RNA–Protein interactions for RNA: ENST00000598059.5

SYMPK-208, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-208ENST00000598059 CD163L1Q9NR16 1453 aa30.23■■■□□ 2.43
SYMPK-208ENST00000598059 WDR17Q8IZU2 1322 aa30.22■■■□□ 2.43
SYMPK-208ENST00000598059 NFAT5O94916 1531 aa30.22■■■□□ 2.43
SYMPK-208ENST00000598059 CCER1Q8TC90 406 aaPredicted RBP30.22■■■□□ 2.43
SYMPK-208ENST00000598059 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.2■■■□□ 2.43
SYMPK-208ENST00000598059 TMC1Q8TDI8 760 aa30.2■■■□□ 2.43
SYMPK-208ENST00000598059 LRP5O75197 1615 aa30.2■■■□□ 2.43
SYMPK-208ENST00000598059 PARD3Q8TEW0 1356 aa30.19■■■□□ 2.42
SYMPK-208ENST00000598059 CLSPNQ9HAW4 1339 aa30.19■■■□□ 2.42
SYMPK-208ENST00000598059 LRRC37A3O60309 1634 aa30.18■■■□□ 2.42
SYMPK-208ENST00000598059 USP31Q70CQ4 1352 aa30.18■■■□□ 2.42
SYMPK-208ENST00000598059 SLC12A5Q9H2X9 1139 aa30.18■■■□□ 2.42
SYMPK-208ENST00000598059 C11orf95C9JLR9 678 aaPredicted RBP30.17■■■□□ 2.42
SYMPK-208ENST00000598059 R3HDM1Q15032 1099 aaKnown RBP30.17■■■□□ 2.42
SYMPK-208ENST00000598059 WNK3Q9BYP7 1800 aa30.17■■■□□ 2.42
SYMPK-208ENST00000598059 USP54Q70EL1 1684 aa30.17■■■□□ 2.42
SYMPK-208ENST00000598059 PEAK1Q9H792 1746 aa30.16■■■□□ 2.42
SYMPK-208ENST00000598059 DDB1Q16531 1140 aa30.16■■■□□ 2.42
SYMPK-208ENST00000598059 PUS7Q96PZ0 661 aaKnown RBP30.16■■■□□ 2.42
SYMPK-208ENST00000598059 OVOS2A0A0G2JMS6 1433 aa30.15■■■□□ 2.42
SYMPK-208ENST00000598059 OVOS2A0A0J9YW53 1432 aa30.15■■■□□ 2.42
SYMPK-208ENST00000598059 OVOS2Q6IE36 1432 aa30.15■■■□□ 2.42
SYMPK-208ENST00000598059 HDGFL2Q7Z4V5 671 aaPredicted RBP30.15■■■□□ 2.42
SYMPK-208ENST00000598059 ABCC6O95255 1503 aa30.14■■■□□ 2.42
SYMPK-208ENST00000598059 NME9Q86XW9 330 aa30.14■■■□□ 2.42
SYMPK-208ENST00000598059 CARD10Q9BWT7 1032 aa30.14■■■□□ 2.42
SYMPK-208ENST00000598059 RREB1Q92766 1687 aa30.14■■■□□ 2.41
SYMPK-208ENST00000598059 CSB-PGBD3P0DP91 1061 aa30.13■■■□□ 2.41
SYMPK-208ENST00000598059 TESK2Q96S53 571 aa30.12■■■□□ 2.41
SYMPK-208ENST00000598059 CDCA7Q9BWT1 371 aaPredicted RBP30.12■■■□□ 2.41
SYMPK-208ENST00000598059 TERF2IPQ9NYB0 399 aa30.12■■■□□ 2.41
SYMPK-208ENST00000598059 SBF2Q86WG5 1849 aa30.12■■■□□ 2.41
SYMPK-208ENST00000598059 EDC4Q6P2E9 1401 aaKnown RBP30.12■■■□□ 2.41
SYMPK-208ENST00000598059 ST20-MTHFSA0A0A6YYL1 179 aa30.11■■■□□ 2.41
SYMPK-208ENST00000598059 A0A1W2PP64 1363 aa30.11■■■□□ 2.41
SYMPK-208ENST00000598059 NUP188Q5SRE5 1749 aa30.09■■■□□ 2.41
SYMPK-208ENST00000598059 LTN1O94822 1766 aa30.08■■■□□ 2.41
SYMPK-208ENST00000598059 MARCH10Q8NA82 808 aaPredicted RBP30.06■■■□□ 2.4
SYMPK-208ENST00000598059 CCDC7Q96M83 1385 aa30.05■■■□□ 2.4
SYMPK-208ENST00000598059 NINLQ9Y2I6 1382 aa30.04■■■□□ 2.4
SYMPK-208ENST00000598059 SLC24A1O60721 1099 aa30.04■■■□□ 2.4
SYMPK-208ENST00000598059 ERBB3P21860 1342 aa30.03■■■□□ 2.4
SYMPK-208ENST00000598059 BCL9O00512 1426 aa30.03■■■□□ 2.4
SYMPK-208ENST00000598059 RGPD3A6NKT7 1758 aaPredicted RBP30.02■■■□□ 2.4
SYMPK-208ENST00000598059 RGPD4Q7Z3J3 1758 aa30.02■■■□□ 2.4
SYMPK-208ENST00000598059 EXOC5O00471 708 aa30.01■■■□□ 2.39
SYMPK-208ENST00000598059 NBPF14Q5TI25 921 aa30.01■■■□□ 2.39
SYMPK-208ENST00000598059 BCL11BQ9C0K0 894 aaPredicted RBP30.01■■■□□ 2.39
SYMPK-208ENST00000598059 PLSCR1O15162 318 aa30■■■□□ 2.39
SYMPK-208ENST00000598059 PTF1AQ7RTS3 328 aa30■■■□□ 2.39
SYMPK-208ENST00000598059 NLRP2Q9NX02 1062 aa29.97■■■□□ 2.39
SYMPK-208ENST00000598059 TNS2Q63HR2 1409 aa29.96■■■□□ 2.39
SYMPK-208ENST00000598059 ANKRD24Q8TF21 1146 aa29.96■■■□□ 2.39
SYMPK-208ENST00000598059 USP47Q96K76 1375 aa29.95■■■□□ 2.39
SYMPK-208ENST00000598059 ANKRD36BQ8N2N9 1353 aa29.92■■■□□ 2.38
SYMPK-208ENST00000598059 IL2RBP14784 551 aa29.91■■■□□ 2.38
SYMPK-208ENST00000598059 TMF1P82094 1093 aa29.91■■■□□ 2.38
SYMPK-208ENST00000598059 IP6K1Q92551 441 aa29.91■■■□□ 2.38
SYMPK-208ENST00000598059 COG3Q96JB2 828 aa29.91■■■□□ 2.38
SYMPK-208ENST00000598059 PROM2Q8N271 834 aa29.89■■■□□ 2.38
SYMPK-208ENST00000598059 KAT6BQ8WYB5 2073 aa29.86■■■□□ 2.37
SYMPK-208ENST00000598059 KCNQ2O43526 872 aa29.85■■■□□ 2.37
SYMPK-208ENST00000598059 ANO8Q9HCE9 1232 aaPredicted RBP29.85■■■□□ 2.37
SYMPK-208ENST00000598059 MAP3K19Q56UN5 1328 aa29.85■■■□□ 2.37
SYMPK-208ENST00000598059 FAM208AQ9UK61 1670 aaKnown RBP29.85■■■□□ 2.37
SYMPK-208ENST00000598059 FBLN1P23142 703 aa29.84■■■□□ 2.37
SYMPK-208ENST00000598059 NHSQ6T4R5 1651 aa29.84■■■□□ 2.37
SYMPK-208ENST00000598059 LTV1Q96GA3 475 aaPredicted RBP29.83■■■□□ 2.37
SYMPK-208ENST00000598059 TIMELESSQ9UNS1 1208 aa29.83■■■□□ 2.37
SYMPK-208ENST00000598059 HOXC9P31274 260 aa29.82■■■□□ 2.36
SYMPK-208ENST00000598059 FYB1O15117 783 aa29.81■■■□□ 2.36
SYMPK-208ENST00000598059 TXNRD1Q16881 649 aa29.81■■■□□ 2.36
SYMPK-208ENST00000598059 CDCA8Q53HL2 280 aa29.81■■■□□ 2.36
SYMPK-208ENST00000598059 ACSBG1Q96GR2 724 aa29.81■■■□□ 2.36
SYMPK-208ENST00000598059 AMPHP49418 695 aa29.8■■■□□ 2.36
SYMPK-208ENST00000598059 SPON1Q9HCB6 807 aa29.79■■■□□ 2.36
SYMPK-208ENST00000598059 GGNBP2Q9H3C7 697 aa29.78■■■□□ 2.36
SYMPK-208ENST00000598059 CASZ1Q86V15 1759 aa29.77■■■□□ 2.36
SYMPK-208ENST00000598059 RGPD2P0DJD1 1756 aa29.76■■■□□ 2.35
SYMPK-208ENST00000598059 BTAF1O14981 1849 aa29.75■■■□□ 2.35
SYMPK-208ENST00000598059 RTL1A6NKG5 1358 aa29.75■■■□□ 2.35
SYMPK-208ENST00000598059 RRS1Q15050 365 aaKnown RBP29.74■■■□□ 2.35
SYMPK-208ENST00000598059 PDGFDQ9GZP0 370 aaPredicted RBP29.73■■■□□ 2.35
SYMPK-208ENST00000598059 KIF20BQ96Q89 1820 aa29.73■■■□□ 2.35
SYMPK-208ENST00000598059 DDX54Q8TDD1 881 aaKnown RBP29.72■■■□□ 2.35
SYMPK-208ENST00000598059 MYOM1P52179 1685 aa29.72■■■□□ 2.35
SYMPK-208ENST00000598059 STK32BQ9NY57 414 aa29.71■■■□□ 2.35
SYMPK-208ENST00000598059 PPP1R1BQ9UD71 204 aaPredicted RBP29.71■■■□□ 2.35
SYMPK-208ENST00000598059 SLC15A2Q16348 729 aa29.7■■■□□ 2.35
SYMPK-208ENST00000598059 CARD14Q9BXL6 1004 aa29.69■■■□□ 2.34
SYMPK-208ENST00000598059 NBPF6Q5VWK0 638 aa29.66■■■□□ 2.34
SYMPK-208ENST00000598059 NBPF4Q96M43 638 aa29.66■■■□□ 2.34
SYMPK-208ENST00000598059 MEGF6O75095 1541 aa29.66■■■□□ 2.34
SYMPK-208ENST00000598059 SHANK3Q9BYB0 1731 aa29.65■■■□□ 2.34
SYMPK-208ENST00000598059 PAPPAQ13219 1627 aa29.64■■■□□ 2.34
SYMPK-208ENST00000598059 ZBTB7AO95365 584 aa29.64■■■□□ 2.34
SYMPK-208ENST00000598059 ZCRB1Q8TBF4 217 aaKnown RBP29.64■■■□□ 2.34
SYMPK-208ENST00000598059 SMG6Q86US8 1419 aaKnown RBP29.63■■■□□ 2.33
SYMPK-208ENST00000598059 NSD3Q9BZ95 1437 aa29.63■■■□□ 2.33
SYMPK-208ENST00000598059 HSP90AB2PQ58FF8 381 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms