RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 SBNO2Q9Y2G9 1366 aa22.74■■□□□ 1.23
GTF2F1-203ENST00000594213 PLSCR1O15162 318 aa22.73■■□□□ 1.23
GTF2F1-203ENST00000594213 CARD10Q9BWT7 1032 aa22.73■■□□□ 1.23
GTF2F1-203ENST00000594213 PEAK1Q9H792 1746 aa22.72■■□□□ 1.23
GTF2F1-203ENST00000594213 PTF1AQ7RTS3 328 aa22.72■■□□□ 1.23
GTF2F1-203ENST00000594213 MARCH10Q8NA82 808 aaPredicted RBP22.72■■□□□ 1.23
GTF2F1-203ENST00000594213 CDCA7Q9BWT1 371 aaPredicted RBP22.72■■□□□ 1.23
GTF2F1-203ENST00000594213 RREB1Q92766 1687 aa22.71■■□□□ 1.23
GTF2F1-203ENST00000594213 KTN1Q86UP2 1357 aaKnown RBP22.71■■□□□ 1.23
GTF2F1-203ENST00000594213 BCL9O00512 1426 aa22.71■■□□□ 1.23
GTF2F1-203ENST00000594213 BCL11BQ9C0K0 894 aaPredicted RBP22.7■■□□□ 1.22
GTF2F1-203ENST00000594213 NFAT5O94916 1531 aa22.69■■□□□ 1.22
GTF2F1-203ENST00000594213 USP31Q70CQ4 1352 aa22.69■■□□□ 1.22
GTF2F1-203ENST00000594213 SOX12O15370 315 aa22.69■■□□□ 1.22
GTF2F1-203ENST00000594213 NUP188Q5SRE5 1749 aa22.68■■□□□ 1.22
GTF2F1-203ENST00000594213 PROM2Q8N271 834 aa22.67■■□□□ 1.22
GTF2F1-203ENST00000594213 CARD11Q9BXL7 1154 aa22.67■■□□□ 1.22
GTF2F1-203ENST00000594213 LRRC37A3O60309 1634 aa22.67■■□□□ 1.22
GTF2F1-203ENST00000594213 CD163L1Q9NR16 1453 aa22.66■■□□□ 1.22
GTF2F1-203ENST00000594213 AKAP12Q02952 1782 aa22.66■■□□□ 1.22
GTF2F1-203ENST00000594213 CSB-PGBD3P0DP91 1061 aa22.65■■□□□ 1.22
GTF2F1-203ENST00000594213 NME9Q86XW9 330 aa22.64■■□□□ 1.21
GTF2F1-203ENST00000594213 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.64■■□□□ 1.21
GTF2F1-203ENST00000594213 SLC12A5Q9H2X9 1139 aa22.64■■□□□ 1.21
GTF2F1-203ENST00000594213 ANO8Q9HCE9 1232 aaPredicted RBP22.64■■□□□ 1.21
GTF2F1-203ENST00000594213 EXOC5O00471 708 aa22.63■■□□□ 1.21
GTF2F1-203ENST00000594213 CCDC7Q96M83 1385 aa22.63■■□□□ 1.21
GTF2F1-203ENST00000594213 ABCC6O95255 1503 aa22.62■■□□□ 1.21
GTF2F1-203ENST00000594213 KCNQ2O43526 872 aa22.62■■□□□ 1.21
GTF2F1-203ENST00000594213 PUS7Q96PZ0 661 aaKnown RBP22.62■■□□□ 1.21
GTF2F1-203ENST00000594213 SPON1Q9HCB6 807 aa22.62■■□□□ 1.21
GTF2F1-203ENST00000594213 ERBB3P21860 1342 aa22.59■■□□□ 1.21
GTF2F1-203ENST00000594213 TMC1Q8TDI8 760 aa22.59■■□□□ 1.21
GTF2F1-203ENST00000594213 HDGFL2Q7Z4V5 671 aaPredicted RBP22.58■■□□□ 1.21
GTF2F1-203ENST00000594213 SBF2Q86WG5 1849 aa22.58■■□□□ 1.21
GTF2F1-203ENST00000594213 RGPD3A6NKT7 1758 aaPredicted RBP22.58■■□□□ 1.2
GTF2F1-203ENST00000594213 RGPD4Q7Z3J3 1758 aa22.58■■□□□ 1.2
GTF2F1-203ENST00000594213 MON2Q7Z3U7 1717 aa22.57■■□□□ 1.2
GTF2F1-203ENST00000594213 EDC4Q6P2E9 1401 aaKnown RBP22.57■■□□□ 1.2
GTF2F1-203ENST00000594213 TXNRD1Q16881 649 aa22.56■■□□□ 1.2
GTF2F1-203ENST00000594213 TESK2Q96S53 571 aa22.56■■□□□ 1.2
GTF2F1-203ENST00000594213 PDGFDQ9GZP0 370 aaPredicted RBP22.56■■□□□ 1.2
GTF2F1-203ENST00000594213 TNS2Q63HR2 1409 aa22.56■■□□□ 1.2
GTF2F1-203ENST00000594213 RGPD5Q99666 1765 aa22.55■■□□□ 1.2
GTF2F1-203ENST00000594213 NLRP2Q9NX02 1062 aa22.55■■□□□ 1.2
GTF2F1-203ENST00000594213 TERF2IPQ9NYB0 399 aa22.55■■□□□ 1.2
GTF2F1-203ENST00000594213 USP54Q70EL1 1684 aa22.55■■□□□ 1.2
GTF2F1-203ENST00000594213 WNK3Q9BYP7 1800 aa22.54■■□□□ 1.2
GTF2F1-203ENST00000594213 A0A1W2PP64 1363 aa22.54■■□□□ 1.2
GTF2F1-203ENST00000594213 TONSLQ96HA7 1378 aa22.54■■□□□ 1.2
GTF2F1-203ENST00000594213 ANKRD24Q8TF21 1146 aa22.53■■□□□ 1.2
GTF2F1-203ENST00000594213 IL2RBP14784 551 aa22.52■■□□□ 1.2
GTF2F1-203ENST00000594213 PPP1R1BQ9UD71 204 aaPredicted RBP22.51■■□□□ 1.19
GTF2F1-203ENST00000594213 NINLQ9Y2I6 1382 aa22.5■■□□□ 1.19
GTF2F1-203ENST00000594213 IP6K1Q92551 441 aa22.5■■□□□ 1.19
GTF2F1-203ENST00000594213 ST20-MTHFSA0A0A6YYL1 179 aa22.49■■□□□ 1.19
GTF2F1-203ENST00000594213 SLC15A2Q16348 729 aa22.49■■□□□ 1.19
GTF2F1-203ENST00000594213 PTGER2P43116 358 aa22.48■■□□□ 1.19
GTF2F1-203ENST00000594213 ACSBG1Q96GR2 724 aa22.48■■□□□ 1.19
GTF2F1-203ENST00000594213 STK32BQ9NY57 414 aa22.48■■□□□ 1.19
GTF2F1-203ENST00000594213 ZBTB7AO95365 584 aa22.47■■□□□ 1.19
GTF2F1-203ENST00000594213 CASZ1Q86V15 1759 aa22.47■■□□□ 1.19
GTF2F1-203ENST00000594213 SLC24A1O60721 1099 aa22.44■■□□□ 1.18
GTF2F1-203ENST00000594213 MAP3K19Q56UN5 1328 aa22.43■■□□□ 1.18
GTF2F1-203ENST00000594213 SGIP1Q9BQI5 828 aa22.43■■□□□ 1.18
GTF2F1-203ENST00000594213 ATF5Q9Y2D1 282 aaPredicted RBP22.43■■□□□ 1.18
GTF2F1-203ENST00000594213 FBLN1P23142 703 aa22.42■■□□□ 1.18
GTF2F1-203ENST00000594213 YY1P25490 414 aa22.42■■□□□ 1.18
GTF2F1-203ENST00000594213 COG3Q96JB2 828 aa22.41■■□□□ 1.18
GTF2F1-203ENST00000594213 NHSQ6T4R5 1651 aa22.41■■□□□ 1.18
GTF2F1-203ENST00000594213 HOXC9P31274 260 aa22.4■■□□□ 1.18
GTF2F1-203ENST00000594213 MTFR1LQ9H019 292 aa22.4■■□□□ 1.18
GTF2F1-203ENST00000594213 LRRC4BQ9NT99 713 aa22.4■■□□□ 1.18
GTF2F1-203ENST00000594213 LTV1Q96GA3 475 aaPredicted RBP22.39■■□□□ 1.17
GTF2F1-203ENST00000594213 LTN1O94822 1766 aa22.39■■□□□ 1.17
GTF2F1-203ENST00000594213 ANKRD36BQ8N2N9 1353 aa22.38■■□□□ 1.17
GTF2F1-203ENST00000594213 ZNF827Q17R98 1081 aa22.37■■□□□ 1.17
GTF2F1-203ENST00000594213 DDX54Q8TDD1 881 aaKnown RBP22.37■■□□□ 1.17
GTF2F1-203ENST00000594213 DCAF8L1A6NGE4 600 aa22.36■■□□□ 1.17
GTF2F1-203ENST00000594213 FYB1O15117 783 aa22.36■■□□□ 1.17
GTF2F1-203ENST00000594213 AMPHP49418 695 aa22.36■■□□□ 1.17
GTF2F1-203ENST00000594213 AKT1S1Q96B36 256 aa22.35■■□□□ 1.17
GTF2F1-203ENST00000594213 SYT17Q9BSW7 474 aa22.35■■□□□ 1.17
GTF2F1-203ENST00000594213 PAPPAQ13219 1627 aa22.35■■□□□ 1.17
GTF2F1-203ENST00000594213 FHDC1Q9C0D6 1143 aaPredicted RBP22.34■■□□□ 1.17
GTF2F1-203ENST00000594213 UTRNP46939 3433 aa22.33■■□□□ 1.17
GTF2F1-203ENST00000594213 SLC27A3Q5K4L6 730 aa22.33■■□□□ 1.17
GTF2F1-203ENST00000594213 PRIM1P49642 420 aaKnown RBP22.32■■□□□ 1.16
GTF2F1-203ENST00000594213 TMF1P82094 1093 aa22.32■■□□□ 1.16
GTF2F1-203ENST00000594213 ZCRB1Q8TBF4 217 aaKnown RBP22.32■■□□□ 1.16
GTF2F1-203ENST00000594213 RTL1A6NKG5 1358 aa22.31■■□□□ 1.16
GTF2F1-203ENST00000594213 USP47Q96K76 1375 aa22.31■■□□□ 1.16
GTF2F1-203ENST00000594213 RRS1Q15050 365 aaKnown RBP22.31■■□□□ 1.16
GTF2F1-203ENST00000594213 NBPF6Q5VWK0 638 aa22.31■■□□□ 1.16
GTF2F1-203ENST00000594213 NBPF4Q96M43 638 aa22.31■■□□□ 1.16
GTF2F1-203ENST00000594213 GGNBP2Q9H3C7 697 aa22.31■■□□□ 1.16
GTF2F1-203ENST00000594213 MYOM1P52179 1685 aa22.3■■□□□ 1.16
GTF2F1-203ENST00000594213 BTAF1O14981 1849 aa22.3■■□□□ 1.16
GTF2F1-203ENST00000594213 NSD2O96028 1365 aa22.29■■□□□ 1.16
GTF2F1-203ENST00000594213 ARXQ96QS3 562 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms