RNA–Protein interactions for RNA: ENST00000597075.1

COLGALT1-203, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 2

Gene COLGALT1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-203ENST00000597075 SOCS7O14512 581 aa22.83■■□□□ 1.25
COLGALT1-203ENST00000597075 CHRNA2Q15822 529 aa22.83■■□□□ 1.25
COLGALT1-203ENST00000597075 TRPC5Q9UL62 973 aaPredicted RBP22.83■■□□□ 1.25
COLGALT1-203ENST00000597075 PRDM11Q9NQV5 511 aa22.82■■□□□ 1.24
COLGALT1-203ENST00000597075 CCDC9Q9Y3X0 531 aaKnown RBP22.82■■□□□ 1.24
COLGALT1-203ENST00000597075 SOX12O15370 315 aa22.81■■□□□ 1.24
COLGALT1-203ENST00000597075 PNISRQ8TF01 805 aaKnown RBP22.81■■□□□ 1.24
COLGALT1-203ENST00000597075 CFAP53Q96M91 514 aa22.81■■□□□ 1.24
COLGALT1-203ENST00000597075 COL3A1P02461 1466 aaPredicted RBP22.8■■□□□ 1.24
COLGALT1-203ENST00000597075 BCL9LQ86UU0 1499 aa22.8■■□□□ 1.24
COLGALT1-203ENST00000597075 GCP02774 474 aa22.8■■□□□ 1.24
COLGALT1-203ENST00000597075 RBM6P78332 1123 aaKnown RBP22.8■■□□□ 1.24
COLGALT1-203ENST00000597075 UNC5CLQ8IV45 518 aa22.8■■□□□ 1.24
COLGALT1-203ENST00000597075 BTG4Q9NY30 223 aa22.8■■□□□ 1.24
COLGALT1-203ENST00000597075 RTL1A6NKG5 1358 aa22.79■■□□□ 1.24
COLGALT1-203ENST00000597075 KIAA0232Q92628 1395 aa22.78■■□□□ 1.24
COLGALT1-203ENST00000597075 EMILIN1Q9Y6C2 1016 aa22.78■■□□□ 1.24
COLGALT1-203ENST00000597075 MAP3K19Q56UN5 1328 aa22.78■■□□□ 1.24
COLGALT1-203ENST00000597075 PLCH1Q4KWH8 1693 aa22.77■■□□□ 1.24
COLGALT1-203ENST00000597075 PEAK1Q9H792 1746 aa22.77■■□□□ 1.24
COLGALT1-203ENST00000597075 FBLN1P23142 703 aa22.77■■□□□ 1.24
COLGALT1-203ENST00000597075 ABCC6O95255 1503 aa22.77■■□□□ 1.24
COLGALT1-203ENST00000597075 LTN1O94822 1766 aa22.76■■□□□ 1.23
COLGALT1-203ENST00000597075 RRS1Q15050 365 aaKnown RBP22.76■■□□□ 1.23
COLGALT1-203ENST00000597075 SLIT2O94813 1529 aa22.76■■□□□ 1.23
COLGALT1-203ENST00000597075 FLT4P35916 1363 aa22.76■■□□□ 1.23
COLGALT1-203ENST00000597075 ARHGEF25Q86VW2 580 aa22.75■■□□□ 1.23
COLGALT1-203ENST00000597075 STRN4Q9NRL3 753 aa22.75■■□□□ 1.23
COLGALT1-203ENST00000597075 CPDO75976 1380 aa22.75■■□□□ 1.23
COLGALT1-203ENST00000597075 ATRNO75882 1429 aa22.74■■□□□ 1.23
COLGALT1-203ENST00000597075 GJD4Q96KN9 370 aaPredicted RBP22.74■■□□□ 1.23
COLGALT1-203ENST00000597075 COL14A1Q05707 1796 aaKnown RBP22.73■■□□□ 1.23
COLGALT1-203ENST00000597075 EVA1CP58658 441 aa22.71■■□□□ 1.23
COLGALT1-203ENST00000597075 IP6K1Q92551 441 aa22.71■■□□□ 1.23
COLGALT1-203ENST00000597075 DIAPH1O60610 1272 aaKnown RBP22.7■■□□□ 1.22
COLGALT1-203ENST00000597075 HOXC9P31274 260 aa22.7■■□□□ 1.22
COLGALT1-203ENST00000597075 AMPHP49418 695 aa22.7■■□□□ 1.22
COLGALT1-203ENST00000597075 NUDCQ9Y266 331 aa22.7■■□□□ 1.22
COLGALT1-203ENST00000597075 NWD2Q9ULI1 1742 aa22.7■■□□□ 1.22
COLGALT1-203ENST00000597075 COL18A1P39060 1754 aa22.69■■□□□ 1.22
COLGALT1-203ENST00000597075 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.69■■□□□ 1.22
COLGALT1-203ENST00000597075 A0A0G2JS52 829 aa22.69■■□□□ 1.22
COLGALT1-203ENST00000597075 MYT1Q01538 1121 aa22.69■■□□□ 1.22
COLGALT1-203ENST00000597075 VPS72Q15906 364 aa22.69■■□□□ 1.22
COLGALT1-203ENST00000597075 RGS12O14924 1447 aa22.68■■□□□ 1.22
COLGALT1-203ENST00000597075 BLMP54132 1417 aaPredicted RBP22.68■■□□□ 1.22
COLGALT1-203ENST00000597075 PPM1GO15355 546 aaPredicted RBP22.68■■□□□ 1.22
COLGALT1-203ENST00000597075 IL13P35225 146 aa22.68■■□□□ 1.22
COLGALT1-203ENST00000597075 WDR43Q15061 677 aaKnown RBP eCLIP22.68■■□□□ 1.22
COLGALT1-203ENST00000597075 FAM9BQ8IZU0 186 aa22.67■■□□□ 1.22
COLGALT1-203ENST00000597075 USP35Q9P2H5 1018 aa22.66■■□□□ 1.22
COLGALT1-203ENST00000597075 HSP90AB2PQ58FF8 381 aa22.65■■□□□ 1.22
COLGALT1-203ENST00000597075 ADAMTS8Q9UP79 889 aa22.65■■□□□ 1.22
COLGALT1-203ENST00000597075 RGPD1P0DJD0 1748 aa22.65■■□□□ 1.22
COLGALT1-203ENST00000597075 NRAPQ86VF7 1730 aa22.65■■□□□ 1.22
COLGALT1-203ENST00000597075 GLI3P10071 1580 aa22.64■■□□□ 1.22
COLGALT1-203ENST00000597075 EIF4A2Q14240 407 aaKnown RBP22.64■■□□□ 1.21
COLGALT1-203ENST00000597075 FAM98CQ17RN3 349 aaKnown RBP22.63■■□□□ 1.21
COLGALT1-203ENST00000597075 LMO7Q8WWI1 1683 aa22.62■■□□□ 1.21
COLGALT1-203ENST00000597075 CAMTA1Q9Y6Y1 1673 aa22.62■■□□□ 1.21
COLGALT1-203ENST00000597075 LARP1Q6PKG0 1096 aaKnown RBP22.61■■□□□ 1.21
COLGALT1-203ENST00000597075 SEPT12Q8IYM1 358 aa22.61■■□□□ 1.21
COLGALT1-203ENST00000597075 SPATA31A5Q5VU36 1347 aa22.59■■□□□ 1.21
COLGALT1-203ENST00000597075 SPATA31A7Q8IWB4 1347 aa22.59■■□□□ 1.21
COLGALT1-203ENST00000597075 RGPD5Q99666 1765 aa22.59■■□□□ 1.21
COLGALT1-203ENST00000597075 AXIN2Q9Y2T1 843 aa22.59■■□□□ 1.21
COLGALT1-203ENST00000597075 IGSF1Q8N6C5 1336 aa22.58■■□□□ 1.21
COLGALT1-203ENST00000597075 FCHSD2O94868 740 aa22.58■■□□□ 1.21
COLGALT1-203ENST00000597075 U2AF1L5P0DN76 240 aaPredicted RBP22.58■■□□□ 1.21
COLGALT1-203ENST00000597075 U2AF1Q01081 240 aaKnown RBP eCLIP22.58■■□□□ 1.21
COLGALT1-203ENST00000597075 PNNQ9H307 717 aaKnown RBP22.58■■□□□ 1.21
COLGALT1-203ENST00000597075 FAM208AQ9UK61 1670 aaKnown RBP22.58■■□□□ 1.2
COLGALT1-203ENST00000597075 NCAPD2Q15021 1401 aa22.57■■□□□ 1.2
COLGALT1-203ENST00000597075 CSB-PGBD3P0DP91 1061 aa22.57■■□□□ 1.2
COLGALT1-203ENST00000597075 U2SURPO15042 1029 aaKnown RBP22.56■■□□□ 1.2
COLGALT1-203ENST00000597075 SPATA31A1Q5TZJ5 1347 aa22.56■■□□□ 1.2
COLGALT1-203ENST00000597075 KDRP35968 1356 aa22.55■■□□□ 1.2
COLGALT1-203ENST00000597075 ERBB3P21860 1342 aa22.55■■□□□ 1.2
COLGALT1-203ENST00000597075 BRWD3Q6RI45 1802 aa22.54■■□□□ 1.2
COLGALT1-203ENST00000597075 NCBP3Q53F19 620 aaKnown RBP22.54■■□□□ 1.2
COLGALT1-203ENST00000597075 TOM1L2Q6ZVM7 507 aa22.54■■□□□ 1.2
COLGALT1-203ENST00000597075 NGEFQ8N5V2 710 aa22.54■■□□□ 1.2
COLGALT1-203ENST00000597075 RUNDC1Q96C34 613 aa22.54■■□□□ 1.2
COLGALT1-203ENST00000597075 EYA1Q99502 592 aa22.54■■□□□ 1.2
COLGALT1-203ENST00000597075 ANKRD24Q8TF21 1146 aa22.53■■□□□ 1.2
COLGALT1-203ENST00000597075 PLEKHF1Q96S99 279 aa22.53■■□□□ 1.2
COLGALT1-203ENST00000597075 RSPH6AQ9H0K4 717 aa22.53■■□□□ 1.2
COLGALT1-203ENST00000597075 COL5A2P05997 1499 aaPredicted RBP22.53■■□□□ 1.2
COLGALT1-203ENST00000597075 UPF1Q92900 1129 aaKnown RBP eCLIP22.52■■□□□ 1.25e-7■□□□□ 9.8
COLGALT1-203ENST00000597075 ONECUT3O60422 494 aaPredicted RBP22.51■■□□□ 1.19
COLGALT1-203ENST00000597075 LTV1Q96GA3 475 aaPredicted RBP22.51■■□□□ 1.19
COLGALT1-203ENST00000597075 FAM182BQ5T319 152 aa22.5■■□□□ 1.19
COLGALT1-203ENST00000597075 KRT27Q7Z3Y8 459 aa22.5■■□□□ 1.19
COLGALT1-203ENST00000597075 PLEKHG2Q9H7P9 1386 aa22.5■■□□□ 1.19
COLGALT1-203ENST00000597075 RGPD2P0DJD1 1756 aa22.49■■□□□ 1.19
COLGALT1-203ENST00000597075 TCP11L2Q8N4U5 519 aa22.49■■□□□ 1.19
COLGALT1-203ENST00000597075 HNRNPUQ00839 825 aaKnown RBP eCLIP22.48■■□□□ 1.19
COLGALT1-203ENST00000597075 NBPF6Q5VWK0 638 aa22.48■■□□□ 1.19
COLGALT1-203ENST00000597075 NBPF4Q96M43 638 aa22.48■■□□□ 1.19
COLGALT1-203ENST00000597075 SULT6B1Q6IMI4 303 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms