RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 USP47Q96K76 1375 aa25.22■■□□□ 1.63
CHMP2A-203ENST00000597209 FAM182BQ5T319 152 aa25.22■■□□□ 1.63
CHMP2A-203ENST00000597209 FAM196AQ6ZSG2 479 aa25.22■■□□□ 1.63
CHMP2A-203ENST00000597209 PCGF6Q9BYE7 350 aa25.22■■□□□ 1.63
CHMP2A-203ENST00000597209 ABCC6O95255 1503 aa25.22■■□□□ 1.63
CHMP2A-203ENST00000597209 BAG6P46379 1132 aa25.21■■□□□ 1.63
CHMP2A-203ENST00000597209 WDR17Q8IZU2 1322 aa25.2■■□□□ 1.62
CHMP2A-203ENST00000597209 PDE3BQ13370 1112 aa25.2■■□□□ 1.62
CHMP2A-203ENST00000597209 NME9Q86XW9 330 aa25.2■■□□□ 1.62
CHMP2A-203ENST00000597209 PARP4Q9UKK3 1724 aaKnown RBP25.2■■□□□ 1.62
CHMP2A-203ENST00000597209 SOX12O15370 315 aa25.18■■□□□ 1.62
CHMP2A-203ENST00000597209 TMF1P82094 1093 aa25.18■■□□□ 1.62
CHMP2A-203ENST00000597209 TOM1L2Q6ZVM7 507 aa25.18■■□□□ 1.62
CHMP2A-203ENST00000597209 DISP2A7MBM2 1401 aa25.18■■□□□ 1.62
CHMP2A-203ENST00000597209 RGPD5Q99666 1765 aa25.16■■□□□ 1.62
CHMP2A-203ENST00000597209 C11orf95C9JLR9 678 aaPredicted RBP25.15■■□□□ 1.62
CHMP2A-203ENST00000597209 TNS1Q9HBL0 1735 aaKnown RBP25.15■■□□□ 1.62
CHMP2A-203ENST00000597209 OVOS2A0A0J9YW53 1432 aa25.14■■□□□ 1.62
CHMP2A-203ENST00000597209 OVOS2Q6IE36 1432 aa25.14■■□□□ 1.62
CHMP2A-203ENST00000597209 CARD10Q9BWT7 1032 aa25.14■■□□□ 1.62
CHMP2A-203ENST00000597209 CDCA7Q9BWT1 371 aaPredicted RBP25.13■■□□□ 1.61
CHMP2A-203ENST00000597209 ANKRD36BQ8N2N9 1353 aa25.13■■□□□ 1.61
CHMP2A-203ENST00000597209 CDCA8Q53HL2 280 aa25.12■■□□□ 1.61
CHMP2A-203ENST00000597209 TRIM37O94972 964 aa25.11■■□□□ 1.61
CHMP2A-203ENST00000597209 WNK3Q9BYP7 1800 aa25.11■■□□□ 1.61
CHMP2A-203ENST00000597209 CSB-PGBD3P0DP91 1061 aa25.1■■□□□ 1.61
CHMP2A-203ENST00000597209 EN1Q05925 392 aaPredicted RBP25.1■■□□□ 1.61
CHMP2A-203ENST00000597209 LRRC37A3O60309 1634 aa25.09■■□□□ 1.61
CHMP2A-203ENST00000597209 CCDC7Q96M83 1385 aa25.09■■□□□ 1.61
CHMP2A-203ENST00000597209 LTN1O94822 1766 aa25.09■■□□□ 1.61
CHMP2A-203ENST00000597209 DDB1Q16531 1140 aa25.09■■□□□ 1.61
CHMP2A-203ENST00000597209 ERBB3P21860 1342 aa25.07■■□□□ 1.6
CHMP2A-203ENST00000597209 PEAK1Q9H792 1746 aa25.06■■□□□ 1.6
CHMP2A-203ENST00000597209 OVOS2A0A0G2JMS6 1433 aa25.06■■□□□ 1.6
CHMP2A-203ENST00000597209 CAMKK2Q96RR4 588 aa25.06■■□□□ 1.6
CHMP2A-203ENST00000597209 PARD3Q8TEW0 1356 aa25.05■■□□□ 1.6
CHMP2A-203ENST00000597209 APBA3O96018 575 aa25.05■■□□□ 1.6
CHMP2A-203ENST00000597209 COG3Q96JB2 828 aa25.05■■□□□ 1.6
CHMP2A-203ENST00000597209 EZH2Q15910 746 aaKnown RBP25.03■■□□□ 1.6
CHMP2A-203ENST00000597209 CCER1Q8TC90 406 aaPredicted RBP25.03■■□□□ 1.6
CHMP2A-203ENST00000597209 BCL9O00512 1426 aa25.03■■□□□ 1.6
CHMP2A-203ENST00000597209 IP6K1Q92551 441 aa25.02■■□□□ 1.6
CHMP2A-203ENST00000597209 EXOC5O00471 708 aa25■■□□□ 1.59
CHMP2A-203ENST00000597209 ANKRD24Q8TF21 1146 aa25■■□□□ 1.59
CHMP2A-203ENST00000597209 FYB1O15117 783 aa24.99■■□□□ 1.59
CHMP2A-203ENST00000597209 MARCH10Q8NA82 808 aaPredicted RBP24.99■■□□□ 1.59
CHMP2A-203ENST00000597209 NLRP2Q9NX02 1062 aa24.99■■□□□ 1.59
CHMP2A-203ENST00000597209 SBF2Q86WG5 1849 aa24.98■■□□□ 1.59
CHMP2A-203ENST00000597209 MYOM1P52179 1685 aa24.97■■□□□ 1.59
CHMP2A-203ENST00000597209 RREB1Q92766 1687 aa24.97■■□□□ 1.59
CHMP2A-203ENST00000597209 MAP3K19Q56UN5 1328 aa24.96■■□□□ 1.59
CHMP2A-203ENST00000597209 TNS2Q63HR2 1409 aa24.95■■□□□ 1.59
CHMP2A-203ENST00000597209 FAM208AQ9UK61 1670 aaKnown RBP24.95■■□□□ 1.58
CHMP2A-203ENST00000597209 IL2RBP14784 551 aa24.94■■□□□ 1.58
CHMP2A-203ENST00000597209 BCL11BQ9C0K0 894 aaPredicted RBP24.94■■□□□ 1.58
CHMP2A-203ENST00000597209 RTL1A6NKG5 1358 aa24.93■■□□□ 1.58
CHMP2A-203ENST00000597209 PSDA5PKW4 1024 aaPredicted RBP24.93■■□□□ 1.58
CHMP2A-203ENST00000597209 PLSCR1O15162 318 aa24.93■■□□□ 1.58
CHMP2A-203ENST00000597209 HOXC9P31274 260 aa24.93■■□□□ 1.58
CHMP2A-203ENST00000597209 GGNBP2Q9H3C7 697 aa24.93■■□□□ 1.58
CHMP2A-203ENST00000597209 RGPD3A6NKT7 1758 aaPredicted RBP24.93■■□□□ 1.58
CHMP2A-203ENST00000597209 RGPD4Q7Z3J3 1758 aa24.93■■□□□ 1.58
CHMP2A-203ENST00000597209 AMPHP49418 695 aa24.92■■□□□ 1.58
CHMP2A-203ENST00000597209 EIF4G2P78344 907 aaKnown RBP eCLIP24.92■■□□□ 1.58
CHMP2A-203ENST00000597209 CARD14Q9BXL6 1004 aa24.92■■□□□ 1.58
CHMP2A-203ENST00000597209 KIF20BQ96Q89 1820 aa24.91■■□□□ 1.58
CHMP2A-203ENST00000597209 FBLN1P23142 703 aa24.91■■□□□ 1.58
CHMP2A-203ENST00000597209 NUP188Q5SRE5 1749 aa24.9■■□□□ 1.58
CHMP2A-203ENST00000597209 R3HDM1Q15032 1099 aaKnown RBP24.9■■□□□ 1.58
CHMP2A-203ENST00000597209 LRP5O75197 1615 aa24.9■■□□□ 1.58
CHMP2A-203ENST00000597209 NBPF14Q5TI25 921 aa24.88■■□□□ 1.57
CHMP2A-203ENST00000597209 NSD3Q9BZ95 1437 aa24.87■■□□□ 1.57
CHMP2A-203ENST00000597209 HSPA5P11021 654 aaKnown RBP24.87■■□□□ 1.57
CHMP2A-203ENST00000597209 LTV1Q96GA3 475 aaPredicted RBP24.87■■□□□ 1.57
CHMP2A-203ENST00000597209 KIF24Q5T7B8 1368 aa24.87■■□□□ 1.57
CHMP2A-203ENST00000597209 RRS1Q15050 365 aaKnown RBP24.86■■□□□ 1.57
CHMP2A-203ENST00000597209 PTF1AQ7RTS3 328 aa24.86■■□□□ 1.57
CHMP2A-203ENST00000597209 NHSQ6T4R5 1651 aa24.82■■□□□ 1.56
CHMP2A-203ENST00000597209 SRCAPQ6ZRS2 3230 aa24.82■■□□□ 1.56
CHMP2A-203ENST00000597209 INSRP06213 1382 aa24.81■■□□□ 1.56
CHMP2A-203ENST00000597209 CGNL1Q0VF96 1302 aa24.81■■□□□ 1.56
CHMP2A-203ENST00000597209 FLT4P35916 1363 aa24.8■■□□□ 1.56
CHMP2A-203ENST00000597209 SMG6Q86US8 1419 aaKnown RBP24.8■■□□□ 1.56
CHMP2A-203ENST00000597209 RGPD2P0DJD1 1756 aa24.8■■□□□ 1.56
CHMP2A-203ENST00000597209 KCNQ2O43526 872 aa24.79■■□□□ 1.56
CHMP2A-203ENST00000597209 PROM2Q8N271 834 aa24.79■■□□□ 1.56
CHMP2A-203ENST00000597209 NBPF6Q5VWK0 638 aa24.78■■□□□ 1.56
CHMP2A-203ENST00000597209 NBPF4Q96M43 638 aa24.78■■□□□ 1.56
CHMP2A-203ENST00000597209 HSP90AB2PQ58FF8 381 aa24.77■■□□□ 1.56
CHMP2A-203ENST00000597209 POLR3GLQ9BT43 218 aa24.77■■□□□ 1.56
CHMP2A-203ENST00000597209 ACSBG1Q96GR2 724 aa24.76■■□□□ 1.55
CHMP2A-203ENST00000597209 TXNRD1Q16881 649 aa24.75■■□□□ 1.55
CHMP2A-203ENST00000597209 ZCRB1Q8TBF4 217 aaKnown RBP24.75■■□□□ 1.55
CHMP2A-203ENST00000597209 DDX54Q8TDD1 881 aaKnown RBP24.74■■□□□ 1.55
CHMP2A-203ENST00000597209 EMILIN1Q9Y6C2 1016 aa24.74■■□□□ 1.55
CHMP2A-203ENST00000597209 MEGF6O75095 1541 aa24.74■■□□□ 1.55
CHMP2A-203ENST00000597209 ANKRD26Q9UPS8 1709 aa24.74■■□□□ 1.55
CHMP2A-203ENST00000597209 WASHC2AQ641Q2 1341 aa24.71■■□□□ 1.55
CHMP2A-203ENST00000597209 RAPGEF4Q8WZA2 1011 aa24.71■■□□□ 1.55
CHMP2A-203ENST00000597209 PANK3Q9H999 370 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms