RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 DISP2A7MBM2 1401 aa24.07■■□□□ 1.44
CCDC9-202ENST00000595659 CD163L1Q9NR16 1453 aa24.07■■□□□ 1.44
CCDC9-202ENST00000595659 DDB1Q16531 1140 aa24.06■■□□□ 1.44
CCDC9-202ENST00000595659 RGPD1P0DJD0 1748 aa24.06■■□□□ 1.44
CCDC9-202ENST00000595659 TESK2Q96S53 571 aa24.04■■□□□ 1.44
CCDC9-202ENST00000595659 TERF2IPQ9NYB0 399 aa24.04■■□□□ 1.44
CCDC9-202ENST00000595659 AKAP12Q02952 1782 aa24.03■■□□□ 1.44
CCDC9-202ENST00000595659 USP31Q70CQ4 1352 aa24.03■■□□□ 1.44
CCDC9-202ENST00000595659 TNS1Q9HBL0 1735 aaKnown RBP24.02■■□□□ 1.44
CCDC9-202ENST00000595659 COL18A1P39060 1754 aa24.02■■□□□ 1.44
CCDC9-202ENST00000595659 CARD10Q9BWT7 1032 aa24.02■■□□□ 1.44
CCDC9-202ENST00000595659 A0A1W2PP64 1363 aa24.02■■□□□ 1.44
CCDC9-202ENST00000595659 NFAT5O94916 1531 aa24.01■■□□□ 1.43
CCDC9-202ENST00000595659 PTF1AQ7RTS3 328 aa23.99■■□□□ 1.43
CCDC9-202ENST00000595659 MARCH10Q8NA82 808 aaPredicted RBP23.99■■□□□ 1.43
CCDC9-202ENST00000595659 PUS7Q96PZ0 661 aaKnown RBP23.99■■□□□ 1.43
CCDC9-202ENST00000595659 OVOS2A0A0G2JMS6 1433 aa23.98■■□□□ 1.43
CCDC9-202ENST00000595659 OVOS2A0A0J9YW53 1432 aa23.98■■□□□ 1.43
CCDC9-202ENST00000595659 OVOS2Q6IE36 1432 aa23.98■■□□□ 1.43
CCDC9-202ENST00000595659 EDC4Q6P2E9 1401 aaKnown RBP23.98■■□□□ 1.43
CCDC9-202ENST00000595659 CDCA7Q9BWT1 371 aaPredicted RBP23.97■■□□□ 1.43
CCDC9-202ENST00000595659 NLRP2Q9NX02 1062 aa23.97■■□□□ 1.43
CCDC9-202ENST00000595659 MON2Q7Z3U7 1717 aa23.96■■□□□ 1.43
CCDC9-202ENST00000595659 PARP4Q9UKK3 1724 aaKnown RBP23.96■■□□□ 1.43
CCDC9-202ENST00000595659 PARD3Q8TEW0 1356 aa23.96■■□□□ 1.43
CCDC9-202ENST00000595659 C11orf95C9JLR9 678 aaPredicted RBP23.94■■□□□ 1.42
CCDC9-202ENST00000595659 EXOC5O00471 708 aa23.94■■□□□ 1.42
CCDC9-202ENST00000595659 LRRC37A3O60309 1634 aa23.93■■□□□ 1.42
CCDC9-202ENST00000595659 ANKRD24Q8TF21 1146 aa23.93■■□□□ 1.42
CCDC9-202ENST00000595659 PCGF6Q9BYE7 350 aa23.93■■□□□ 1.42
CCDC9-202ENST00000595659 ERBB3P21860 1342 aa23.92■■□□□ 1.42
CCDC9-202ENST00000595659 FBLN1P23142 703 aa23.92■■□□□ 1.42
CCDC9-202ENST00000595659 NBPF14Q5TI25 921 aa23.92■■□□□ 1.42
CCDC9-202ENST00000595659 BCL11BQ9C0K0 894 aaPredicted RBP23.92■■□□□ 1.42
CCDC9-202ENST00000595659 USP47Q96K76 1375 aa23.91■■□□□ 1.42
CCDC9-202ENST00000595659 CCDC7Q96M83 1385 aa23.91■■□□□ 1.42
CCDC9-202ENST00000595659 LTV1Q96GA3 475 aaPredicted RBP23.9■■□□□ 1.42
CCDC9-202ENST00000595659 RGPD5Q99666 1765 aa23.9■■□□□ 1.42
CCDC9-202ENST00000595659 SLC24A1O60721 1099 aa23.89■■□□□ 1.41
CCDC9-202ENST00000595659 TMF1P82094 1093 aa23.89■■□□□ 1.41
CCDC9-202ENST00000595659 COG3Q96JB2 828 aa23.89■■□□□ 1.41
CCDC9-202ENST00000595659 PEAK1Q9H792 1746 aa23.88■■□□□ 1.41
CCDC9-202ENST00000595659 NINLQ9Y2I6 1382 aa23.88■■□□□ 1.41
CCDC9-202ENST00000595659 PLSCR1O15162 318 aa23.87■■□□□ 1.41
CCDC9-202ENST00000595659 IP6K1Q92551 441 aa23.87■■□□□ 1.41
CCDC9-202ENST00000595659 LRP5O75197 1615 aa23.86■■□□□ 1.41
CCDC9-202ENST00000595659 KCNQ2O43526 872 aa23.86■■□□□ 1.41
CCDC9-202ENST00000595659 IL2RBP14784 551 aa23.86■■□□□ 1.41
CCDC9-202ENST00000595659 ACSBG1Q96GR2 724 aa23.86■■□□□ 1.41
CCDC9-202ENST00000595659 ABCC6O95255 1503 aa23.85■■□□□ 1.41
CCDC9-202ENST00000595659 PROM2Q8N271 834 aa23.85■■□□□ 1.41
CCDC9-202ENST00000595659 ANKRD36BQ8N2N9 1353 aa23.84■■□□□ 1.41
CCDC9-202ENST00000595659 MAP3K19Q56UN5 1328 aa23.84■■□□□ 1.41
CCDC9-202ENST00000595659 AMPHP49418 695 aa23.83■■□□□ 1.41
CCDC9-202ENST00000595659 GGNBP2Q9H3C7 697 aa23.83■■□□□ 1.41
CCDC9-202ENST00000595659 ANO8Q9HCE9 1232 aaPredicted RBP23.83■■□□□ 1.41
CCDC9-202ENST00000595659 TNS2Q63HR2 1409 aa23.83■■□□□ 1.4
CCDC9-202ENST00000595659 BCL9O00512 1426 aa23.82■■□□□ 1.4
CCDC9-202ENST00000595659 USP54Q70EL1 1684 aa23.82■■□□□ 1.4
CCDC9-202ENST00000595659 RREB1Q92766 1687 aa23.82■■□□□ 1.4
CCDC9-202ENST00000595659 FYB1O15117 783 aa23.81■■□□□ 1.4
CCDC9-202ENST00000595659 HOXC9P31274 260 aa23.81■■□□□ 1.4
CCDC9-202ENST00000595659 NUP188Q5SRE5 1749 aa23.81■■□□□ 1.4
CCDC9-202ENST00000595659 RRS1Q15050 365 aaKnown RBP23.8■■□□□ 1.4
CCDC9-202ENST00000595659 TXNRD1Q16881 649 aa23.79■■□□□ 1.4
CCDC9-202ENST00000595659 WNK3Q9BYP7 1800 aa23.79■■□□□ 1.4
CCDC9-202ENST00000595659 DDX54Q8TDD1 881 aaKnown RBP23.78■■□□□ 1.4
CCDC9-202ENST00000595659 CDCA8Q53HL2 280 aa23.77■■□□□ 1.4
CCDC9-202ENST00000595659 LTN1O94822 1766 aa23.77■■□□□ 1.4
CCDC9-202ENST00000595659 PDGFDQ9GZP0 370 aaPredicted RBP23.76■■□□□ 1.39
CCDC9-202ENST00000595659 TIMELESSQ9UNS1 1208 aa23.75■■□□□ 1.39
CCDC9-202ENST00000595659 SPON1Q9HCB6 807 aa23.74■■□□□ 1.39
CCDC9-202ENST00000595659 SBF2Q86WG5 1849 aa23.74■■□□□ 1.39
CCDC9-202ENST00000595659 CARD14Q9BXL6 1004 aa23.73■■□□□ 1.39
CCDC9-202ENST00000595659 POLR3GLQ9BT43 218 aa23.72■■□□□ 1.39
CCDC9-202ENST00000595659 PPP1R1BQ9UD71 204 aaPredicted RBP23.72■■□□□ 1.39
CCDC9-202ENST00000595659 USHBP1Q8N6Y0 703 aa23.71■■□□□ 1.39
CCDC9-202ENST00000595659 STK32BQ9NY57 414 aa23.71■■□□□ 1.39
CCDC9-202ENST00000595659 CLSPNQ9HAW4 1339 aa23.7■■□□□ 1.38
CCDC9-202ENST00000595659 ZBTB7AO95365 584 aa23.7■■□□□ 1.38
CCDC9-202ENST00000595659 NBPF6Q5VWK0 638 aa23.7■■□□□ 1.38
CCDC9-202ENST00000595659 NBPF4Q96M43 638 aa23.7■■□□□ 1.38
CCDC9-202ENST00000595659 SLC15A2Q16348 729 aa23.68■■□□□ 1.38
CCDC9-202ENST00000595659 HSP90AB2PQ58FF8 381 aa23.68■■□□□ 1.38
CCDC9-202ENST00000595659 SYTL4Q96C24 671 aaPredicted RBP23.67■■□□□ 1.38
CCDC9-202ENST00000595659 ATF5Q9Y2D1 282 aaPredicted RBP23.67■■□□□ 1.38
CCDC9-202ENST00000595659 NSD3Q9BZ95 1437 aa23.67■■□□□ 1.38
CCDC9-202ENST00000595659 ZCRB1Q8TBF4 217 aaKnown RBP23.66■■□□□ 1.38
CCDC9-202ENST00000595659 CCER1Q8TC90 406 aaPredicted RBP23.66■■□□□ 1.38
CCDC9-202ENST00000595659 RTL1A6NKG5 1358 aa23.65■■□□□ 1.38
CCDC9-202ENST00000595659 RGPD3A6NKT7 1758 aaPredicted RBP23.65■■□□□ 1.38
CCDC9-202ENST00000595659 RGPD4Q7Z3J3 1758 aa23.65■■□□□ 1.38
CCDC9-202ENST00000595659 PRIM1P49642 420 aaKnown RBP23.64■■□□□ 1.37
CCDC9-202ENST00000595659 EMILIN1Q9Y6C2 1016 aa23.64■■□□□ 1.37
CCDC9-202ENST00000595659 MEGF6O75095 1541 aa23.64■■□□□ 1.37
CCDC9-202ENST00000595659 PPM1GO15355 546 aaPredicted RBP23.63■■□□□ 1.37
CCDC9-202ENST00000595659 LRRC4BQ9NT99 713 aa23.63■■□□□ 1.37
CCDC9-202ENST00000595659 NHSQ6T4R5 1651 aa23.63■■□□□ 1.37
CCDC9-202ENST00000595659 KCNQ4P56696 695 aa23.61■■□□□ 1.37
CCDC9-202ENST00000595659 RAPGEF4Q8WZA2 1011 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms