RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 LRRC7Q96NW7 1537 aa23.1■■□□□ 1.29
ARHGEF1-221ENST00000600387 CLTCQ00610 1675 aaKnown RBP23.1■■□□□ 1.29
ARHGEF1-221ENST00000600387 ZNF445P59923 1031 aa23.09■■□□□ 1.29
ARHGEF1-221ENST00000600387 SRPK2P78362 688 aaKnown RBP23.09■■□□□ 1.29
ARHGEF1-221ENST00000600387 RABEP1Q15276 862 aa23.09■■□□□ 1.29
ARHGEF1-221ENST00000600387 MRPL50Q8N5N7 158 aaKnown RBP23.09■■□□□ 1.29
ARHGEF1-221ENST00000600387 NUCB2P80303 420 aa23.08■■□□□ 1.29
ARHGEF1-221ENST00000600387 MSNP26038 577 aaKnown RBP23.08■■□□□ 1.29
ARHGEF1-221ENST00000600387 KIAA1211Q6ZU35 1233 aa23.08■■□□□ 1.29
ARHGEF1-221ENST00000600387 OFD1O75665 1012 aa23.07■■□□□ 1.28
ARHGEF1-221ENST00000600387 CALD1Q05682 793 aaKnown RBP23.07■■□□□ 1.28
ARHGEF1-221ENST00000600387 PDCL3Q9H2J4 239 aa23.07■■□□□ 1.28
ARHGEF1-221ENST00000600387 ABCC3O15438 1527 aa23.07■■□□□ 1.28
ARHGEF1-221ENST00000600387 FAM135BQ49AJ0 1406 aa23.07■■□□□ 1.28
ARHGEF1-221ENST00000600387 VAMP4O75379 141 aa23.07■■□□□ 1.28
ARHGEF1-221ENST00000600387 TERF1P54274 439 aa23.07■■□□□ 1.28
ARHGEF1-221ENST00000600387 HS1BP3Q53T59 392 aa23.07■■□□□ 1.28
ARHGEF1-221ENST00000600387 ZMYND15Q9H091 742 aa23.07■■□□□ 1.28
ARHGEF1-221ENST00000600387 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.06■■□□□ 1.28
ARHGEF1-221ENST00000600387 ABCC4O15439 1325 aa23.06■■□□□ 1.28
ARHGEF1-221ENST00000600387 FRMPD1Q5SYB0 1578 aa23.06■■□□□ 1.28
ARHGEF1-221ENST00000600387 SIGLEC1Q9BZZ2 1709 aa23.06■■□□□ 1.28
ARHGEF1-221ENST00000600387 C1orf115Q9H7X2 142 aa23.06■■□□□ 1.28
ARHGEF1-221ENST00000600387 CD163L1Q9NR16 1453 aa23.05■■□□□ 1.28
ARHGEF1-221ENST00000600387 SIRT2Q8IXJ6 389 aa23.05■■□□□ 1.28
ARHGEF1-221ENST00000600387 SAFB2Q14151 953 aaKnown RBP eCLIP23.04■■□□□ 1.28
ARHGEF1-221ENST00000600387 GGT6Q6P531 493 aa23.03■■□□□ 1.28
ARHGEF1-221ENST00000600387 CYP2E1P05181 493 aaPredicted RBP23.02■■□□□ 1.28
ARHGEF1-221ENST00000600387 PRKAR2BP31323 418 aa23.02■■□□□ 1.28
ARHGEF1-221ENST00000600387 CWC22Q9HCG8 908 aaKnown RBP23.02■■□□□ 1.28
ARHGEF1-221ENST00000600387 GNAI1P63096 354 aa23.01■■□□□ 1.27
ARHGEF1-221ENST00000600387 NUTM2DQ5VT03 806 aaPredicted RBP23.01■■□□□ 1.27
ARHGEF1-221ENST00000600387 MCTP1Q6DN14 999 aa23.01■■□□□ 1.27
ARHGEF1-221ENST00000600387 HDGFL2Q7Z4V5 671 aaPredicted RBP23.01■■□□□ 1.27
ARHGEF1-221ENST00000600387 KIF24Q5T7B8 1368 aa23.01■■□□□ 1.27
ARHGEF1-221ENST00000600387 MLH3Q9UHC1 1453 aa23.01■■□□□ 1.27
ARHGEF1-221ENST00000600387 GSPT1P15170 499 aaKnown RBP23.01■■□□□ 1.27
ARHGEF1-221ENST00000600387 NFE2L2Q16236 605 aa23.01■■□□□ 1.27
ARHGEF1-221ENST00000600387 IFT57Q9NWB7 429 aa23.01■■□□□ 1.27
ARHGEF1-221ENST00000600387 PTPRMP28827 1452 aa23■■□□□ 1.27
ARHGEF1-221ENST00000600387 ZSCAN23Q3MJ62 389 aa23■■□□□ 1.27
ARHGEF1-221ENST00000600387 PLEKHM2Q8IWE5 1019 aa23■■□□□ 1.27
ARHGEF1-221ENST00000600387 API5Q9BZZ5 524 aaKnown RBP22.99■■□□□ 1.27
ARHGEF1-221ENST00000600387 LMBRD1Q9NUN5 540 aa22.99■■□□□ 1.27
ARHGEF1-221ENST00000600387 CAVIN1Q6NZI2 390 aaKnown RBP22.98■■□□□ 1.27
ARHGEF1-221ENST00000600387 TTC22Q5TAA0 569 aa22.98■■□□□ 1.27
ARHGEF1-221ENST00000600387 USP26Q9BXU7 913 aa22.98■■□□□ 1.27
ARHGEF1-221ENST00000600387 MAP2P11137 1827 aaKnown RBP22.98■■□□□ 1.27
ARHGEF1-221ENST00000600387 KNDC1Q76NI1 1749 aa22.97■■□□□ 1.27
ARHGEF1-221ENST00000600387 INTS3Q68E01 1043 aaKnown RBP22.97■■□□□ 1.27
ARHGEF1-221ENST00000600387 TSPYL6Q8N831 410 aa22.97■■□□□ 1.27
ARHGEF1-221ENST00000600387 PDLIM2Q96JY6 352 aa22.97■■□□□ 1.27
ARHGEF1-221ENST00000600387 DCTPP1Q9H773 170 aa22.97■■□□□ 1.27
ARHGEF1-221ENST00000600387 NOL7Q9UMY1 257 aaKnown RBP22.97■■□□□ 1.27
ARHGEF1-221ENST00000600387 ASXL2Q76L83 1435 aa22.97■■□□□ 1.27
ARHGEF1-221ENST00000600387 POGZQ7Z3K3 1410 aa22.97■■□□□ 1.27
ARHGEF1-221ENST00000600387 ZNF853P0CG23 659 aa22.96■■□□□ 1.27
ARHGEF1-221ENST00000600387 NCLP19338 710 aaKnown RBP22.96■■□□□ 1.27
ARHGEF1-221ENST00000600387 STK26Q9P289 416 aa22.96■■□□□ 1.27
ARHGEF1-221ENST00000600387 YEATS2Q9ULM3 1422 aa22.96■■□□□ 1.27
ARHGEF1-221ENST00000600387 ZNF500O60304 480 aaPredicted RBP22.95■■□□□ 1.26
ARHGEF1-221ENST00000600387 TWISTNBQ3B726 338 aaPredicted RBP22.94■■□□□ 1.26
ARHGEF1-221ENST00000600387 DLG5Q8TDM6 1919 aa22.94■■□□□ 1.26
ARHGEF1-221ENST00000600387 MINK1Q8N4C8 1332 aaPredicted RBP22.94■■□□□ 1.26
ARHGEF1-221ENST00000600387 ST18O60284 1047 aa22.94■■□□□ 1.26
ARHGEF1-221ENST00000600387 MBIPQ9NS73 344 aa22.94■■□□□ 1.26
ARHGEF1-221ENST00000600387 CASC1Q6TDU7 716 aa22.93■■□□□ 1.26
ARHGEF1-221ENST00000600387 MYO5BQ9ULV0 1848 aa22.93■■□□□ 1.26
ARHGEF1-221ENST00000600387 RBSNQ9H1K0 784 aa22.93■■□□□ 1.26
ARHGEF1-221ENST00000600387 PHACTR3Q96KR7 559 aa22.92■■□□□ 1.26
ARHGEF1-221ENST00000600387 MAP7D2Q96T17 732 aa22.92■■□□□ 1.26
ARHGEF1-221ENST00000600387 POLKQ9UBT6 870 aa22.92■■□□□ 1.26
ARHGEF1-221ENST00000600387 YTHDC2Q9H6S0 1430 aaKnown RBP22.91■■□□□ 1.26
ARHGEF1-221ENST00000600387 LMOD3Q0VAK6 560 aa22.91■■□□□ 1.26
ARHGEF1-221ENST00000600387 PRAM1Q96QH2 718 aa22.91■■□□□ 1.26
ARHGEF1-221ENST00000600387 THUMPD2Q9BTF0 503 aaKnown RBP22.91■■□□□ 1.26
ARHGEF1-221ENST00000600387 MCM5P33992 734 aa22.91■■□□□ 1.26
ARHGEF1-221ENST00000600387 ELL2O00472 640 aaPredicted RBP22.89■■□□□ 1.26
ARHGEF1-221ENST00000600387 PRIM1P49642 420 aaKnown RBP22.89■■□□□ 1.26
ARHGEF1-221ENST00000600387 PRPF40AO75400 957 aaKnown RBP22.88■■□□□ 1.25
ARHGEF1-221ENST00000600387 HMOX1P09601 288 aa22.88■■□□□ 1.25
ARHGEF1-221ENST00000600387 PKP1Q13835 747 aa22.88■■□□□ 1.25
ARHGEF1-221ENST00000600387 ARHGEF40Q8TER5 1519 aa22.88■■□□□ 1.25
ARHGEF1-221ENST00000600387 CSPP1Q1MSJ5 1256 aa22.88■■□□□ 1.25
ARHGEF1-221ENST00000600387 ANKRD44Q8N8A2 993 aa22.88■■□□□ 1.25
ARHGEF1-221ENST00000600387 REC8O95072 547 aa22.87■■□□□ 1.25
ARHGEF1-221ENST00000600387 LRSAM1Q6UWE0 723 aa22.87■■□□□ 1.25
ARHGEF1-221ENST00000600387 RPAP2Q8IXW5 612 aaPredicted RBP22.87■■□□□ 1.25
ARHGEF1-221ENST00000600387 GPT2Q8TD30 523 aa22.87■■□□□ 1.25
ARHGEF1-221ENST00000600387 CDK19Q9BWU1 502 aa22.87■■□□□ 1.25
ARHGEF1-221ENST00000600387 SLC52A1Q9NWF4 448 aa22.87■■□□□ 1.25
ARHGEF1-221ENST00000600387 CABP1Q9NZU7 370 aa22.87■■□□□ 1.25
ARHGEF1-221ENST00000600387 ZKSCAN5Q9Y2L8 839 aa22.87■■□□□ 1.25
ARHGEF1-221ENST00000600387 IDI1Q13907 227 aa22.87■■□□□ 1.25
ARHGEF1-221ENST00000600387 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.87■■□□□ 1.25
ARHGEF1-221ENST00000600387 R3HCC1Q9Y3T6 440 aaKnown RBP22.87■■□□□ 1.25
ARHGEF1-221ENST00000600387 C8orf58Q8NAV2 365 aa22.86■■□□□ 1.25
ARHGEF1-221ENST00000600387 ATP7BP35670 1465 aa22.86■■□□□ 1.25
ARHGEF1-221ENST00000600387 SDSP20132 328 aa22.85■■□□□ 1.25
ARHGEF1-221ENST00000600387 ATP10DQ9P241 1426 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms