RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 AKAP12Q02952 1782 aa14.71□□□□□ -0.05
CCDC9-203ENST00000596938 PDE3BQ13370 1112 aa14.71□□□□□ -0.05
CCDC9-203ENST00000596938 FAM182BQ5T319 152 aa14.71□□□□□ -0.05
CCDC9-203ENST00000596938 TOM1L2Q6ZVM7 507 aa14.71□□□□□ -0.05
CCDC9-203ENST00000596938 DEFB132Q7Z7B7 95 aa14.7□□□□□ -0.06
CCDC9-203ENST00000596938 CARD10Q9BWT7 1032 aa14.7□□□□□ -0.06
CCDC9-203ENST00000596938 THSD7AQ9UPZ6 1657 aa14.69□□□□□ -0.06
CCDC9-203ENST00000596938 ANKRD36BQ8N2N9 1353 aa14.69□□□□□ -0.06
CCDC9-203ENST00000596938 BRWD3Q6RI45 1802 aa14.69□□□□□ -0.06
CCDC9-203ENST00000596938 NFAT5O94916 1531 aa14.68□□□□□ -0.06
CCDC9-203ENST00000596938 C11orf95C9JLR9 678 aaPredicted RBP14.68□□□□□ -0.06
CCDC9-203ENST00000596938 BAG6P46379 1132 aa14.68□□□□□ -0.06
CCDC9-203ENST00000596938 CDCA7Q9BWT1 371 aaPredicted RBP14.68□□□□□ -0.06
CCDC9-203ENST00000596938 SRCAPQ6ZRS2 3230 aa14.68□□□□□ -0.06
CCDC9-203ENST00000596938 MON2Q7Z3U7 1717 aa14.67□□□□□ -0.06
CCDC9-203ENST00000596938 CSB-PGBD3P0DP91 1061 aa14.67□□□□□ -0.06
CCDC9-203ENST00000596938 COG3Q96JB2 828 aa14.67□□□□□ -0.06
CCDC9-203ENST00000596938 FYB1O15117 783 aa14.66□□□□□ -0.06
CCDC9-203ENST00000596938 OVOS2A0A0J9YW53 1432 aa14.66□□□□□ -0.06
CCDC9-203ENST00000596938 OVOS2Q6IE36 1432 aa14.66□□□□□ -0.06
CCDC9-203ENST00000596938 COL18A1P39060 1754 aa14.65□□□□□ -0.06
CCDC9-203ENST00000596938 TRIM37O94972 964 aa14.65□□□□□ -0.06
CCDC9-203ENST00000596938 EIF4G2P78344 907 aaKnown RBP eCLIP14.65□□□□□ -0.06
CCDC9-203ENST00000596938 DDB1Q16531 1140 aa14.65□□□□□ -0.06
CCDC9-203ENST00000596938 IP6K1Q92551 441 aa14.65□□□□□ -0.06
CCDC9-203ENST00000596938 ABCC6O95255 1503 aa14.64□□□□□ -0.07
CCDC9-203ENST00000596938 ERBB3P21860 1342 aa14.64□□□□□ -0.07
CCDC9-203ENST00000596938 CCDC7Q96M83 1385 aa14.63□□□□□ -0.07
CCDC9-203ENST00000596938 EN1Q05925 392 aaPredicted RBP14.63□□□□□ -0.07
CCDC9-203ENST00000596938 ANKRD24Q8TF21 1146 aa14.63□□□□□ -0.07
CCDC9-203ENST00000596938 CARD14Q9BXL6 1004 aa14.63□□□□□ -0.07
CCDC9-203ENST00000596938 DISP2A7MBM2 1401 aa14.62□□□□□ -0.07
CCDC9-203ENST00000596938 EXOC5O00471 708 aa14.62□□□□□ -0.07
CCDC9-203ENST00000596938 NLRP2Q9NX02 1062 aa14.62□□□□□ -0.07
CCDC9-203ENST00000596938 USP54Q70EL1 1684 aa14.61□□□□□ -0.07
CCDC9-203ENST00000596938 APBA3O96018 575 aa14.61□□□□□ -0.07
CCDC9-203ENST00000596938 HSPA5P11021 654 aaKnown RBP14.61□□□□□ -0.07
CCDC9-203ENST00000596938 CAMKK2Q96RR4 588 aa14.61□□□□□ -0.07
CCDC9-203ENST00000596938 GGNBP2Q9H3C7 697 aa14.61□□□□□ -0.07
CCDC9-203ENST00000596938 MAP3K19Q56UN5 1328 aa14.61□□□□□ -0.07
CCDC9-203ENST00000596938 FBLN1P23142 703 aa14.6□□□□□ -0.07
CCDC9-203ENST00000596938 MARCH10Q8NA82 808 aaPredicted RBP14.6□□□□□ -0.07
CCDC9-203ENST00000596938 HOXC9P31274 260 aa14.59□□□□□ -0.07
CCDC9-203ENST00000596938 AMPHP49418 695 aa14.59□□□□□ -0.07
CCDC9-203ENST00000596938 IL2RBP14784 551 aa14.58□□□□□ -0.08
CCDC9-203ENST00000596938 EZH2Q15910 746 aaKnown RBP14.58□□□□□ -0.08
CCDC9-203ENST00000596938 PARD3Q8TEW0 1356 aa14.58□□□□□ -0.08
CCDC9-203ENST00000596938 OVOS2A0A0G2JMS6 1433 aa14.58□□□□□ -0.08
CCDC9-203ENST00000596938 BCL9O00512 1426 aa14.58□□□□□ -0.08
CCDC9-203ENST00000596938 PARP4Q9UKK3 1724 aaKnown RBP14.56□□□□□ -0.08
CCDC9-203ENST00000596938 RRS1Q15050 365 aaKnown RBP14.56□□□□□ -0.08
CCDC9-203ENST00000596938 BCL11BQ9C0K0 894 aaPredicted RBP14.56□□□□□ -0.08
CCDC9-203ENST00000596938 PLSCR1O15162 318 aa14.55□□□□□ -0.08
CCDC9-203ENST00000596938 LTV1Q96GA3 475 aaPredicted RBP14.55□□□□□ -0.08
CCDC9-203ENST00000596938 CGNL1Q0VF96 1302 aa14.55□□□□□ -0.08
CCDC9-203ENST00000596938 POLR3GLQ9BT43 218 aa14.54□□□□□ -0.08
CCDC9-203ENST00000596938 RTL1A6NKG5 1358 aa14.54□□□□□ -0.08
CCDC9-203ENST00000596938 KIF24Q5T7B8 1368 aa14.54□□□□□ -0.08
CCDC9-203ENST00000596938 NSD3Q9BZ95 1437 aa14.54□□□□□ -0.08
CCDC9-203ENST00000596938 RGPD1P0DJD0 1748 aa14.54□□□□□ -0.08
CCDC9-203ENST00000596938 PANK3Q9H999 370 aa14.52□□□□□ -0.09
CCDC9-203ENST00000596938 TNS2Q63HR2 1409 aa14.51□□□□□ -0.09
CCDC9-203ENST00000596938 INSRP06213 1382 aa14.51□□□□□ -0.09
CCDC9-203ENST00000596938 HSP90AB2PQ58FF8 381 aa14.51□□□□□ -0.09
CCDC9-203ENST00000596938 NBPF6Q5VWK0 638 aa14.51□□□□□ -0.09
CCDC9-203ENST00000596938 PTF1AQ7RTS3 328 aa14.51□□□□□ -0.09
CCDC9-203ENST00000596938 NBPF4Q96M43 638 aa14.51□□□□□ -0.09
CCDC9-203ENST00000596938 RGPD5Q99666 1765 aa14.51□□□□□ -0.09
CCDC9-203ENST00000596938 LRRC37A3O60309 1634 aa14.51□□□□□ -0.09
CCDC9-203ENST00000596938 PEAK1Q9H792 1746 aa14.5□□□□□ -0.09
CCDC9-203ENST00000596938 PSDA5PKW4 1024 aaPredicted RBP14.5□□□□□ -0.09
CCDC9-203ENST00000596938 R3HDM1Q15032 1099 aaKnown RBP14.5□□□□□ -0.09
CCDC9-203ENST00000596938 NBPF14Q5TI25 921 aa14.5□□□□□ -0.09
CCDC9-203ENST00000596938 FLT4P35916 1363 aa14.49□□□□□ -0.09
CCDC9-203ENST00000596938 LTN1O94822 1766 aa14.49□□□□□ -0.09
CCDC9-203ENST00000596938 TNS1Q9HBL0 1735 aaKnown RBP14.49□□□□□ -0.09
CCDC9-203ENST00000596938 KCNQ2O43526 872 aa14.48□□□□□ -0.09
CCDC9-203ENST00000596938 PROM2Q8N271 834 aa14.48□□□□□ -0.09
CCDC9-203ENST00000596938 ZCRB1Q8TBF4 217 aaKnown RBP14.48□□□□□ -0.09
CCDC9-203ENST00000596938 EMILIN1Q9Y6C2 1016 aa14.48□□□□□ -0.09
CCDC9-203ENST00000596938 WASHC2AQ641Q2 1341 aa14.47□□□□□ -0.09
CCDC9-203ENST00000596938 MYOM1P52179 1685 aa14.47□□□□□ -0.09
CCDC9-203ENST00000596938 DDX54Q8TDD1 881 aaKnown RBP14.47□□□□□ -0.09
CCDC9-203ENST00000596938 POLKQ9UBT6 870 aa14.47□□□□□ -0.09
CCDC9-203ENST00000596938 SMG6Q86US8 1419 aaKnown RBP14.47□□□□□ -0.09
CCDC9-203ENST00000596938 RAPGEF4Q8WZA2 1011 aa14.46□□□□□ -0.09
CCDC9-203ENST00000596938 PPM1GO15355 546 aaPredicted RBP14.45□□□□□ -0.1
CCDC9-203ENST00000596938 ACSBG1Q96GR2 724 aa14.45□□□□□ -0.1
CCDC9-203ENST00000596938 TXNRD1Q16881 649 aa14.44□□□□□ -0.1
CCDC9-203ENST00000596938 NSD2O96028 1365 aa14.44□□□□□ -0.1
CCDC9-203ENST00000596938 KIF7Q2M1P5 1343 aa14.43□□□□□ -0.1
CCDC9-203ENST00000596938 WNK3Q9BYP7 1800 aa14.43□□□□□ -0.1
CCDC9-203ENST00000596938 TATP17735 454 aaPredicted RBP14.43□□□□□ -0.1
CCDC9-203ENST00000596938 USHBP1Q8N6Y0 703 aa14.43□□□□□ -0.1
CCDC9-203ENST00000596938 KNSTRNQ9Y448 316 aa14.43□□□□□ -0.1
CCDC9-203ENST00000596938 TNNT2P45379 298 aaPredicted RBP14.42□□□□□ -0.1
CCDC9-203ENST00000596938 FAM208AQ9UK61 1670 aaKnown RBP14.42□□□□□ -0.1
CCDC9-203ENST00000596938 PRIM1P49642 420 aaKnown RBP14.41□□□□□ -0.1
CCDC9-203ENST00000596938 MORC1Q86VD1 984 aa14.41□□□□□ -0.1
CCDC9-203ENST00000596938 EYA1Q99502 592 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms