ 0.13
CHMP2A-207ENST00000600804 SPON1Q9HCB6 807 aa15.87■□□□□ 0.13
CHMP2A-207ENST00000600804 TUBGCP6Q96RT7 1819 aa15.87■□□□□ 0.13
CHMP2A-207ENST00000600804 BCL9O00512 1426 aa15.86■□□□□ 0.13
CHMP2A-207ENST00000600804 PLSCR1O15162 318 aa15.86■□□□□ 0.13
CHMP2A-207ENST00000600804 DDB1Q16531 1140 aa15.86■□□□□ 0.13
CHMP2A-207ENST00000600804 WDR17Q8IZU2 1322 aa15.86■□□□□ 0.13
CHMP2A-207ENST00000600804 COG3Q96JB2 828 aa15.85■□□□□ 0.13
CHMP2A-207ENST00000600804 GOLGB1Q14789 3259 aaKnown RBP15.85■□□□□ 0.13
CHMP2A-207ENST00000600804 TOM1L2Q6ZVM7 507 aa15.84■□□□□ 0.13
CHMP2A-207ENST00000600804 COL24A1Q17RW2 1714 aa15.83■□□□□ 0.13
CHMP2A-207ENST00000600804 RALBP1Q15311 655 aa15.83■□□□□ 0.12
CHMP2A-207ENST00000600804 ARHGEF25Q86VW2 580 aa15.83■□□□□ 0.12
CHMP2A-207ENST00000600804 BCL11BQ9C0K0 894 aaPredicted RBP15.83■□□□□ 0.12
CHMP2A-207ENST00000600804 GGNBP2Q9H3C7 697 aa15.83■□□□□ 0.12
CHMP2A-207ENST00000600804 ABCC6O95255 1503 aa15.83■□□□□ 0.12
CHMP2A-207ENST00000600804 QSER1Q2KHR3 1735 aa15.82■□□□□ 0.12
CHMP2A-207ENST00000600804 PTGER2P43116 358 aa15.82■□□□□ 0.12
CHMP2A-207ENST00000600804 KCNH5Q8NCM2 988 aa15.82■□□□□ 0.12
CHMP2A-207ENST00000600804 PPP1R1BQ9UD71 204 aaPredicted RBP15.82■□□□□ 0.12
CHMP2A-207ENST00000600804 RGPD2P0DJD1 1756 aa15.82■□□□□ 0.12
CHMP2A-207ENST00000600804 TNS2Q63HR2 1409 aa15.81■□□□□ 0.12
CHMP2A-207ENST00000600804 SHANK3Q9BYB0 1731 aa15.81■□□□□ 0.12
CHMP2A-207ENST00000600804 ZBTB7AO95365 584 aa15.8■□□□□ 0.12
CHMP2A-207ENST00000600804 CC2D1BQ5T0F9 858 aaKnown RBP15.8■□□□□ 0.12
CHMP2A-207ENST00000600804 MORC1Q86VD1 984 aa15.8■□□□□ 0.12
CHMP2A-207ENST00000600804 PRKRIP1Q9H875 184 aaPredicted RBP15.8■□□□□ 0.12
CHMP2A-207ENST00000600804 KIF24Q5T7B8 1368 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms